Carassius gibelio (silver crucian carp): 127942333
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Entry
127942333 CDS
T08819
Name
(RefSeq) replication factor C subunit 2-like
KO
K10755
replication factor C subunit 2/4
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03030
DNA replication
cgib03410
Base excision repair
cgib03420
Nucleotide excision repair
cgib03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
127942333
03410 Base excision repair
127942333
03420 Nucleotide excision repair
127942333
03430 Mismatch repair
127942333
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cgib03032
]
127942333
03036 Chromosome and associated proteins [BR:
cgib03036
]
127942333
03400 DNA repair and recombination proteins [BR:
cgib03400
]
127942333
DNA replication proteins [BR:
cgib03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
127942333
DNA Replication Termination Factors
ELG1-RFC complex
127942333
Chromosome and associated proteins [BR:
cgib03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
127942333
DNA repair and recombination proteins [BR:
cgib03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
127942333
Check point factors
HRAD17(Rad24)-RFC complex
127942333
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_22
AAA_14
AAA_16
RCF1-5-like_lid
Mg_chelatase
Viral_helicase1
AAA_24
AAA_11
Rad17
RuvB_N
AAA_assoc_2
AAA_19
nSTAND3
DNAX_ATPase_lid
MipZ
AAA_18
ABC_tran
AAA_5
AAA_28
AAA_23
AAA_30
AAA_25
MeaB
SLFN-g3_helicase
NTPase_1
MCM
RNA_helicase
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
127942333
NCBI-ProteinID:
XP_052393960
LinkDB
All DBs
Position
A21:complement(12904469..12907417)
Genome browser
AA seq
353 aa
AA seq
DB search
MDVEMKEADIEQSQADGPPKKDDTAPKSSTNAYELPWVEKYRPLKLNEIVGNEETVSRLE
VFAREGNVPNIIIAGPPGTGKTTSILCLARALLGPAMKDAVLELNASNDRGIDVVRNKIK
MFAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPI
QSRCAVLRYSKLRDDQIMMRLTEVVEQENLHVTNDGLEAIIFTAQGDMRQALNNLQSTNS
GFGYINSENVFKVCDEPHPLLVKSMLEHCVNANIDEAYKIIEQLWSLGYSPEDIIGNIFR
VCKTFQMAEYLKLEYIKEIGYTHMKVAEGVNSLLQMAGLLGRLCSKTAAPDAS
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atggatgttgaaatgaaagaagcagacattgaacaaagtcaagccgacggaccgcctaaa
aaggatgatactgcaccgaaatcatcaacgaatgcttatgaactaccatgggttgaaaaa
tacagacctctgaagttgaatgaaatcgttggaaatgaggaaactgtcagcagactggag
gtgtttgcaagagaaggaaatgtgcccaacatcatcatcgctggtcctcctggcactgga
aaaacgaccagtattttgtgtttggccagagctcttcttggtccagccatgaaagacgct
gtgcttgagttgaatgcctcaaatgaccgtggaattgatgtagtgagaaacaaaatcaaa
atgtttgcccagcaaaaggtcacactccctaaaggtcgccacaagatcataatcttggat
gaggctgacagcatgacagatggagcccaacaggctctcagaagaaccatggagatctac
tccaaaaccacacgctttgctctggcatgtaatgcatcagataagatcattgagcccatc
cagtcccgctgcgcggtgctgcgttacagcaagctcagagacgaccagatcatgatgcgt
ctgacggaggtggttgagcaggagaacttacatgtcaccaacgacggcctagaggccatc
atcttcaccgcgcaaggggacatgagacaggctctgaataacttgcagtcaacaaattct
ggatttggttacatcaacagtgaaaatgtgtttaaggtgtgtgatgagccacatcctctg
ctggttaaaagcatgctggagcactgtgtcaacgccaacattgatgaagcctacaagatc
attgagcagctttggtcactcggatactcaccagaggacatcattggaaacatctttaga
gtgtgtaagacctttcagatggctgaatatttgaagctggaatatattaaggaaattggc
tacacacatatgaaagtggcagaaggagtgaactctctgttacagatggctgggctgttg
ggtcgcctgtgcagcaagactgctgcacctgatgccagctaa
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