Carassius gibelio (silver crucian carp): 127942222 Help Entry 127942222         CDS       T08819                                  Name (RefSeq) nucleoporin NUP188   KO K14311   nuclear pore complex protein Nup188 Organism cgib  Carassius gibelio (silver crucian carp) Pathway cgib03013   Nucleocytoplasmic transport Brite KEGG Orthology (KO) [BR:cgib00001]  09120 Genetic Information Processing   09122 Translation    03013 Nucleocytoplasmic transport     127942222  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:cgib03019]     127942222 Messenger RNA biogenesis [BR:cgib03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Nuclear pore complex      127942222 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Nup188_N-subdom_III Nup188_N Nup188_SH3-like Motif Other DBs NCBI-GeneID:  127942222 NCBI-ProteinID:  XP_052393853 LinkDB All DBs Position A21:3178160..3197941 Genome browser AA seq 1732 aa AA seqDB search MADSAMCVRSSRELWTILLGRSALREPAQIEAELDRNWERLLQGLFFYKPPSTSAADKLK ADKDTPQALKDFGLRISKHLGLDEQQSVQILQCYLQEDYRATRNTLKAVLQDERQSQALL LKIADYYYEERLCVLRCVLHLLTYFQDERHPYSAEYSNCVSKLEKDLVSIYRQQFESLSK SEAPTWETHGNLMTERQVSHWFEQCLKEQALLLEILFLYYAYFEMPPNDLSTFTRLFKEQ GFGQRQTNRHLVDKSMDVLVERIGYFSSLILVEGMDIDFLHKCALEDRTEQHQFYDQQDI CKEVDQMLLTLGDISHHGPVLLAWVLLRHTLRPEEVSSVIRRLGHTTLQLGVFQYLTNML QALGSTGNNCTASTARMCIYGLMSFVITSFEEDTLGSQQHLINAACEVLAAPSLAELFWE SKPNMGLGVILDSAVGVFPYKTGPLLQLLTALLSDKSTAKKVYTFLDKMSFYTEAYKHKP NDVISREDGTLWRRQTPKLLYPLGAGQTNLRMPQGCFGLVCEGKQQSVGEQGFLVRWEYS YSSWTLFTCEIEMLLHVVSTADVLAHCERVKPILDLVHKIISTDWTVSDCLLPLTSRIYM LLQRLTSVINPPVDVITSCVNCLIALAARQPGKVWSSLHHTGFLPFAATPLTNMAQTISA EGMKAGNYGNLLVLIEQPRGEYSVTIAFLRLVTTLVKGQLGSTQSRGLIPCVLLVLKEML PTYHKWRYNTYGVRERIGCLILELIHAILNLNQEGESEGSAPNLQSLCIYSLANTEAGQA VVNIMGVGVDTINMVLAAQPSSGGSEGPGQVLIQTVKLAFSVTNNVIRLKPQSDTASPLE QALTQHGGHSNNLIAVLAKYIYHKHDPALPRLAIQLLKRLATVAPMSVYACLGSDAAAIR DAFLTRLQSRTEDMRIKVTILEFLTVAVETQPGLIELFLNLETKDGSEGAKEFSLGEWSC LSVVLELLDSKQQGKYWCPPLLHRAALAFLHALWQDRRDSALSVLRTKEKFWENLTTPLF GNLPPPSETTESCVLESCAFVMKIIALEIYYVVSGVLDPSLKAALESFSSKRRYEFWSDY VRDLVCVACDGEEEGLRSLSESQMLISAWRTLLILSTSHSDVMHLKDDSVRQKLFMDVLE GTKAALLMSQSVFCLRLGSMMVTLLLILLKQWKSVFVSAPALLPPLSLMMESVLHAEQQL TDRTKAKLLSALILALQNQGLNGGEITQLPQLLLCVCEMVQDEALGLIDSTRHMIQRGDV QEDSMETDSPHFQKDQQDSVCVLALHLSKELCRADEDGEQWLQVVRKLPVLPSVLSALEL SLRSKQNLYFTEAALHLLLTLARTPQGAAAVAGAGVIQSICLPLLSVYEGPSNGATQPFV RKSQDAPSWPGVYRLSLSLMESLLKTVRYNFINEALDFVGVHQERILQCLNAVRTVQSLA CLDEADHTVGFLLQLSNFCKEWQFHLPQLLRDVQVNLCYLCQTCTYLLHSKKMLHHYLQA KNGEGLPPGPHPQHVIQPASKEQVEGEREEAESKALQAVQCSLLKILSKTLATLQHFTPD CCQILLDQSMDLAEYRTLFVLSFTTPAFDSDVAPSFGTLMATINVALSMLGEIEKRKEPV VVSEDTQALKSLLMFSMENCFYVLISQAVRCLKDPSVLPRDKQRLKQELSSELSTLLSTL FRFFRRGSPSSPASGLLPSLQTKPPTPGSKATPEGQEPFIQLVQAFVRHVQR NT