Carassius gibelio (silver crucian carp): 127942026
Help
Entry
127942026 CDS
T08819
Name
(RefSeq) transcription elongation regulator 1-like
KO
K12824
transcription elongation regulator 1
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127942026
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cgib03041
]
127942026
Spliceosome [BR:
cgib03041
]
Complex A
U1 snRNP components
U1 related factors
127942026
Complex B
127942026
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FF
WW_TCERG1
WW
RhoGAP-FF1
FF_RHG35_4th
CAAD
Motif
Other DBs
NCBI-GeneID:
127942026
NCBI-ProteinID:
XP_052393507
LinkDB
All DBs
Position
A21:17928111..17947905
Genome browser
AA seq
1003 aa
AA seq
DB search
MMAENTDGESAGLGENRMVLQQALHFHSPAPPPTTVLRGPPPLLRPPPPPFGMMRGPPPP
PRPPFGRPPFDTNMPPIPPPGALPPPIGPPHLQRPPFMPPPMGNMPPPMGNMPPPPGMIF
PPGMPPSPGTGSVSSMTSEEIWVENTTPEGKVYYYNARTRESAWTKPEGVKIIQQSELNP
LKAAQSGGAAAAPNTAASTPASSATTVVSEPVSIQSLSPTYTLSTSPDPSTSPAPTASQS
STTVSEMPPVASTPPASVGVTSVAVVSVPTVTATVTAVQTMPLMHQSLPPGLPMAQPAPA
IPAFPPVMVPPFRVPLPGMHIPLPGMLPGMAPPLVPMMHPQLAITASPASLMGALPLPEW
SEYKTADGKMYYYNNRTLESTWEKPAELKERDKDRDKAKDGHNNDSVLKNIDMEAKADNF
GISKELPREEEMTEEEKAALKAKPVATNPIPGTPWCVVWTGDDRVFYYNPTTRLSMWDRP
EELVGRADVDKYIQEPSHKRGVDDNKKIGFNKEDIDTAIEDTLDDEPSKAKKRKTDGMKE
ADAEKDVAMEAELKAARDRALVPLEARMNQFRDMLLERGVSAFSTWDKELHKIVFDPRYL
LLNPRERKQVFDQYVKTRAEEERKEKKNKLMQAKDDFRKMMEDAKLHMRTTFSEFAAKHS
KDPRFKAIEKMKDREAIFTEFMTALRKKDKEDSKNKVEKVKQDFFDLLTDHHVDVSQRWG
KVKDKVETDPRYKAVESSAAREELYKQYVEKQAKNVDAEKEKELERQARIEASLRERERE
VQRARSEQTKEIDREREQHKREEAVQHFRALMSDMVRSTDASWSETRRNLRKDHRWESAA
LLERHEKEKLFEEHVEALTKKKKEHFRQLLDETSMITLTTTWKEVKKIIKDDPRCIKFSS
SDRKKQREFEDYIKDKYITAKADFRTLLKETKFITYRSRKLIQDSDQHLKDIEKVLQNDK
RFLVLDCVPEERHKLIMFYIEDLDRRGPPPPPTASEPSRRSTK
NT seq
3012 nt
NT seq
+upstream
nt +downstream
nt
atgatggcggagaacacagacggagagagtgctggactcggggagaacaggatggtgtta
cagcaggctttacattttcatagccctgctccaccacctaccacagttttgcgaggacct
ccaccattactacgacccccgcctccaccctttggcatgatgagaggacccccaccaccc
cctagacccccttttggcagaccaccgtttgacaccaatatgccacctatacccccacct
ggagctttgcccccacccattggacccccacacctgcagaggccaccgttcatgccccca
ccaatgggtaacatgccccctccaatgggtaacatgccccctcctcctggtatgatcttt
ccacctggaatgcctccatcgccaggaactggatcggtttcaagcatgactagtgaggaa
atctgggtagagaacaccacaccagaaggaaaggtatattactacaatgctcggacacgt
gagtcagcctggaccaaaccagagggagtaaagatcatccagcagtcggagctcaatcct
ctaaaggcagctcagtccggaggagctgcagcagcacctaacaccgctgcctctactcca
gcaagcagtgcaactacagttgtgtccgagccggtctccattcagagcctgtcccccacc
