Carassius gibelio (silver crucian carp): 127942618
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Entry
127942618 CDS
T08819
Name
(RefSeq) protein SEC13 homolog
KO
K14004
protein transport protein SEC13
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03013
Nucleocytoplasmic transport
cgib04141
Protein processing in endoplasmic reticulum
cgib04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
127942618
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
127942618
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
127942618
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgib03019
]
127942618
04131 Membrane trafficking [BR:
cgib04131
]
127942618
Messenger RNA biogenesis [BR:
cgib03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
127942618
Membrane trafficking [BR:
cgib04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
127942618
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
127942618
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
127942618
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
127942618
NCBI-ProteinID:
XP_052394410
LinkDB
All DBs
Position
A22:15605504..15612469
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AA seq
320 aa
AA seq
DB search
MVSVINTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVKNGGQILVADLRGHEGPV
WQVAWAHPMYGNILASCSYDRKVIIWREENGTWDKMYEYTGHDSSVNSVCWGPHDFGLFL
ACGSSDGAISVLTCSGDGHWDVKKINNAHTIGCNAVSWAPAVVPGSLIEQPTGQKPNYIK
RFVSGGCDNLVKLWKEEDGQWKEDQKLEAHSDWVRDVGWAPSIGLPTSTIASCSQDGRVF
IWTCDDPAGNTWTAKLLHKFNDVVWHVSWSITGNILAVSGGDNKVTLWKESVDGQWACIS
DVNKGQGAVTSITDSQQNEQ
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggtttccgtcattaacacagtggacacctcacacgaggacatgatccatgatgctcag
atggattattatggcaccaggctggccacctgctcctctgatcgctctgtgaagatcttc
gacgtcaaaaacggagggcagatcctcgtggctgatctgaggggtcatgagggtccagtg
tggcaggtggcctgggctcaccccatgtacggcaacatcctggcatcctgctcctacgac
aggaaggtgatcatctggagggaggagaacggcacctgggacaagatgtatgaatacacc
ggccacgactcctccgtgaactctgtttgttgggggccgcatgacttcggcttgtttctg
gcctgtggcagctcagacggggccatttctgtgttgacctgctctggagatggacactgg
gatgttaagaagatcaacaatgcacatacaatcggctgtaacgctgtgagctgggcccca
gctgttgttccagggagtcttattgagcagccaacaggacagaagccaaactacatcaag
agatttgtgtctggaggctgtgacaatctggtcaagctttggaaggaagaggacggccag
tggaaagaggaccagaagctggaagcgcacagtgattgggtgagagatgttggctgggct
ccttccattggtctgccgaccagcacaatcgccagctgctcacaggacggtcgtgtgttc
atctggacgtgtgacgacccagccggtaacacctggacggctaaactgctccacaaattc
aatgacgtggtgtggcacgtgagctggtccatcacaggaaacatcctggctgtgtcagga
ggagacaacaaagtgaccctgtggaaggagtcagtggacggacagtgggcttgtatcagt
gacgtcaacaaaggccagggggccgtgacctccatcacagacagccaacagaacgagcag
tga
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