Carassius gibelio (silver crucian carp): 127942194
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Entry
127942194 CDS
T08819
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1-like isoform X1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04020
Calcium signaling pathway
cgib04080
Neuroactive ligand-receptor interaction
cgib04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
127942194
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
127942194
04082 Neuroactive ligand signaling
127942194
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cgib04040
]
127942194
Ion channels [BR:
cgib04040
]
Ligand-gated channels
Glutamate (ionotropic)
127942194
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GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
Peripla_BP_6
Motif
Other DBs
NCBI-GeneID:
127942194
NCBI-ProteinID:
XP_052393805
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Position
A21:6060710..6086857
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AA seq
951 aa
AA seq
DB search
MRLLLLAALFSCSCVLCGCEPKIVNIGAVLSQKRYEQVFKDAVAQANQVYGRDKFKLTAI
SVTHKANAIQMALSVCEDLISSQVYAILVSHPPQSSDHLTPTPVSYTAGFYRIPVVGLTT
RMSIYSDKSIHLSFLRTVPPYSHQAHVWFDMMREFRWNHIILIVSDDHEGRAAQKRLETL
LEEKETKNKKRNYENQDQLSYDNKRGPKAEKVLQFNQETNLTALLLEAKELEARVVILSA
SEEDAAAVYKTARFLNMTGSGYVWLVGEREMSGKALSEAPDGLIGLQLINGKNESAHISD
AVAVVAQSIQELFEKENITEPPRGCVGNTNIWKTGPLFKRVLMSSKYPEGLTGRVEFNDD
GDRKYAHYSILNYQKSRLIQVGIYNGTQVVMNKQKKIIWPGGETERPRGFQMSTRLKIVT
IHQEPFLYVKPTTLDGTCKEEYTPNGVLIKKVICTGPNETIPGNTSGRATVPQCCYGFCV
DLLIKLAMTMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLGGLADMIVAPLTIN
NERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLL
DRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFA
MIIVASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELS
TMYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFGI
GMRKDSPWKQNVSLAILSSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFMLV
AGGIAAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQPSSSVETQDDRKSGRAD
SDPKKKPSFRSISTTLASSIKRRRSSKDTQFPPTDITGQLNLSDPSVSTVV
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctgcttctgctggccgcgttattctcttgctcctgcgtgctgtgcggctgcgag
cccaagattgtgaacatcggagccgtcctgagccagaagagatacgagcaggtgttcaag
gatgcggtcgctcaggcgaaccaggtgtacggaagggataaattcaagttgaccgccatc
tctgtcactcacaaagccaatgcgattcagatggcgctgtctgtgtgtgaggatctcatt
tccagtcaggtctatgccatcctggtgagccatccaccacagtccagtgaccatctgacg
cctactccggtctcctacaccgcaggcttctaccgcatacctgtagtagggctcaccacc
aggatgtccatttactcagacaagagcatccatctctcattcctccgcacggtgccaccc
tattcccaccaggcacatgtgtggtttgacatgatgcgggagttccgctggaatcacatc
attctaatcgtcagtgatgaccatgaaggcagagcggcacagaaaagactagaaactctt
ctggaggagaaagagaccaagaataaaaaaaggaactatgaaaaccaagaccaactgtcc
tatgacaacaagagaggacctaaggccgagaaagtgcttcaattcaaccaagagactaac
ttaactgccctgctcctggaggccaaagagttggaagcccgagtggtcattctctctgcc
agcgaagaagatgcagcagccgtgtacaaaacagcacgcttcctcaacatgacaggctca
ggctatgtatggctggttggggagcgtgagatgtccggtaaagctttgagcgaggcccct
gatgggctgattggcctccagctaatcaacggcaagaatgaatcagcgcacatcagtgat
gctgttgctgttgtggcccagtccatccaagagctctttgagaaagagaacatcacagaa
cctccaaggggctgtgtgggcaataccaacatctggaagaccgggccactctttaaaagg
gtattgatgtcttccaagtacccagagggcctaacaggacgcgttgagttcaatgacgac
ggtgacagaaaatacgctcattacagcattctcaactaccagaagagccgactgattcaa
gtcggaatttacaatggaacacaagtggtgatgaataaacagaagaagataatttggcct
ggaggtgaaaccgaaagaccgagaggattccagatgtctactcgattaaagatagtgacc
attcatcaggaacccttcttgtatgtgaagccaactacattggatgggacctgcaaggaa
gagtacacacctaatggagtcttaattaaaaaggtgatctgcactggaccaaatgagacc
atcccaggtaacacatcaggacgtgcaactgttccccagtgttgctacggattttgcgtt
gaccttctgatcaaattggcaatgactatgaacttcacctatgaagtacacctggtggca
gatgggaaatttggaacacaagaaagagtaaataacagtaacaaaaaggaatggaacggc
atgatgggtgagctcctgggtggccttgctgatatgatcgttgcacccttgacgatcaac
aatgaacgagcccagtatatagaattctccaagcctttcaaataccagggactaactatc
cttgtgaaaaaggaaattcctcgcagtacactggactcattcatgcagccattccaaagc
acactgtggctattggtgggtttgtcggtacatgtggtggcggtgatgctttacctacta
gaccggttcagcccatttggaaggtttaaagtaaacagtgaagaagaagaagaggatgcc
ctcaccttatcttcagctatgtggttttcctggggcgtcttgttgaactctggaattgga
gaaggtgccccacgtagtttttcagcaagaattttgggaatggtgtgggctggctttgct
atgattatagtagcatcctatactgccaacctggctgccttcctggtgttggaccggcct
gaggagcgcatcaccggcatcaatgacccaaggctaaggaacccatcagacaagttcatc
tatgccacagtgaagcaaagttcagtggatatttacttccggcgacaagttgagctgagc
accatgtaccgccacatggagaagcacaactacgaaagcgccgctgaagccatccaggct
gttcgggacaacaagctgcatgctttcatctgggactctgcggtgctggagtttgaagcc
tcgcagaagtgcgacctggttaccacgggagagctgtttttccgttcgggctttggcata
ggcatgcgcaaggacagcccctggaaacagaatgtgtccctggctattctcagttcccat
gagaatggcttcatggaagacctagataaaacctgggtgagataccaggagtgtgactca
cggagcaatgccccagccacactcacctttgagaatatggcaggtgtcttcatgctagtt
gctggaggcattgcagcaggaatcttcctcatcttcattgagattgcatataagcgccat
aaagacgcccgcaggaagcagatgcagctagcctttgcggccgtcaacgtttggaggaag
aacctacagccctcttcctctgtagagactcaggatgataggaaaagtggtagagcagac
agcgacccaaaaaagaaaccctcttttaggtccatcagtaccaccctggcctccagcatc
aagagacgtaggtcctccaaagacacgcaattcccacccacagacattacgggccaactc
aacttgtccgacccgtctgtcagcacggtggtgtga
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