tacaccctcagcaccagccctgaccccagcaccagtccagcccccactgcctctcaatcc
tccaccactgtttctgagatgcctccagtggcctccacacctcctgcaagtgtaggtgtg
acctctgttgccgtggtcagtgttcctacagtaactgctacagtcactgcagtgcagaca
atgccgcttatgcatcaaagtctccctcctggcctgcccatggcccagccggctcctgca
atcccagcatttcccccggtcatggtacctccattcagagtgcctctacctggcatgcac
atcccactgcctggtatgctcccagggatggcccctcctcttgtacccatgatgcatccc
cagctagctatcactgcatctcctgcatctcttatgggggctctaccacttccggaatgg
tctgagtacaaaacagctgatgggaagatgtattattataacaatcgcactcttgaatcc
acctgggaaaaacctgctgagctaaaagagagagataaggaccgtgacaaggctaaagat
ggccataacaacgattcagttttaaagaatatagacatggaagccaaagcggacaacttt
ggcatttctaaagagttgcccagggaagaagagatgacagaggaagaaaaagcagcacta
aaggcaaaacctgtcgccacaaacccaattcctggtactccctggtgtgtagtctggact
ggagatgaccgtgtgttttactacaatcccaccacacgactgtccatgtgggaccgacct
gaggagctagtgggtcgtgctgatgtggacaaatacattcaagaaccctcccacaaaagg
ggggtagatgacaacaagaaaataggtttcaacaaagaggatatcgacacagccatagaa
gacaccctggatgatgagccttctaaggctaagaagagaaagacggacggtatgaaggag
gctgacgcagagaaagacgtggccatggaggccgaactgaaggctgctcgtgatcgggcc
ctggtgcccctggaggcccgcatgaaccagttcagggacatgctgctggagagaggggtt
tcagccttttccacttgggacaaagagctgcacaagattgtgtttgatcctcgatatttg
ctgctcaaccccagagagaggaaacaggtgttcgatcagtacgtgaagactcgtgctgaa
gaggagaggaaggagaagaagaataaactcatgcaggctaaagatgacttcaggaagatg
atggaagatgccaaacttcacatgaggaccacattcagtgagtttgcagcaaaacactct
aaggatcctcgcttcaaggccattgagaagatgaaggacagagaggccatattcacagag
ttcatgacagccttgagaaagaaggacaaagaagactccaaaaacaaagtagaaaaggtg
aagcaggacttcttcgatttactgacagaccaccatgtggacgtctctcagcgctggggc
aaagtgaaggacaaggtggagacggacccacgctacaaagccgtggagagctcagctgct
agagaagaactgtacaaacagtatgtggagaaacaggcgaagaatgtggacgcagagaag
gagaaagagctggaacggcaggctcgtatcgaggccagtctgagggagagagagcgggag
gtgcagagagctcgatctgaacaaaccaaagagattgaccgagagcgagagcagcataaa
cgagaggaagctgtccagcactttagagcactcatgtcagatatggttaggtcaacggat
gcttcctggtcagaaacgaggcgcaatctgcgtaaagaccaccgctgggagtctgctgct
ctgcttgagcgacatgagaaggagaaattgtttgaagaacatgtggaggctcttaccaag
aagaagaaggaacatttcaggcaactgttggatgagacctccatgatcaccctaacaacc
acgtggaaggaagtgaagaagatcatcaaagatgacccacgctgcatcaagttctccagc
agtgatcgaaagaaacaacgggaatttgaagattacataaaggacaaatatatcacagcc
aaagctgacttcagaactctcctgaaagaaaccaaattcatcacgtatagatcacggaag
ttgatccaagattcagaccagcacttaaaagatattgagaaagtccttcaaaatgataaa
cgtttcctggtcctagactgcgtcccagaagaacgccacaaactcatcatgttctacatt
gaggacttggaccgccggggacccccacctcccccaactgcctcagaacccagccgccgc
tccacaaagtga
DBGET
integrated database retrieval system
