Carassius gibelio (silver crucian carp): 127941774 Help Entry 127941774         CDS       T08819                                  Name (RefSeq) probable helicase senataxin   KO K10706   ATP-dependent RNA/DNA helicase, senataxin [EC:5.6.2.5 5.6.2.3] Organism cgib  Carassius gibelio (silver crucian carp) Brite KEGG Orthology (KO) [BR:cgib00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:cgib03021]     127941774 Enzymes [BR:cgib01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      127941774     5.6.2.5  RNA 5'-3' helicase      127941774 Transcription machinery [BR:cgib03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      127941774 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  AAA_11 AAA_12 SEN1_N AAA_19 AAA_30 Viral_helicase1 UvrD-helicase AAA_22 AAA_16 ResIII nSTAND3 Helicase_RecD Motif Other DBs NCBI-GeneID:  127941774 NCBI-ProteinID:  XP_052393125 LinkDB All DBs Position A21:2973654..2991820 Genome browser AA seq 2419 aa AA seqDB search MEKCLWCTTSLEVEGDVAIVTMLRRYSSGQLSEREMDSLNEDLSCCLECVVEYHRARDKV PDLHKRLWEMEKARLMHLLGTVLDKELEEDDIFIIEDDHEEPVSKISPAELHDRLRFPLF EVLKFPYLLCHRDLCDLVVKALCKLQDMKQSLTVFEKYQGTYLLLVHPNEQVRRWAIDTA KTMKSVDRDAYYDLQEIFFCMFYVIELGISLDFPDLEPESYAGGTVQMLPSHLYDSQNKK NYWLGICMLLTQLSADAMDSLFMGQFNIPLCILNTMEGLKNEDNPASDPFWPALHCFMVI LDRLGSKIWGQVDPNMAFQTITGAASYVAEIRNIQKKTMRGMVKVEPEYDDNMVTCSQMV YDCYASEKPNQASGSLSNSGISSNYMIYEDMQSLVTVLDSEMGQSMRVYGSTFLWFIPFV RSIMELPELNASYISEVIHYLCDKIRENRHMLTGQTSVCDKVTEFFTRILIQIVELHSAE GRMGILSRCAQKWVQEIVLCIILSDEPHAPPDRMGGFHGVSSTSYNLGMVGRQPASGGGI GAIIPGCMKLIRLLLKEGIRRSVPGSTLFFNRLMQLRGVANKRWNLTRSESDELQKCLLK VVRLMPERPDSPLSVVPSSCAPSVEAATNTVISRNSVPTLHQQQHEDQEAGPSRAGDAAA FIKEEPLWNYGNNISEVLCSGLEKIAKVKKEPPDPVSVSKLRTPVQLERIKPDLGKVQEI RSRLNDNQNLSKIKAIAKQKPDESLKPFPLTSVKVEGGFGAAEEEDDDDEPLDVRRTSLI KSVNHKVESSDSEIDSSAVGKTPNRSMGSSKPHVESSTIVISDSDSDNDEGPNDVLRSPE DHVLPESPGRDYDDLSESQVFEFETQQYVPSSWDTSDFDASVLTKPKSDQLLKPQVDKAP CEASPSSETELIPDEDIERTCQQAEDKIIEQQQQPQELVDSSASSRSKASSTAESWDKFV KPKPLDQIKEPQQPQEPADSCAPSLSKASSTAESWDKFVKPKPLDQIKEPQQPQEPADSC APSLSKASSTAESWDKFGKPKPLDQIKEPQQPQEPADSCAPSLSKASSTAESWDKFGKPK PLLVKSAKTTPSDKKKPLIIDALALKIRGHPWKRNSTSQDEEEPSSSTTPSCGTSSSPSS SCVSSPYFPAPSSRGTPAIVPPKKVRKVVEPESTAERLGLKKKERKAFELSQRSLDCVAK LRCHGQKVQVEPQQKIRRVRRVTKTTSQKRIVKGNKKLMGSQDIQFFKQIREKHQRPTTL ASKPAKINQPAEVHLPEHTVASSEAGDFFPYPQLDPDNENAESEIRSKGDWVGSDKRIES KYFQASETADVNQEEKPSLTSEDDDDEEWMVLTQTGPTDMELCSQMEPLEEDELFLTQRD PVDMDIDPDSEPDTPEQPVLTPKPIQTPIGGNDDHLFLKPSMSPMSQKKAKPSTTKIYTP SSRSASLVHEMEKVAKPLVANVAKAKIPRLAPAMPPAKTFQPLQPPQLPKPLPSQQSPYA PLLVPSTKISSTPDPPSYKVYQRPEAPVNKPVPATDQSPKFDLLFLTQAILKWDYRMLDN YKAFGSPNDLCQLPLKKVPVMFPSYMEYFNTLYPLLQINAFEEIASEWLKEGRVKCHLSV QGIEYSNRTASANFTASISQEIDTKQLYPKESDLVILWLPDNTGAYAHNEPHFHEPHPHF GYVSRSSVSNRGPGSKLTLNLTIQTRGNVSSVNSQPVLCEVIGSLISTFREFNALCSLRN