Carassius gibelio (silver crucian carp): 127942044
Help
Entry
127942044 CDS
T08819
Name
(RefSeq) transient receptor potential cation channel subfamily C member 2b
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cgib04040
]
127942044
Ion channels [BR:
cgib04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
127942044
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
PKD_channel
Ank_2
Motif
Other DBs
NCBI-GeneID:
127942044
NCBI-ProteinID:
XP_052393531
LinkDB
All DBs
Position
A21:15140752..15148028
Genome browser
AA seq
1038 aa
AA seq
DB search
MMENLTPEQWREIVNKKFRFPPELLGAIREGNVNMVYSLLRTGDGIIRQLDDSEDRLWRE
ALNLSIRLGNEDTMDTLLQGVKFDFRKIHEALLVAVDTNQPRVVKRLLDQLDLEKGNKMD
VRSFSMAIFDHSIDDSQFAPGVTPLTLACQKDLYDIVTMLNQKGHEIPWPHKISCICLEC
TNGRQYDLLKFSLSRINTYRGIASRAYLSITADDAMLSAFRLSRDLRKLSKKEPEFKPQY
LALEQLCQEFAVELLGMCRNQSEVTTILNSLVDQDGDSEDEFDQQAFEEGIPNLARLRLA
VNYNQKQFVAHPICQQVLSSIWCGKLSGWRGSRTAWKLLVSFGIFLTMPVLCLIYWIAPK
SKLGKILKIPVIKFLLHSASYMWFLITLLGESIAMEVYRDSFASREQTILHNSFHMIWVV
GFFWFECKEIWIEGLRSYFLDWWNCLDVMVLSMYLASFALRVVIMLKVHFLCQTPDKQDE
CVYFTETLRDEWHQEDPQFIAEVLFAVTSMLSFTRLAYILPADESLGTLQISIGKMIDDM
MRFMFILVIIGTAFLCGINNIYVPYMITPNLGRLNETFSFLFWTMFGMADQTYVDMPEFV
LAEFVGRILYGIYTLIIVIVLLNMLIAMITNSFQKIEDDADVEWKFARSKLYLSYFREGL
TMPVPFNIIPSPKALFYLLRGIFRRICCCCFNCNSAPDYPPLTSMDDVGPAENRIPYRQQ
VIRALVQRYIESARREFEETKRKDVGNRITELSKVIGQLHAEMKQIQTNVFDYSDNTKGD
PSGGSSFLGKYILGAKNNFRGFNSNERKTVPLHEPLHHEQPALGTVEEKEEETADMQESP
AADTESDRKSNEEQNGEGETDNAVEDMNETDGGGDEGDMETGNNDVTDISMEAGAEKNTS
ETVIDIEANTDAESEARAKREDEMMVEEETSDNEEELNEEATGGKDLDDAETEKNIEVEE
SNEMTEDVVEVINENAGEGIKINLSQTSLVSFLAKRIEEKLERNFTFIGNQVSSPTGSDD
SQDTGFGSQVFDLSTSSP
NT seq
3117 nt
NT seq
+upstream
nt +downstream
nt
atgatggaaaacctcacgccagaacaatggcgcgagatcgtgaacaagaagtttcgcttc
cctccggagctcctgggggccatccgagagggcaacgtgaacatggtctattctctgctg
aggacgggtgacgggatcatccgccagctggacgactctgaggacaggctatggagagaa
gcactgaacctgtccatccgactgggcaatgaggacaccatggacacccttctccaaggg
gtcaagtttgacttccggaagatccacgaagctcttcttgtggctgtggacaccaaccag
cctcgtgtggtcaagcgcctcctggaccagcttgatctggagaagggaaacaagatggat
gtgcgctcattctcaatggccatttttgaccactccattgacgattctcagtttgcccct
ggagtgacacccttgacactggcctgtcagaaggatctgtatgacattgtgacgatgctc
aatcagaaaggtcacgaaattccttggccgcataaaatctcatgcatatgtctggagtgc
acaaatggacgccaatatgatttgctcaagttctcgctgtctcgtatcaacacctaccga
ggtatcgccagccgtgcctatctgtccatcaccgcagatgatgccatgctcagtgccttt
cgactcagccgggatctccgcaagctgtcaaaaaaggaacctgaattcaagcctcagtat
ctcgccctggagcagctgtgccaggagtttgccgtggagctgctcggaatgtgccggaac
