Carassius gibelio (silver crucian carp): 127942597
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Entry
127942597 CDS
T08819
Name
(RefSeq) collagen alpha-1(VIII) chain-like
KO
K23455
collagen type VIII alpha
Organism
cgib
Carassius gibelio (silver crucian carp)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
127942597
NCBI-ProteinID:
XP_052394379
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Position
A22:complement(14770308..14780922)
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AA seq
737 aa
AA seq
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MAGPLLSARLFVLVEQFCLLYHIHAGAFYSHKSLPQQHQPLPQLPLLSHGNEGIPQQIPQ
YHYHGKEMQHLPYGNEMPLLPQYAKERPQAPMHMGKPIVGKGETIPRGEKGPPGEPGPKG
VPGPQGPPGLPGHGIPGPTGKPGPQGPPGLPGIGNPGMPGLPGKPGGIGLPGPKGELGPI
GGEGPIGMPGPPGLPGPHGLPGVSKPGAQGFPGQPGPRGEPGQKGFPGNHGLPGPKGENG
IGLPGLPGEKGHPGPPGPPGQVGLPGVGKPGLNGLPGAPGAQGKPGAPGEPGLAGVPGER
GPPGPSGLPGFGKPGLDGLPGKPGIPGGRGESGPSGLPGVPGLPGFGKPGYPGPKGEKGH
GGLPGPQGPKGEKGDGGLPGMTGPPGPSGLPGPPGLLGQPGGIGFPGPKGEGGAVGPKGQ
LGPKGEPGPPGLPGKPGFPGELGQPGLRGLPGPIGPKGENGHNGLPGLPGAPGKPGAKGE
VGFPGEKGHPGPMGIPGLMGQAGPIGPPGLPGPKGEYGPPGFPGMPGEGITGLPGPTGPP
GIPGAGGLPGQPGIPGPPGPPGLPGPPAESPFIGQILPETDPGIDGAKGSYKKEMPGRAS
IGSIGIEMPAFTAQLTTPFPPVGQPVVFNKILYNGNQNYNSQTGIFTCKIPGIYYFAYHV
HCKGNNVWVALYMNNEPVMYTYDEYKKSYLDQASGSAVLPLQVGDTVHIHLPSDQAAGLY
AGPYVHSSFSGYLLYPI
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atggccgggcctctcctctctgcccgcttgtttgtacttgtggagcaattctgtctgcta
tatcatatccatgcaggggcattttatagtcacaagtcattgccccaacagcatcagcct
ctgccacagttacctcttctgtcacatggcaatgaggggataccccaacaaataccccaa
taccattaccatggaaaggaaatgcaacacttaccatatggaaatgagatgcctttgctt
ccacagtatgcaaaagaacgtccacaggcacccatgcacatgggtaaacctattgtggga
aaaggtgaaaccattccaagaggagagaaaggtcctcctggtgagcctggtccaaaggga
gttccagggcctcagggccctccaggacttcctggtcatggtatcccaggacctacaggt
aaacctggtcctcaaggtccaccaggactcccaggaattggaaatccaggaatgccaggt
ttaccagggaaacctggaggtataggtttaccaggaccgaagggtgagttgggaccaatt
ggtggtgaagggccaataggaatgccaggacctccaggtcttccagggccacatggctta
ccaggtgtgtcaaaaccaggtgcacaaggatttccaggacaacctggacctcgtggagaa
cctggacaaaaaggcttccctgggaaccatggtctccctgggccaaaaggtgagaatggg
attggcctcccaggactgccaggggaaaagggacatcctggacctccaggaccaccaggt
caagtaggactaccaggagttggcaaaccaggactgaatggactacctggggctcctgga
gcccagggtaaacctggtgcacctggagaaccaggactggcaggagtcccaggcgagaga
ggaccaccaggaccatcaggactgccaggctttggcaaacctggtttggatggcttgcca
gggaaaccaggtattccaggtggaaggggcgagtcaggtccctctggtttacctggagtc
ccaggcttgcctggttttggcaaacctggatatcctggccctaaaggtgaaaaagggcat
gggggtttacctggcccccaaggcccaaaaggtgaaaagggtgatggtggtcttcctgga
atgactggaccaccagggccaagtggccttccaggacctccaggtctcttgggacaacct
ggaggtattggtttccctggtccaaaaggagagggtggtgcagtaggacctaagggacaa
cttggtccaaaaggtgaaccagggcctccaggacttccaggcaagccaggattcccagga
gaattgggacaaccaggacttagaggcttaccaggtcccataggacctaaaggtgaaaat
ggacataatggcttacctggcctacctggagcccctggaaagcctggcgcaaaaggagag
gttggattcccaggagagaaaggtcatccagggcctatgggaatcccaggattaatgggt
caagcaggaccaataggcccacctggtctaccaggcccaaaaggggaatatggaccacca
ggattccctggaatgccaggggagggaataactgggcttccaggcccaacaggcccacct
ggtatacctggagctggtgggctgccaggtcaacctggaatacctggtcctcctggccca
cctggcctaccaggacctcctgctgaatctccatttattgggcaaatccttcctgagaca
gatcctgggatagatggggcaaaaggtagttacaagaaagaaatgcctggaagagccagt
attggtagtattggcatagagatgcctgcttttacagctcagctgacaacaccatttcca
ccagttgggcaacctgttgtcttcaacaagattttatataatggtaaccagaattacaac
tctcaaactggcatcttcacttgcaaaatacctggaatttactactttgcttaccatgtt
cattgcaaaggaaacaatgtatgggtggcattgtacatgaacaatgagccagttatgtat
acatatgatgaatataaaaaaagttacctggatcaggcatcagggagtgcagtgctgccc
ttacaagttggagacactgttcatatccatttaccatcagaccaagctgcaggactttat
gctggtccatatgtccactcatcattttctggatatttgttatatcccatttga
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