GPMLRPLLNPHASYFTHTLDSPSDLDSPEFNRDQARAIACGLAMIKRTHKTPRFLLIHGP PGTGKSKTIGGLLYKLLSSGINSAAPVGNLHSKSRRTRVLLCAPSNAAIDSLMKKVILIF KDKCRNINAPQGNCGDINLVRLGNERTMSKALKPFSLDYQTKARAQRAQQTVEADINRRK EQLDQNIDNLSKRCAKTKKDSSEFKTLMEQKLQFLKEREGLSRRIKECWIKRQESQAFVL QNAHVICCTLSTSGSTVLESTFRRLGNEMFSCVIIDEASQAKETETLIPMMYRSPSVILV GDPNQLPPTVVSQKAKEFGYDQSLMARLCRSLCQSNPQPSPILLLSVQYRMHPEICEFPS KYIYNSALKDDCETAQKRCSPSWPFKPYKVFDVTDGMEKKERGSFSNSKEVKLVLLLLKL LVKKPSDRVGVITPYNAQKQCILEAIRSSGLDKQLQVDVDTVDGFQGKEKDCIIVSCVRA SSETGSIGFVGNRQRMNVTITRAKLSLFILGHLRTLREQSDWGALIEDARRRKSIIKTMQ NDYESDVRQILKSEREPPTCSLSFPPISSTVTTPVIHAAVETGPAPMPVPQRDMSNMPRL IPLECPNNPRINERPRDPRFAEPRPIREQIPDRDGRGFPGSRRSTNRANSCEADSRRTGH CSRYSSKHSSSSPSKRHRR NT seq 7260 nt NT seq  +upstreamnt  +downstreamnt atggagaagtgtctgtggtgcaccacgtccctggaggtggagggagacgtggcgatcgtc accatgttgcgtcgctacagctccggacagctgtctgagcgagagatggactctctgaat gaagacctcagctgctgtctggagtgtgtggtggagtatcatcgagccagagacaaggtc cctgatctgcacaagcgtttgtgggaaatggagaaggctcgactcatgcatttgttggga accgttctagacaaggagctggaggaggacgatatctttattatcgaagatgaccacgag gagccggtgtcgaagatctctcctgcagaattgcacgaccgcctccgtttcccgctgttt gaagttctgaagttcccgtacctgctttgccaccgtgatctgtgtgatttggtggtaaaa gccttgtgtaagctgcaggatatgaagcagtctttgactgtgtttgagaagtatcaagga acctatctgcttctcgttcatcccaacgaacaggtgcgccgttgggcaatcgatacagca aagaccatgaagagtgtggatcgggatgcctactatgaccttcaggagattttcttttgc atgttttatgtcattgagcttggaatatctttggacttcccagatttggagccagagtct tatgcagggggcactgtacaaatgctgccctctcacctctatgattcacaaaataagaag aactactggctaggtatctgtatgttactaacacagctcagcgctgatgcaatggactcc ctgttcatgggacagtttaacatcccactttgcatactcaacacaatggaggggttgaaa aatgaggacaatccagcttctgacccattctggccagcccttcactgttttatggtaatt ctggaccgacttggttctaagatctggggtcaggttgaccctaatatggctttccagaca atcactggagcagccagctatgttgcggaaataaggaacatacagaaaaaaaccatgcgg ggcatggttaaagtggagcctgaatatgatgacaatatggtgacttgcagtcagatggtg tatgactgttatgcctccgaaaaaccaaaccaagcatctggttcgttgtccaacagtggt atttccagcaactatatgatctatgaggatatgcagtctcttgtcaccgtgcttgattct gaaatgggccagagcatgcgtgtatacggaagcacttttctatggttcattccatttgtc cgttccataatggaacttccagagctcaacgcttcctatattagtgaagtcatccactat ctttgtgataagatacgagaaaatcgacacatgctaaccggacagacaagcgtgtgcgat aaagtgaccgagttcttcactcgtattcttattcaaattgttgagctacattctgctgaa gggcgaatgggaatactttctcgctgtgcccaaaagtgggtgcaagagattgtcttatgc attatcctatcggatgaaccacatgcgccaccagacaggatgggtgggtttcacggagtc agttcaacctcatacaaccttgggatggtcggaagacagcctgcatctggaggtggcatt ggtgccataattcctggctgcatgaaactgattcgactactgctgaaagaagggataagg agatctgtcccaggctcaaccctcttttttaatcggcttatgcaattgcgtggagttgca aacaaacgatggaatctaacgcgttctgaatctgatgagcttcaaaagtgtttgttgaaa gttgtccggttaatgccagaaagacctgattctccactctctgttgttccatcctcatgt gcaccatcagtggaggcagctacaaacactgttatttccagaaattcagtaccaaccctg