caaagtgaggtcaccaccatcctaaacagtcttgtggatcaggatggagacagcgaggac
gagtttgaccagcaggcgttcgaggagggcattccaaacctggctcgcctaaggcttgcc
gtcaactataatcaaaaacaatttgtagcccacccgatctgccagcaggtgctttcctcc
atctggtgtggcaaactatcaggctggaggggcagcagaacagcctggaagctcttggtg
tcgtttgggatcttcctgaccatgcccgtcctttgcctcatctactggatcgcaccaaag
tcaaagttggggaagattctgaagatcccagtgattaaattccttctccattcggcatca
tatatgtggttcctgatcacgcttctgggggaatctattgccatggaggtgtaccgggac
agctttgcctctcgtgagcagaccatcctgcacaactccttccacatgatctgggtggtt
ggttttttctggttcgagtgtaaggaaatttggatcgagggcttgaggagttatttccta
gactggtggaactgtctggatgtgatggttctcagcatgtacctggcttcattcgccctg
agagtggtcatcatgctcaaggtccatttcctctgccagacacctgacaaacaggatgag
tgtgtctacttcaccgagactttgcgtgatgagtggcatcaggaggatccccagttcatc
gctgaggtgctgtttgcagtgaccagcatgctgagtttcactcgcctggcctacatcctt
ccagcagacgagtctcttggcaccctgcagatctccattggaaagatgattgacgacatg
atgagatttatgttcattttggtgatcattggaactgccttcctgtgtggcatcaacaat
atctacgtcccatatatgattacaccaaatcttggaaggttaaatgaaaccttcagcttc
ctcttctggaccatgtttgggatggccgaccagacctatgtggacatgccggagtttgtt
ttggcggagtttgttggcagaatcctttatggcatctacactctgatcattgtcattgta
cttctaaacatgctcatcgctatgatcaccaactcttttcagaagattgaggatgatgct
gatgtagagtggaaatttgcccgttcaaagctctacctgagttatttcagagaaggactg
actatgcctgtccctttcaacatcatcccctctccaaaggcccttttctatcttttaaga
ggaattttcagacgtatctgctgctgttgcttcaactgtaactctgctccagactaccct
ccacttacatctatggatgacgtgggtccagcggagaaccgtattccctatagacagcag
gtcatccgcgcgctggttcagcgctacatcgaatctgccaggagagagtttgaagagacg
aagcgcaaagacgttgggaaccggatcacagagctgagcaaagtgattggccagctacat
gctgaaatgaaacagattcaaacgaacgtgtttgactactcggacaacaccaagggagat
ccgtcaggaggatcttctttcctggggaagtacatccttggagccaaaaacaacttcagg
ggcttcaacagcaacgagagaaagactgttccattacatgagcctttacaccatgaacaa
ccagcattggggactgtagaagagaaggaggaagagactgcagacatgcaggagtcaccg
gccgctgatacagagtcagacaggaaatcaaatgaagagcaaaacggcgagggagaaacg
gataatgctgtggaagacatgaatgagacagatgggggaggagatgaaggggacatggag
acggggaataatgatgtcactgatattagcatggaggctggtgctgaaaagaatacaagt
gagacagtcatagatatagaggccaatacagatgctgaaagtgaagctagagcaaaaaga
gaagatgagatgatggtggaggaggaaaccagtgataatgaggaggaattaaatgaagag
gccacaggaggaaaagatctagatgatgcagagacggagaaaaacatagaggttgaggaa
agtaatgaaatgacagaagatgtagttgaagtcatcaatgaaaatgcaggagagggcatc
aagataaacctgagtcagacgagcctagtgagtttcttagcaaagaggatagaggaaaag
ctagagaggaattttactttcattggaaaccaagtatcatcaccaactggcagtgatgac
tcccaagacaccggttttggttctcaagtatttgacctctcaactagcagtccttaa
DBGET
integrated database retrieval system
