Carassius gibelio (silver crucian carp): 127942126
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Entry
127942126 CDS
T08819
Name
(RefSeq) homeobox protein orthopedia B-like isoform X1
KO
K24901
homeobox protein orthopedia
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgib03000
]
127942126
Transcription factors [BR:
cgib03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
127942126
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
OAR
Homeobox_KN
Auxin_canalis
Motif
Other DBs
NCBI-GeneID:
127942126
NCBI-ProteinID:
XP_052393671
LinkDB
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Position
A21:4532382..4537322
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AA seq
328 aa
AA seq
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MLSHADLLDARLGELSTPNSGLQLYWMKDAAAELLGHREALKCRLGGGGTDPGHPGELAP
VSDAVEGATLLPGDDINSAGSNPPGVAVNSKEQEKQQQQNPTQSGGQQSQSQKQKRHRTR
FTPAQLNELERSFAKTHYPDIFMREELALRIGLTESRVQVWFQNRRAKWKKRKKTTNVFR
APGTLLPTHHGLPQFPSAAAMGDGLCSFHANDTRWAAAGMPGVSQLQLPPALGRQQAMAQ
SLSQCSLGAGPPPNSMSLSNMSSNGSGLQSHLYQPTFPGMVPASLSGPTNVTGSPQLCSS
PDTDIWRGTSIASLRRKALEHTVSMSFT
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgctttcgcacgccgacctgctggatgctcgcctcggtgagttgtcaacgccaaactcc
ggtctgcaactctactggatgaaggatgccgcggctgagcttctgggtcacagggaggca
ttgaaatgcaggctgggcggcggcggaactgacccgggccaccccggagaactcgccccg
gtctccgatgcagtggaaggggccacccttctccccggagacgatatcaacagtgctgga
tccaatccgccgggtgtagcggtaaacagtaaggaacaggagaagcagcagcagcagaac
cccacccagtccggcggccagcagagtcagagtcagaaacagaaacggcaccggactcgc
tttactccggctcagcttaacgagctggaacgcagcttcgccaaaacccactatccggac
atcttcatgcgcgaggagctcgcgctccggatcggcctgacggaatcacgcgtgcaggtt
tggtttcagaaccgacgcgccaaatggaagaagcgcaagaagaccaccaacgtgtttcgc
gctccgggcactttgctgcccactcaccacggcctcccgcagttcccctccgcggcggcc
atgggcgacggcctgtgctcttttcacgctaatgacacccgctgggccgcggctgggatg
ccgggagtctcacaactgcagttaccgcccgccctaggccgacaacaagctatggcacag
tctctgtcccagtgcagcctgggcgccggtcctccacccaactccatgagcctgtccaac
atgtcctccaatggttccggcctccagtcccacctctaccagcccaccttccccggtatg
gtgcccgcgtcgctctctggtcccaccaacgtgaccggctcgcctcagctgtgtagctcc
ccggacactgacatctggagagggacgagcatcgcgtccctgcgccgcaaagcgctcgag
cacacagtgtccatgagtttcacctaa
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