Carassius gibelio (silver crucian carp): 127941726
Help
Entry
127941726 CDS
T08819
Name
(RefSeq) pre-mRNA-splicing factor RBM22-like isoform X1
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127941726
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cgib03041
]
127941726
Spliceosome [BR:
cgib03041
]
Complex B
Other components
Prp19-related factors
127941726
Complex C
127941726
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
Torus
zf_CCCH_4
Nup35_RRM_2
RRM_occluded
zf-CCCH_2
RRM_3
zf-CCCH
RRM_YTH1
zf-CCCH_4
RRM_7
zf-CCCH_10
zf-CCCH_12
Calcipressin
RRM_PARP14_3
zf-CCCH_PARP12
Motif
Other DBs
NCBI-GeneID:
127941726
NCBI-ProteinID:
XP_052393046
LinkDB
All DBs
Position
A21:complement(16349464..16358586)
Genome browser
AA seq
426 aa
AA seq
DB search
MATSLGSNTYNRQNWEDSDFPILCQTCLGENPYIRMTKEKFGKECKICARPFTVFRWCPG
VRMRFKKTEVCQTCSKMKNVCQTCLLDLEYGLPIQVRDTGLSVKDEVPRSDVNKEYYTQN
MEREIANSDGTRPVGLLGKAPSSSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECP
YRHEKPTDPDDPLADQNIKDRFYGINDPVADKLLKRATTMPRLDIPEDKSITTLYIGGLG
EDVTDSELRNHFYQFGEIRTITIVQRQQCAFIQFATRQAAETAAEKSFNKLIINGRRLNV
KWGRSQAARGKENEKDGVTESGIRLEPVPGLPGALPLPPVSDEDAPTNYFNLVPTNSPAV
MNLGLPPPPGVAMPPPPGFGPPMFHAMDPMAPPMPPPMAMRPPGQVHYPSQDPQRMGAHA
SRHGGP
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgtctctaggatctaacacgtataacaggcaaaactgggaagattcggatttt
cccattctttgtcaaacatgcttgggagaaaacccttacatacggatgaccaaagagaaa
ttcggcaaggagtgcaagatctgtgcacgtcccttcacggtgttccgctggtgtcctggg
gtcaggatgcgctttaagaagacagaagtgtgtcagacctgcagtaaaatgaagaatgtc
tgtcaaacctgccttctggatcttgaatatggtttgcccattcaggttcgtgacactggg
ctgtccgttaaagatgaagtaccaagatcagatgtgaataaggagtattacactcagaat
atggagagagagattgctaactctgatggcacaagacccgtggggctgctcgggaaggca
cccagcagcagcgatatgctgctgaaactagctcgtaccacaccatattacaagaggaac
agaccacacatctgttccttctgggtgaagggggagtgtaagagaggggaagagtgtccg
tacaggcatgaaaagcccacggatccagatgacccattggctgatcagaatattaaagac
cgtttctatggcattaatgatcctgtggctgacaaacttctgaagcgggcaaccaccatg
cccagactggacataccggaggacaagtctatcaccacactctatatcggagggctggga
gaagacgttacagattctgagctcaggaatcacttctaccagtttggggagattcgtacc
atcaccatcgttcaaaggcagcagtgtgctttcatccagtttgctacacggcaggccgca
gagacggctgcagagaagtcctttaataaactcatcattaatggacgtcggcttaatgtt
aaatggggcaggtcacaggcggctcgaggaaaggagaacgagaaagatggggtgacggag
agtggaatcaggctggagccggtgcccggcctccctggtgctctgcccctaccccctgtg
tctgatgaagatgcccccaccaattacttcaacctggttcccaccaactcccctgctgtc
atgaacctgggacttcctcctccacctggggttgccatgcccccaccacctggttttggt
cctcctatgttccatgctatggatcccatggccccgccaatgccccctccaatggccatg
aggccccccggacaggtccactacccatcccaagatcctcagcggatgggtgcccatgca
agtcgtcatggaggcccttaa
DBGET
integrated database retrieval system