catcagcaacaacatgaggaccaggaggcaggaccaagcagagcaggagatgcagctgct tttatcaaagaggagccactttggaattatggaaataatatctctgaggttctatgcagc ggtcttgaaaaaattgcaaaggttaagaaagaaccccctgacccagtgtcagtttcaaag ctgagaacacctgttcagttggaacgtattaaaccagatctgggtaaagtgcaggaaatt agatccagattaaacgacaaccaaaatttgtcaaagatcaaagccattgccaaacaaaaa cctgatgagtccttaaaaccttttcccttgacatcagttaaagtggaaggtggttttgga gctgctgaggaggaggatgatgacgatgaaccccttgatgtcagacgaaccagtttgata aaatctgtcaaccacaaagttgaatctagcgattccgaaattgacagtagtgctgttgga aaaactcctaaccggtccatgggcagctcaaagccacatgtggagtccagtaccattgtc atctccgattctgattctgataatgatgaagggccaaatgacgtcctaaggtctccagaa gatcatgtcttgcctgagagcccgggtcgtgattatgatgatctcagtgaatcacaggtc tttgagtttgagacgcagcaatatgtgccatcttcttgggatacttcagattttgatgca tcagtcttgacgaaaccaaaatcagaccaactactcaaaccacaggtggataaagctccc tgtgaagcgtctccaagttcagagactgaactaattccagatgaggacattgagaggacc tgtcagcaagcagaagataagatcatagaacagcagcagcagccgcaagagctggtggat tcaagtgcatcgtcacggtccaaagcatccagtactgcagagagctgggataaatttgta aaaccaaaacctctggatcagatcaaagaaccgcagcagccacaagagccagcggattca tgtgcaccgtcactgtccaaagcatccagtactgcagagagctgggataaatttgtaaaa ccaaaacctctggatcagatcaaagaaccgcagcagccacaagagccagcggattcctgt gcaccgtcactgtccaaagcatccagtactgcagagagctgggataaatttggaaaacca aaacctctggatcagatcaaagaaccgcagcagccacaagagccagcggattcctgtgca ccgtcactgtccaaagcatccagtactgcagaaagctgggataaatttggcaaaccaaaa cctttgctggttaaaagtgcaaaaacaactccatctgataagaaaaagccactgataatt gatgcccttgctcttaaaatcaggggccacccttggaaacgcaactccacatctcaggac gaagaggaaccttcctcttcaaccactccgtcatgtggtacatcttcctctccatcatcc agctgtgtttcttcaccttattttcctgcccccagttcacgtggcacccctgccattgtt cctccaaagaaagtgcgcaaagttgttgagccagaatcaacagcagagcgtttgggatta aaaaagaaggaaaggaaagcctttgaactttctcagcgttcgctggattgtgttgctaaa ctgaggtgccatggtcagaaagtgcaggtagaaccacaacagaaaataaggcgagtgcgt cgagtcactaagacaacttcacagaaacgtattgtaaaaggcaacaagaaacttatgggt tcacaagatattcagtttttcaagcaaattcgtgagaagcatcagaggccaacaacatta gcttccaaaccagcaaagatcaatcagccagctgaagtgcacttgccagaacatacagtt gcaagcagtgaagctggtgatttctttccctatcctcagctggatcctgataacgaaaat gccgaatccgaaatccgttctaaaggtgattgggttggaagtgataagagaatagaatcc aagtacttccaagccagtgagactgctgatgtaaaccaggaagaaaaaccttctctgaca tcggaggacgatgatgatgaagaatggatggtcctcactcagacgggacccactgatatg gaactgtgctcccaaatggagccattggaggaagatgaactctttcttacccagagagat ccagttgacatggacattgatccagatagtgaaccggataccccagagcaaccagtgttg acacctaaacctatacagactcctattggtggaaatgatgatcatttgttcttgaagcct agcatgtcacctatgtctcagaaaaaggccaaaccttctaccacaaaaatatacaccccc agctcccgcagtgcctcacttgtccatgaaatggaaaaagtagctaagcctcttgttgct aatgttgcaaaagcgaagattccccgactggccccagcaatgccacctgcaaaaacattt caacctctccagcctccacaactcccaaagccacttccttcacaacaatctccttatgct cctttgttggtccctagtactaaaataagctctaccccagatccaccatcttacaaggta taccaaagacctgaggctccagttaacaaaccagtacctgcaacggatcagagcccgaag