seq 5199 nt NT seq  +upstreamnt  +downstreamnt atggcggactcggcgatgtgtgtcaggagcagccgagagttatggactatcttgctggga agatctgcacttcgagaaccggcccaaattgaggctgaattggatcgaaactgggagaga cttctgcagggtctgttcttctataaaccacccagcacatcggccgcagacaagctgaaa gcagataaagacacaccacaagctctaaaagatttcggactcaggatcagcaaacatctg ggtttggatgaacagcaaagcgtgcagattcttcagtgttacctccaggaggactacagg gccacacgaaacacactcaaggctgtgctgcaggatgagagacagagtcaagctctgctt ctgaagattgcagattactactatgaagagagactgtgcgttctacgctgtgttcttcac ctcctcacgtacttccaggatgagagacatccatacagtgcagagtactccaactgtgta agtaaactggagaaagatctggtgtccatctacaggcagcagtttgagtcgctgtccaaa tcagaagctccaacatgggagacgcatggaaacctgatgacggagaggcaggtgtcccac tggtttgagcagtgtttgaaggaacaggccctgcttctggagatcttgttcctgtactat gcatactttgagatgccgcccaatgacctttccaccttcacacggctgtttaaagagcag ggctttggacagcggcagaccaatcgacaccttgtggacaagagcatggatgtgctggtt gagcgcattggctatttcagttctttaattcttgtggaggggatggatatcgactttctg cataaatgtgcactggaagaccgaactgaacagcatcagttttatgaccaacaggatatt tgcaaggaggtggatcagatgcttttgacgcttggtgacatttctcaccacgggccagtt ctcttggcctgggttcttctgcgacacacactgcgtccggaggaagtgagctctgtgatc agacgtctaggacacacgacgctgcagctcggagtctttcagtatctcaccaacatgctg caggcactcggcagcactggaaataattgtacagcgagcactgcgcggatgtgtatttat ggtctcatgtcttttgtcatcacctcttttgaagaagacacactcggcagccaacagcat ctgatcaatgcagcatgtgaagttcttgctgctccgagtctggctgagcttttctgggag tcgaagccaaacatgggtctcggtgtgattctggacagtgcagtgggtgtgtttccatac aagactggacctttactacagctgctcaccgctctgctgtctgacaaatctacagctaag aaggtgtataccttcttagataagatgtcattctacactgaggcctataagcacaaaccc aacgacgtgatctccagagaggatggcactctttggaggagacagactcctaaactcctc taccctctgggtgcaggtcagaccaacctgcgaatgccacagggatgttttggactggtg tgtgaaggaaagcagcagtctgtgggtgaacagggtttcctggtgcgctgggagtattcc tacagctcatggactctcttcacctgtgagatcgagatgctgctgcacgtcgtctctact gcagatgtgttggcacactgtgagcgagtgaagcccatcttggatctggttcataagatc atcagcactgattggacagtttctgactgtttgctgccactcacgtcacggatctacatg ctgctacagaggttgacctccgttattaaccctccagtagatgtgatcacttcctgcgtc aactgccttatcgctctagctgctcggcagcctgggaaggtttggtccagtctgcatcac accggcttccttccatttgcggccacccctctgactaacatggcacagaccatcagtgca gagggcatgaaggcaggtaattatgggaacctgttggtgttgattgaacagcccagagga gagtacagtgtgaccattgcctttttaagactagtgaccacactcgtcaagggtcagttg ggcagtactcagagcagaggactcatcccgtgtgtgctgctggttctgaaagaaatgctg ccgacgtatcataaatggcgctacaatacctatggagtgcgggagaggatcggttgtttg attctagagctgattcatgctattctcaatttgaaccaggagggggagtcagagggcagc gcccccaatctgcagtcgttgtgtatctacagtctggccaacacagaggcaggacaggcg gtggtcaacatcatgggtgtaggagtggacactatcaacatggtgctcgcagcacagcct agcagtggtggttctgagggacctggtcaggttttgatccagaccgtaaagctggcgttc tcggtcaccaacaacgtgatccgactcaaaccgcagtctgatacagcctcgcctctggag caagcgctaacacagcacggtggtcacagcaacaacctgattgctgtgctggcgaagtat