Carassius gibelio (silver crucian carp): 127942121
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Entry
127942121 CDS
T08819
Name
(RefSeq) glucocorticoid receptor-like isoform X1
KO
K05771
glucocorticoid receptor
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
127942121
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgib03000
]
127942121
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cgib03310
]
127942121
Transcription factors [BR:
cgib03000
]
Eukaryotic type
Zinc finger
Cys4 estrogen receptor-like
127942121
Nuclear receptors [BR:
cgib03310
]
3. Estrogen like
3C. 3-Ketosteroid receptor
127942121
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Paralog
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Motif
Pfam:
Hormone_recep
GCR
zf-C4
Motif
Other DBs
NCBI-GeneID:
127942121
NCBI-ProteinID:
XP_052393663
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Position
A21:18916293..18972055
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AA seq
738 aa
AA seq
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MDSGQKRSSNSPENLTFGDCIERGFVPDIDIDIGVSASALNTSKEFSNGQSGSDAQRNLS
LADPSLMGRNIQEPDVKGFRPFKMQHQQKVKEPLNIGENFSLLDESIADLNRGSGIQAPD
TFAMKMEQFSPMEKDGLDFPSYDHRNKELDVNERVIGDNTIDILKDLDFTDSLSELNELY
VADEAAFLSSLAVDETLLGEGNFLKETSPVVTGSSAACANVNGTGKRQQMVEASVNIKTE
KDTDFIQLCTPGVIKQESERRSYCQMSGMGGLHGGPAALGDMGGQGYHYGGNTASAVTLP
DQKPPFGLFSPLHTLSDGWGRGNGYGDPSGMQRANETVLPSTYPYSSSMARPEASSSSSS
GSVKPGGNTHKICLVCSDEASGCHYGVLTCGSCKVFFKRAVEGWRARQNADGQHNYLCAG
RNDCIIDKIRRKNCPACRFRKCLQAGMNLEARKNKKLMRLRGHSSSSEQAPALPEERMCS
LVPKAMPQLVPTMLSLLKAIEPEIIYAGYDSTIPDTSTRIMTTLNRLGGRQVISAVKWAK
ALPGFRNLHLDDQMTLLQCSWLFLMSFGLGWRSYQQCNGGMLCFAPDLVINEERMKLPYM
NEQCSQMLKITSELVRLQVSYDEYLCMKVLLLLSTVPKDGLKSQAVFDEIRMSYIKELGK
AIVKREENSSQNWQRFYQLTKLLDSMQEMVEGLLSFCFYTFVNKSLSVEFPEMLAEIISH
QLPKFKDGSVKPLLFHQK
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atggacagtggacaaaaacgcagcagtaacagtcctgagaatttaactttcggggattgt
atcgagagaggcttcgtgcccgatattgacattgatattggtgtcagtgcgtccgcttta
aatacgtcaaaagagttctccaacggacagagcggtagtgacgctcaaagaaatctctct
ctggcagatccgtctttaatgggacgtaacatacaagaaccagatgttaagggattcaga
cctttcaaaatgcagcaccagcaaaaggtaaaagagcctcttaacattggggagaacttt
tcgctcttggacgagagcattgcggacttaaatcgtggttctggcatccaggcccctgac
acttttgcaatgaaaatggagcagttttcccccatggagaaagatgggctggactttcca
tcctatgaccaccggaataaggaattggatgttaatgagagagtgattggagacaacacc
attgacatccttaaggatctggacttcactgactccctatctgagctgaatgagctctac
gttgccgacgaggctgcctttctttcctcattggcagtggatgaaaccctgctgggagag
ggcaactttctgaaggagaccagccctgttgtcactggcagcagtgcagcctgcgcgaat
gtgaacggcacggggaaacggcagcagatggtggaagccagtgtcaacataaagacagag
aaagacacagactttatccagctgtgcacaccaggtgtcatcaaacaggagagtgagagg
cggagctactgtcagatgtcagggatgggtgggcttcacggtgggcccgccgctttggga
gatatgggcggacagggataccactatggaggcaacactgcctcagcggtgactttacca
gatcagaaaccccctttcggcctgttttctcccctacacaccttaagtgatggctggggt
cgaggaaatggatatggagatccgtctgggatgcagagagccaatgagacggtacttccg
tccacctatccatacagcagctctatggccaggcctgaagcgagcagctccagttcgtct
ggatcagtcaagcccggcggaaacacccataagatctgcctggtgtgctctgatgaggcc
tccgggtgtcattatggggtgctcacctgtggcagctgcaaggttttcttcaaaagagcc
gtagagggatggagagcgcggcaaaacgcagatgggcagcacaactatctctgcgctgga
aggaatgattgcatcatcgacaagataagaaggaaaaactgcccggcgtgccgctttcgc
aagtgtcttcaggccggcatgaacctggaagctcgaaaaaacaagaaactgatgcgatta
cggggtcattcgtcctcaagcgagcaggccccagctctgcctgaagagcgcatgtgttca
ctggtgcccaaagccatgccccagctggtgcccaccatgctgtccctgctcaaagccatt
gagcctgagatcatttacgcaggttacgacagcaccatcccggacacctccacccgcatc
atgaccacacttaaccgtctgggaggccggcaggtcatctctgcagtcaagtgggccaaa
gcccttcccggcttcagaaacctgcacctggatgaccagatgacgctcctgcagtgctcc
tggctcttcctcatgtccttcggcttgggctggagatcctaccagcagtgtaacggaggc
atgctgtgtttcgctccggacctcgtcatcaatgaggagaggatgaaactaccctacatg
aatgagcagtgtagccagatgctgaagatcaccagtgagctggtcaggcttcaggtgtcc
tacgatgagtacctctgcatgaaagtgctcctcctcctcagcacagtaccaaaggacggc
ctgaaaagccaagctgtgtttgatgaaatccgcatgtcgtacatcaaggagctgggcaaa
gccattgttaaacgtgaggagaactccagccagaactggcagaggttctaccagctcacc
aagctattggactcgatgcaggagatggtggaggggctcctcagcttctgtttctacacg
tttgtgaataaatctctgagcgtggagtttcccgagatgttggcggagatcatcagccat
cagctaccaaaatttaaagacgggagtgtcaagcctcttctgttccatcagaaatga
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