Carassius gibelio (silver crucian carp): 127942024
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Entry
127942024 CDS
T08819
Name
(RefSeq) transcription factor COE1-A-like isoform X1
KO
K09103
early B-cell factor
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgib03000
]
127942024
Transcription factors [BR:
cgib03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
127942024
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GFIT
Motif
Pfam:
COE1_DBD
COE1_HLH
TIG
HLH
Motif
Other DBs
NCBI-GeneID:
127942024
NCBI-ProteinID:
XP_052393501
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Position
A21:17667074..17788110
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AA seq
603 aa
AA seq
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MFGIQESIQRSGSILKEEPIGAGMNAVRTWMQGAGVLDANTAAQSGVGLARAHFEKQPPS
NLRKSNFFHFVLALYDRQGQPVEIERTSFVGFVEKEKETTGEKTNNGIHYRLQLLYSNGI
RTEQDFYVRLIDSMTKQAIIYEGQDKNPEMCRVLLTHEIMCSRCCDKKSCGNRNETPSDP
VIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVVSTTVSVEGHVLAVSDNMFVHNNSKH
GRRARRLDPSEGTASYLEHAAPCIKAISPSEGWTTGGATVIIIGDNFFDGLQVIFGTMLV
WSELITPHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGTPGRFIYTALNEPTIDYGFQRLQ
KVIPRHPGDPERLPKEVILKRAADLVEALYGMPHNNQEIILKRAADIAEALYNVPRNHNQ
LTGLTNSSVHASMMGVNSFTGQLAINVSESSQGGNQGFSRNTSSVSPHGYVPSSTPQQSS
YSSVSTSMNGYGNSSMTNLTGSPSFLNGSAANSPYAIVPSSPTMASSTSLPSNCSSSSGI
FSFSPANMVSAVKQKSAFAPVVRPQSSPPPTCTSTNGNGLQDQSFVDSNKYSTASALQGL
AFS
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgtttgggattcaggagagcatccaaaggagtgggagtattttgaaagaggagcccatc
ggagccggcatgaacgcagtccgaacatggatgcaaggcgccggggtgctggatgcgaac
acggccgcgcagagtggagtgggactggcccgggcgcacttcgagaaacagccgccctca
aatctccgcaaatccaacttcttccacttcgttttagccctttatgaccgacaaggacag
ccggtggaaattgagagaacctcttttgtcggatttgtggaaaaagagaaggagactaca
ggagaaaagacaaacaatggcattcattacagactgcaacttctctacagcaacggcatc
agaacagagcaggatttttatgtaagactaattgactccatgactaaacaggccataata
tatgaaggtcaagacaagaacccagagatgtgccgtgtgctcctgactcatgaaatcatg
tgcagtcgttgttgtgacaaaaagagttgtgggaaccgcaacgagacaccctccgatccc
gtcatcatcgacagattttttctcaaatttttcctgaaatgcaatcagaactgcctgaag
aatgcaggaaatccacgggacatgcggcgctttcaggtggttgtgtcgacgacagtgagc
gtagaaggacacgttctggctgtttcggacaatatgtttgtgcacaacaactccaaacat
ggcagaagagctcgtcggctggacccgtcggagggaacggcgtcatacctggagcacgct
gcaccttgtatcaaagccattagtcccagtgaaggctggacaacaggaggtgctactgtc
atcatcattggagacaacttctttgacggactgcaggtcatcttcggcaccatgttggtc
tggagtgagctcatcacacctcatgccatcagagttcagacccctcctcgtcacatcccc
ggagtggtagaggtcacgctttcctataagtccaaacagttttgcaaaggcacaccagga
agattcatctacacagctctgaatgaacccaccatagactatgggtttcagcggttacag
aaggtgatacctcggcatccaggagaccctgaacgcttgccaaaggaagtgattttaaag
agagcagcagatctggtggaagccctttatggaatgcctcataataaccaggaaatcatt
cttaagcgagcagcggacattgctgaagccctttacaatgtgccacgaaaccacaaccag
ctgaccggcctcaccaacagctctgtccatgcgagcatgatgggggtgaactccttcact
ggacagctcgccattaacgtctcagaatcctctcagggtggaaaccagggtttcagtcgt
aatacgagtagcgtatcaccacacggttacgtgcccagttccacccctcagcagagcagt
tacagttcagtatccaccagcatgaatggctacggcaacagcagcatgaccaacctgacc
ggctccccgagcttcctgaacggctctgctgccaactcaccatacgcaatcgtcccctcc
agtcccaccatggcctcctccaccagcctgccctcaaactgcagcagctcctctggaatc
ttttccttctctccggcaaacatggtttcagctgtgaaacagaagagtgcgttcgctcca
gtcgttcggccccaatcctcacctccaccgacatgcaccagcaccaatgggaatggtctc
caagatcagtcttttgtcgactctaacaagtactccacagccagcgcgctccagggcctg
gccttctcctga
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