tttgaccttttgttcttgacccaagcaatccttaaatgggattataggatgcttgacaac tacaaagcatttgggagtccaaatgatctatgccaactaccgctgaagaaggtgccagtt atgtttcccagctacatggagtacttcaacaccttgtatcccctgctgcaaattaatgca tttgaagagattgctagtgaatggctcaaagagggccgagtcaagtgtcacctaagtgtc cagggtatagaatacagcaatcgcacagctagtgccaacttcacggcaagcatttctcag gaaatcgatacgaaacaactatacccaaaagaaagtgaccttgtgatactttggttgccg gacaacaccggagcatatgcccataatgaacctcatttccatgaaccacatcctcatttc ggttatgtgtcccggtccagtgtttctaacagaggtccaggttccaagttaaccctaaac ttgacgattcaaactcgtggtaatgtatcttcggtgaattcccaacctgtactctgtgaa gttattgggtcattgatcagcactttccgggagttcaatgcactgtgttcgctacgaaat ggaccaatgttgcgacctcttcttaatccacatgcgtcttatttcacacacactctggac agcccatcggacctggattcacctgagttcaacagggaccaggcgagagcaatagcttgt ggtcttgccatgataaagagaacgcataagaccccaagatttctccttattcatggtcct ccaggaaccgggaagagtaaaaccattggtggcctgttgtacaaacttctgtcttcgggt attaacagtgctgctcctgtggggaaccttcactcaaagtctcgaaggacccgtgttctt ctctgtgcaccctcaaacgctgccatcgacagtctgatgaagaaagtcattttgatcttt aaagataaatgccgaaacatcaatgctcctcaaggtaactgcggtgacataaacctggta cgattgggaaatgaaaggaccatgtcgaaggcactaaaacctttcagcctcgactaccag actaaagctagagcacagagagcccagcaaactgtagaagctgacataaacaggcggaaa gagcaactagaccaaaacattgacaatctctccaagcgatgtgcaaagacgaagaaggat tcttctgaattcaagacgttgatggagcagaagttgcagtttctgaaggagagagaagga ctgagtcggcggattaaagagtgttggattaagcgacaggaaagtcaagcttttgtgttg caaaatgctcatgtgatctgctgcacgctcagcaccagtggaagtactgtcctcgagagc actttccgtcgtctcggaaatgaaatgtttagctgtgtcatcatcgatgaggctagtcag gctaaagaaactgagactctgattcccatgatgtaccgaagtccttctgtaatccttgtt ggtgatcccaaccagcttccaccaacggttgtctcccagaaagctaaggaatttggctac gaccaatctcttatggcaaggttatgcagaagtctttgtcagtcaaacccgcaaccctct cccatcctcctgctcagcgtacagtaccgcatgcacccagaaatctgtgaattcccctca aagtacatctacaacagcgctctcaaggatgactgtgagacggctcagaagcgctgttcc cccagctggcccttcaagccctacaaagtgttcgatgttactgatgggatggaaaagaag gagagaggttccttttcaaacagcaaagaggtcaagttggtcttgctgctgttgaagctg ctggtcaagaagccgtccgatcgagtgggtgtcatcacaccctacaacgcccagaagcaa tgcatactggaagccatcaggagttcaggcctcgacaaacaacttcaggttgatgtggat actgtagatggctttcagggcaaagaaaaggactgcataattgtgtcttgcgtgagagcc agcagtgaaactggttccattgggtttgtgggaaatcgtcagagaatgaacgtaaccatt acaagagccaaattaagtctcttcatactgggacatctacgcacactcagggaacaaagt gattggggagctttgattgaggatgctaggaggcgtaaatctataatcaaaaccatgcaa aacgattatgaaagtgacgtcaggcagattcttaaatcagaacgagagccgccgacttgc agtctctcttttcccccaatcagcagcactgtgaccacacctgttatacatgcagctgtg gaaacaggtcccgcccctatgcccgtcccccagcgcgacatgagcaacatgccgcggcta atacctctagaatgcccaaataacccacggatcaatgaaaggcccagagacccacggttt gcagagccacggccaatcagagaacagataccagacagagatgggcggggcttccccggg tcacgccgctcaacaaacagagctaattcatgtgaagctgactctagacgtactggccat tgttccagatattcttcaaaacacagcagttcttcaccttcaaaacgacacaggagataa

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