atttaccacaagcacgatccagcgctgccacggcttgccatacagctgctgaagagactt gccacggtggctcccatgtcggtgtatgcttgcctgggcagtgatgccgctgcgatcaga gatgcgtttctgacacgactgcagagcagaacagaagacatgcgtattaaagtcaccata ctcgagttcctcaccgtggctgtggaaacacaacctggactcattgagctcttcctcaac ctggagaccaaagacggcagcgagggtgcaaaggagttttctctgggagagtggagctgt ttgtcagtggtgttggagttgttggactctaagcagcaggggaagtactggtgtcctcca ctcctgcacagggcagcactggccttcctccacgcgctctggcaggacagacgggacagc gctctctcggtgctcaggaccaaagaaaaattctgggagaacctcacaactcctttgttt ggaaatttacctcccccatctgagacaaccgagtcgtgtgttctggagtcttgtgccttt gtgatgaagataatcgctcttgagatctactatgttgtcagtggtgtgttggatccgtct ctgaaagcggctctggagagtttcagcagtaagcgccgctatgagttctggtcggattac gtgcgtgatctggtgtgtgtggcgtgtgatggtgaagaggagggtctgcgctctctgtcc gagtctcagatgctcatctccgcctggaggacgctcttaatactctccaccagtcattct gatgtgatgcatctgaaggatgacagtgtcaggcagaagcttttcatggacgtgttagaa gggaccaaagcagcgctgctgatgtctcagtcggtcttctgtctgcgtttggggtccatg atggtcacgctgctcctcatcctcctcaaacagtggaaaagtgtgtttgtgtccgctcca gctcttctgccgcccctgtctctgatgatggaaagcgttctgcatgctgaacaacagctc acggaccgaaccaaagccaaactcctgtcagctctcatcttagctctgcagaatcaagga ctcaacggaggagagattacccagcttccccagctgctgttgtgtgtgtgtgagatggtt caggacgaagccctggggttgattgacagcacacgtcacatgatacagagaggtgatgtt caggaggacagcatggagacagacagcccacatttccagaaagaccaacaagactcagtg tgtgtgttagctcttcatctctctaaagagttgtgtcgggctgatgaggatggtgagcag tggctgcaggtggtcaggaagctgccagttctgccgtcggttctcagtgctctggagctc agcctgcgttccaaacagaacctttacttcacagaggcagcgcttcatctgctgctcact ctcgccagaacaccgcagggggcagcagcggtggcaggtgccggagtgattcagagcatc tgtcttcctctcctcagtgtgtatgagggaccttctaatggagccacgcagccgtttgtg cgtaagtctcaggacgcccccagctggccgggtgtgtacagattgagtctgtctctgatg gagagtctgctgaaaactgtccgttacaacttcattaatgaagcgctggactttgtgggc gtccaccaggagcgcatcctgcagtgtctgaatgcggtgaggacggttcagtctctggcg tgtctggatgaggccgatcacacggtgggcttcctgctccagctctccaacttctgcaag gaatggcagttccacctgccacagctgctcagagacgtacaggtgaatctgtgctatctg tgtcagacgtgtacatacctcctacacagcaagaaaatgctgcaccattacctgcaggcc aagaatggggaggggcttccaccggggccacacccccaacatgtcatacagcccgcctct aaagagcaggtggagggcgagagagaggaggcggagtctaaagcgctgcaggcggttcag tgcagcctgttaaagatcctcagcaaaactctggccacgttacagcatttcacacccgac tgctgtcagatactgctggaccagtctatggaccttgcggagtacaggacgctgtttgtg ttgagtttcaccactcctgcttttgactctgatgtggctccgtcgtttgggactctcatg gccaccattaatgtggcgctgagcatgctgggagagattgagaagaggaaggagccggtg gtggtctctgaggacactcaggcactgaagtctttgctgatgttctcgatggagaactgc ttctatgtgttgatctcgcaggctgttcgctgtctgaaggatccttcagttttgcccaga gacaaacagagacttaaacaggagctcagctcagagctgagtacattgttgtcgacatta ttccgttttttccggcgaggttccccttcctccccagccagcgggctgcttccctcactg caaaccaaaccacccacaccaggatccaaggccacgccggagggccaggagcccttcatc cagctggtccaagccttcgtccggcacgttcagcgctag

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