Carassius gibelio (silver crucian carp): 127941673
Help
Entry
127941673 CDS
T08819
Name
(RefSeq) nuclear pore complex protein Nup85-like
KO
K14304
nuclear pore complex protein Nup85
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
127941673
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgib03019
]
127941673
03036 Chromosome and associated proteins [BR:
cgib03036
]
127941673
Messenger RNA biogenesis [BR:
cgib03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
127941673
Chromosome and associated proteins [BR:
cgib03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
127941673
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
P2_Phage_GpR
Motif
Other DBs
NCBI-GeneID:
127941673
NCBI-ProteinID:
XP_052392981
LinkDB
All DBs
Position
A3:29416065..29423360
Genome browser
AA seq
649 aa
AA seq
DB search
MEEVDEEPSPTLIPSAGFHQRHLGFEWGPGDLLVYETNYRLQGPRSAGSPFVHIVRRDED
ICSPILRKLFNESHLIFVGLQKIREDVPSKNKKSQFVSVSKNYRSVIRACMEELQQNAVS
TQDGSLASQYGDQVSILLAIELIWNLCEVLFIDAAPAGSLLLQLLDWVRLHKSDVDTRAR
EVLQSENPALHRSYWDVVISLVLQGRMDEARQVLSKQASLRPESSSVFKRMDVLLQSMPI
FNPTGAQTLTEFDVRWRQWHEECDRCLQDNTFAGNRHLETLVKVLLGDEDTLLEQKELLG
TWYHFLVTRMLFTQPTIKPPDLHYYAQSSMNMFLGPRASPEPLDIILLSAFEFDLHQVIK
DCSIALNNWWFVAHLTDLLDHCKLLQSHNLHFGSNLREFLVLEYASGLFTHHSLWQLAVD
YFDHCPEFGRVYLELQIERVPLDTERKAVKVLRICEDRQMSEQVRSICKIMAKRALRNNR
LGSALSWSIRAKDAAFATLISERFLQDYCNRGSFTDLDLLDNLGPAMLLSDRLTFLGKYR
EFHRLYGENRFSEAARLLLSLMTARIAPRGLWMTLLTDALPLLEQKEVIFSVDQTYELMS
CLEELNSGTKASNTTDQDEDIESTKTELLRLALARNLAMAIVKEGTIET
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggtggatgaagagcccagtcccacgctgattccaagcgctggatttcatcag
aggcatttgggttttgagtggggtcctggagatctgctggtgtatgagaccaactaccga
ctgcaaggtccgaggtctgcaggctctccgttcgtccacatcgtgaggagagatgaagac
atctgctctcccatcctgcgcaaactcttcaacgagtcccatctcatcttcgtggggctg
cagaagatcagagaggacgttcccagcaagaacaagaagtcacagtttgtgagcgtcagt
aagaactacaggtctgtgatccgagcctgtatggaggagctgcagcagaacgcagtttca
acacaagatggttctttagcgtcgcagtatggagatcaggtgtctatcctcttggcgatc
gagctcatatggaacttgtgtgaggttctgttcatcgacgcggctccagccgggtctctg
ctgctgcagctgctggattgggtgcgtctgcacaagtcagacgtggacacgagagcgcga
gaggtgttacagagcgaaaaccccgctctgcatcgctcctactgggacgtggtgatcagt
ttagtcctgcagggccgcatggatgaagcccgtcaggtgctgtccaaacaggcgtctctt
cggcccgagagcagctctgtgttcaaacgcatggacgtcctgttacagagcatgcccatc
tttaatcccacaggagctcagacgctgactgagtttgatgtcagatggagacagtggcac
gaggagtgtgaccgctgtcttcaagacaacaccttcgctgggaaccgtcacctggagacc
ctggtgaaggtcctgctgggtgatgaagacacgttactggagcagaaggagctgctgggc
acctggtatcacttcctggtcacacggatgctcttcactcagcccaccatcaaaccgccc
gacctgcactactacgcacaatcgagcatgaacatgtttctgggtccacgggcgtctccg
gagcctctggacatcatcctgctgtcggccttcgagttcgacctgcatcaggtgatcaaa
gactgcagcatcgcgctcaacaactggtggttcgtggctcatctgacagatctgctggat
cactgcaaactcctgcagtcgcacaacctccattttgggtctaatctgcgtgagtttctg
gttttggagtacgcctcgggtctcttcacacatcacagtctgtggcagctggcggtggat
tatttcgatcactgtcctgagttcggccgtgtgtatctggagctgcagatcgagagagtc
ccgctcgacactgaacgtaaagctgttaaagtcctgcggatctgtgaggaccgacagatg
agtgaacaggtgcgcagtatctgtaagatcatggctaaaagagctctgaggaacaaccgc
ctgggatctgctctgtcctggagcatccgagccaaagatgctgcgttcgctacactcatc
tctgagaggtttcttcaggattactgtaacagaggctctttcacggacctggatttgttg
gataatctgggtcctgccatgctgctcagtgacagactcacgtttttaggaaagtaccgc
gagtttcacaggctctacggtgagaaccgtttctccgaggcagccagactcctgctgtcc
ctgatgacggctaggatcgcccctcgcggtctgtggatgacgctgctgaccgacgcgctg
ccgctgctggagcagaaagaggtgatcttctccgtggatcagacgtatgagctcatgtcc
tgtctggaggagctgaactcaggaaccaaagcctcgaacaccacagaccaggatgaagac
atcgagtccacgaagacggagctcctgcgactggctctggctcgtaacctggccatggcc
atcgtcaaagagggaacaatagaaacataa
DBGET
integrated database retrieval system
