KEGG   Carassius gibelio (silver crucian carp): 127942109
Entry
127942109         CDS       T08819                                 
Name
(RefSeq) nucleoporin p54 isoform X1
  KO
K14308  nuclear pore complex protein Nup54
Organism
cgib  Carassius gibelio (silver crucian carp)
Pathway
cgib03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:cgib00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    127942109
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cgib03019]
    127942109
Messenger RNA biogenesis [BR:cgib03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     127942109
SSDB
Motif
Pfam: Nup54 Nup54_C LPP XhlA
Other DBs
NCBI-GeneID: 127942109
NCBI-ProteinID: XP_052393644
LinkDB
Position
A21:complement(686060..697747)
AA seq 521 aa
MAFNFGGASSNASLSGTGFGAATTTSASTSFGFGSGTTGAFGGFGSTTSAGAGTNFNFST
PSNTGASLFGNTQNKGFGFSSGLGSSAPAGTGFGGALGGTGLGFGGFAGIQPTQNQQGGL
FNQQASQSSQLFNTASALSAPSVLNDERDSILARWNQLQAFWGAGKGYFSSSTPPVEFSQ
ENPFCRFKAVGYSCVPDVKDEDGLVALALNKKEVDVRSQQQQLVESLHKVLGGNPTLSVN
VEGVRALPDDQTEMIVYLVERSPNGTSKRVPASTLYSYMEQLNVKSALQQLGVIMAVSRT
ALTPAQLKQLLQNPPAGVDPIIWEQAKVDNPDPEKLIPVPMVGFRELLRRLKIQDQMTKQ
HQTRVDIISNDISELQRNQATTAAKITQYKRKLMDLSHRVLQVLIKQEVQRKSGYAIQLD
EEHLRVQLETIQSELNAPTQFKGRLNELMSQIRMQNHFGAVRSEERYRVDADLLREIKQH
LKQQQQGLSHLISVIKDDLDDIKTVEDGLHDGVHGRSSKLS
NT seq 1566 nt   +upstreamnt  +downstreamnt
atggcgttcaacttcggcggcgcgtccagcaacgcgagtctttctggcacgggcttcgga
gccgcgaccacaacatccgcgtccacgagcttcggcttcggatcgggcaccacgggtgcg
ttcggggggttcggctccaccacctccgctggcgccggcaccaacttcaatttctccaca
ccgtcaaacacaggtgctagtctctttggaaacactcagaacaagggcttcggcttctcg
tccggtctgggctccagtgcaccggcggggacgggcttcggaggagctctgggcggcact
ggactgggcttcggaggattcgctgggatccagcccactcagaaccagcaaggaggcctg
tttaaccagcaggcgtctcagtccagtcagctgtttaacacggccagtgctctctccgct
ccgtcggtgctcaatgacgagcgcgactctattctggctcggtggaaccagctgcaggcg
ttctggggcgcagggaaggggtacttcagcagcagcacaccccccgtggagttcagccag
gagaaccccttctgccgcttcaaagcggtgggctacagctgtgttcctgatgtgaaggat
gaggatggtttagtggctctggctctcaataagaaggaagttgatgttcgctctcagcag
cagcagctggtcgaatcattgcacaaggttctgggaggaaaccccactctttctgtgaac
gtggagggagtgcgagcgctgcccgatgaccagacagagatgatcgtttatctggtggag
cgctctcctaacggcacgtcgaagcgagtcccggcgtccacgctctacagctacatggag
cagctgaacgtgaagtctgcgctgcagcagctgggggtcatcatggcggtcagtcgcacc
gcactgaccccagcacagctcaagcagctgctgcagaacccccccgcaggtgtggatccc
atcatctgggaacaggccaaagtggacaatccagacccagagaagttgattccggtgccc
atggtgggcttcagagagctgctgcgcagactgaagatccaggaccagatgaccaaacag
caccagaccagagtggacatcatctctaatgacatcagtgaactgcagaggaatcaggcc
acgaccgccgccaagatcacgcagtacaaacgcaagctgatggacctctcacacagagtc
ctgcaggtgttgattaaacaggaagttcagaggaagagcggttacgccattcagctggac
gaggaacacctgagggttcagctggaaaccatccaatcagagctcaatgcaccgacacag
ttcaaggggagactgaatgaactcatgtctcagattcggatgcagaatcattttggagcc
gttcgttcagaagagcgttaccgtgttgatgcagatctgctgagagaaatcaaacagcat
ctgaagcagcagcagcagggtttgagtcacctgatcagtgtcattaaagacgatctggac
gacatcaagactgttgaagacgggcttcacgacggcgttcacggacgcagcagtaaactc
agctga

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