Carassius gibelio (silver crucian carp): 127942059
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Entry
127942059 CDS
T08819
Name
(RefSeq) pseudouridylate synthase 1 homolog
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cgib03016
]
127942059
Enzymes [BR:
cgib01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
127942059
Transfer RNA biogenesis [BR:
cgib03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
127942059
Prokaryotic type
127942059
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
127942059
NCBI-ProteinID:
XP_052393560
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All DBs
Position
A21:complement(7524761..7527643)
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AA seq
419 aa
AA seq
DB search
MLRCCRIIQILKRHILIPALKNKGWPEDPILNSRGFYMSCKMTEESADTQIKALKRPADT
LAETEHEDKKLKTDQEERKYPKKKVALLMAYSGKGYYGMQRNAKNSQFRTIEDELVTALV
RAGCIPEGHGDDMKKMSFQRCARTDKGVSAAGQVVSLKVWMIDNILDKMNAHLPPHIRIL
GYKRVTGGFNSKNNCEARTYSYMLPTVSFSPKDYNQEDTSFRLSSETLQKVNRLFGLYKG
THNFHNFTSQKGPRDPSAKRYITHMSCGEPFVRQEAEFAIITVRGQSFMMHQIRKMIGLV
IAVVKGYVDEEVIEKSWGEDKVDVPKAPGLGLVLERVHFDRYNKRFGGDGIHETLEWTEE
EEAIAAFKDEHIYPSIVETELHEKSMVNWMATLYIHDFEATATGNQECKDDDEDGNVSD
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgctgaggtgctgtcggatcattcagattttaaaacgtcacatattaattccagctctt
aaaaataaagggtggccagaagatcctatattaaattcccgtggattttacatgtcctgc
aagatgactgaggagtcagcagacacccaaatcaaagctttgaagagaccagcagatact
ctcgctgagaccgagcatgaagacaagaagcttaaaacagaccaggaggagaggaaatac
cccaagaaaaaggtggccctgctgatggcatattcaggcaaaggctattatgggatgcag
agaaatgcaaagaactctcagttcaggaccattgaggatgaactggtcactgctcttgtg
agagccggatgtattccagagggccatggagatgacatgaagaagatgtctttccagcgg
tgtgcacggacggataagggtgtttctgctgcaggtcaagttgtgtctctgaaggtgtgg
atgattgacaacatcctggacaaaatgaatgcacatctgccacctcacataagaatttta
ggttacaaaagagtcacaggaggcttcaattccaaaaacaactgcgaagccagaacgtat
tcctacatgcttcccactgtgtctttctccccaaaggactataaccaggaggacacgtca
ttccgtctgagttcagagacccttcagaaggtcaaccgattatttggcctgtataaagga
acccacaacttccacaacttcacatcgcaaaaaggtccacgggaccccagtgccaaacgc
tacatcacccacatgtcctgcggagaaccgtttgtgagacaggaagctgagtttgccatc
atcacagtaagaggccagagcttcatgatgcaccagatccggaagatgatcggtctcgtg
atcgctgtggttaaaggatatgtagatgaagaggtgatcgagaagagctggggagaggac
aaagttgacgttcccaaggctcctgggttggggttggtgctggagagggtgcactttgac
cgctacaacaaacgcttcggaggagatggcatccatgagactctggaatggactgaggaa
gaagaagccatcgctgcttttaaggacgagcacatttatcccagcattgtagagactgag
ctccatgagaagtccatggtgaactggatggctacactctatatccatgattttgaagcc
acggccacaggaaaccaagagtgcaaagatgatgacgaagatggaaatgtatctgactga
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