Carassius gibelio (silver crucian carp): 127942109
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Entry
127942109 CDS
T08819
Name
(RefSeq) nucleoporin p54 isoform X1
KO
K14308
nuclear pore complex protein Nup54
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
127942109
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgib03019
]
127942109
Messenger RNA biogenesis [BR:
cgib03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
127942109
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nup54_C
LPP
XhlA
Motif
Other DBs
NCBI-GeneID:
127942109
NCBI-ProteinID:
XP_052393644
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Position
A21:complement(686060..697747)
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AA seq
521 aa
AA seq
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MAFNFGGASSNASLSGTGFGAATTTSASTSFGFGSGTTGAFGGFGSTTSAGAGTNFNFST
PSNTGASLFGNTQNKGFGFSSGLGSSAPAGTGFGGALGGTGLGFGGFAGIQPTQNQQGGL
FNQQASQSSQLFNTASALSAPSVLNDERDSILARWNQLQAFWGAGKGYFSSSTPPVEFSQ
ENPFCRFKAVGYSCVPDVKDEDGLVALALNKKEVDVRSQQQQLVESLHKVLGGNPTLSVN
VEGVRALPDDQTEMIVYLVERSPNGTSKRVPASTLYSYMEQLNVKSALQQLGVIMAVSRT
ALTPAQLKQLLQNPPAGVDPIIWEQAKVDNPDPEKLIPVPMVGFRELLRRLKIQDQMTKQ
HQTRVDIISNDISELQRNQATTAAKITQYKRKLMDLSHRVLQVLIKQEVQRKSGYAIQLD
EEHLRVQLETIQSELNAPTQFKGRLNELMSQIRMQNHFGAVRSEERYRVDADLLREIKQH
LKQQQQGLSHLISVIKDDLDDIKTVEDGLHDGVHGRSSKLS
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcaacttcggcggcgcgtccagcaacgcgagtctttctggcacgggcttcgga
gccgcgaccacaacatccgcgtccacgagcttcggcttcggatcgggcaccacgggtgcg
ttcggggggttcggctccaccacctccgctggcgccggcaccaacttcaatttctccaca
ccgtcaaacacaggtgctagtctctttggaaacactcagaacaagggcttcggcttctcg
tccggtctgggctccagtgcaccggcggggacgggcttcggaggagctctgggcggcact
ggactgggcttcggaggattcgctgggatccagcccactcagaaccagcaaggaggcctg
tttaaccagcaggcgtctcagtccagtcagctgtttaacacggccagtgctctctccgct
ccgtcggtgctcaatgacgagcgcgactctattctggctcggtggaaccagctgcaggcg
ttctggggcgcagggaaggggtacttcagcagcagcacaccccccgtggagttcagccag
gagaaccccttctgccgcttcaaagcggtgggctacagctgtgttcctgatgtgaaggat
gaggatggtttagtggctctggctctcaataagaaggaagttgatgttcgctctcagcag
cagcagctggtcgaatcattgcacaaggttctgggaggaaaccccactctttctgtgaac
gtggagggagtgcgagcgctgcccgatgaccagacagagatgatcgtttatctggtggag
cgctctcctaacggcacgtcgaagcgagtcccggcgtccacgctctacagctacatggag
cagctgaacgtgaagtctgcgctgcagcagctgggggtcatcatggcggtcagtcgcacc
gcactgaccccagcacagctcaagcagctgctgcagaacccccccgcaggtgtggatccc
atcatctgggaacaggccaaagtggacaatccagacccagagaagttgattccggtgccc
atggtgggcttcagagagctgctgcgcagactgaagatccaggaccagatgaccaaacag
caccagaccagagtggacatcatctctaatgacatcagtgaactgcagaggaatcaggcc
acgaccgccgccaagatcacgcagtacaaacgcaagctgatggacctctcacacagagtc
ctgcaggtgttgattaaacaggaagttcagaggaagagcggttacgccattcagctggac
gaggaacacctgagggttcagctggaaaccatccaatcagagctcaatgcaccgacacag
ttcaaggggagactgaatgaactcatgtctcagattcggatgcagaatcattttggagcc
gttcgttcagaagagcgttaccgtgttgatgcagatctgctgagagaaatcaaacagcat
ctgaagcagcagcagcagggtttgagtcacctgatcagtgtcattaaagacgatctggac
gacatcaagactgttgaagacgggcttcacgacggcgttcacggacgcagcagtaaactc
agctga
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integrated database retrieval system