Carassius gibelio (silver crucian carp): 127942483
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Entry
127942483 CDS
T08819
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgib04131
]
127942483
Membrane trafficking [BR:
cgib04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
127942483
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
LRR_1
ig
LRR_LRWD1
Ig_2
LRR_14
LRRNT
Cupin_1
V-set
LRR_9
Ig_6
Ig_C17orf99
LRR_Zer-1
Motif
Other DBs
NCBI-GeneID:
127942483
NCBI-ProteinID:
XP_052394158
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All DBs
Position
A22:complement(10909376..10937645)
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AA seq
605 aa
AA seq
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MAGCPSLSLPELFVLLIAASLTHGQTCPQRCDCIPHQRTVMCQNKHLDSIPGFIPADTRL
LDLSCNSLRWVEYNDLATLSRLEELDLSENLISVLEPNAFSSLLNLRVLRLRANQLKLVP
MGAFSRLSNLTTLDLSGNKLVILLDFTFQDLKNLRNLEVGDNDLVYISNKAFIGLVGLRE
LTIERCNLTSISGQSLSYLRSLVTLRLRYLSIASLEDQNFRKLGGLRGLEIDHWQFLEYI
SPHSFQGLNLSWLSITNTNISTVPTGALRNLIHLASLNLSYNPISVLESWALRDLVRLKE
LHLVGTNLILVQPYGLGGLQQIRLLNLSNNGLVTLEEGSFHSVNTLETLRVDSNPLSCDC
RLLWILQRRKTLNFDGKSPVCATPVELQGKTLSTFSDSALFDHFTCQRPKIRNRKFQQLT
AREGQVVSFVCQAEGDPTPVIFWISPQRRRITTKSTGRVIVLPEGTLEIRYAQVTDSGTY
ICIASNAGGNDTYFATLTVSGLPLDGALAANRTYYVGDLNDTNLNDTRVFLKFTLDLKTI
LVSTAMGCIMFLGVVLFCFILLFVWSRGRGQHKNNFSVEYSFRKVDGPTASGGQGGARKF
NMKMI
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggcgggttgtccaagcctgagcttaccagagctgtttgtgctcctaattgctgcatcc
ctaacacatggccaaacctgcccacagcgctgtgactgtatccctcatcagagaaccgtg
atgtgccagaacaaacacctggactctattcctgggttcatcccggctgacacacggttg
ctggatctgagctgcaacagtttgcgctgggtggaatataatgacttggcgaccctgtcg
agacttgaagagctagacttgagcgagaacctcatcagtgtgttggagcctaacgctttc
tccagcttgcttaacctgagagtgttgcgtctgagagccaaccagcttaaactcgtgccc
atgggtgccttttcacgtctcagcaacctcaccactctggacctaagtgggaataaactg
gtcatcctgttagatttcaccttccaggacttgaagaacctccgcaatttggaggtcggt
gataatgacctggtgtacatttcaaacaaggctttcataggattggtgggactccgggag
ctaaccatcgagaggtgcaatctgacctctataagtggacagtctctctcctaccttcgc
agtttggtgactcttcgattacgctacctcagtatcgcttcgttggaagaccagaacttc
cgcaaacttggtggactgcggggtcttgagattgaccattggcagttccttgagtacatc
tctcctcatagcttccaaggtctcaacctttcttggctctcgattaccaacaccaacatt
tccaccgtgcctacgggtgctcttcgcaacctaattcacttggctagcctcaatctgtct
tacaaccccatttcagttcttgagtcctgggccttgcgggatctcgtccgcttgaaggaa
ctacacctagtgggtacaaacctgatattagtacaaccttacggtcttggaggcctgcaa
cagatacgattgctcaacttgtcaaacaatggattagtgaccctggaggagggatccttc
cactcggtcaacacgctggagacgttgcgtgtagatagcaaccctttgtcttgtgattgc
cgcctactgtggatcctgcagcggaggaagaccctcaactttgacggaaagtcacctgtt
tgtgccacacctgtggagttgcaaggaaaaacactaagtaccttctcggactctgcactt
tttgaccatttcacctgtcagcggcctaaaattcgcaaccgcaaatttcagcagctgacg
gcacgtgaaggccaggtagtgtcatttgtatgtcaggcggaaggagacccaactccggtc
atcttttggatttcacctcagcgccgacgtatcaccaccaagagtactgggcgagtgatt
gtcctgcctgaaggtacgctggagatccgttacgcccaggttacagacagcgggacctac
atctgcatagcaagcaatgctggtggtaacgatacctactttgccaccctgacagtcagt
ggattgccattggatggtgctttggcagccaatcgcacctattacgtgggtgatcttaat
gacacgaacttaaacgacacacgtgtcttcctcaagttcacgttggacctcaagaccatc
ctggtgtccacagcaatgggttgtattatgtttctgggtgttgtgcttttctgtttcatt
ctcttgtttgtgtggagccgaggacgaggtcagcacaagaacaatttctcagttgagtat
tcgttcagaaaggtagatggtcccaccgccagcgggggacaaggaggggcacgaaagttc
aacatgaagatgatataa
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