KEGG   Carassius gibelio (silver crucian carp): 127942618
Entry
127942618         CDS       T08819                                 
Name
(RefSeq) protein SEC13 homolog
  KO
K14004  protein transport protein SEC13
Organism
cgib  Carassius gibelio (silver crucian carp)
Pathway
cgib03013  Nucleocytoplasmic transport
cgib04141  Protein processing in endoplasmic reticulum
cgib04150  mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:cgib00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    127942618
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    127942618
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    127942618
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cgib03019]
    127942618
   04131 Membrane trafficking [BR:cgib04131]
    127942618
Messenger RNA biogenesis [BR:cgib03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     127942618
Membrane trafficking [BR:cgib04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    127942618
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    127942618
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    127942618
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 NBCH_WD40
Other DBs
NCBI-GeneID: 127942618
NCBI-ProteinID: XP_052394410
LinkDB
Position
A22:15605504..15612469
AA seq 320 aa
MVSVINTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVKNGGQILVADLRGHEGPV
WQVAWAHPMYGNILASCSYDRKVIIWREENGTWDKMYEYTGHDSSVNSVCWGPHDFGLFL
ACGSSDGAISVLTCSGDGHWDVKKINNAHTIGCNAVSWAPAVVPGSLIEQPTGQKPNYIK
RFVSGGCDNLVKLWKEEDGQWKEDQKLEAHSDWVRDVGWAPSIGLPTSTIASCSQDGRVF
IWTCDDPAGNTWTAKLLHKFNDVVWHVSWSITGNILAVSGGDNKVTLWKESVDGQWACIS
DVNKGQGAVTSITDSQQNEQ
NT seq 963 nt   +upstreamnt  +downstreamnt
atggtttccgtcattaacacagtggacacctcacacgaggacatgatccatgatgctcag
atggattattatggcaccaggctggccacctgctcctctgatcgctctgtgaagatcttc
gacgtcaaaaacggagggcagatcctcgtggctgatctgaggggtcatgagggtccagtg
tggcaggtggcctgggctcaccccatgtacggcaacatcctggcatcctgctcctacgac
aggaaggtgatcatctggagggaggagaacggcacctgggacaagatgtatgaatacacc
ggccacgactcctccgtgaactctgtttgttgggggccgcatgacttcggcttgtttctg
gcctgtggcagctcagacggggccatttctgtgttgacctgctctggagatggacactgg
gatgttaagaagatcaacaatgcacatacaatcggctgtaacgctgtgagctgggcccca
gctgttgttccagggagtcttattgagcagccaacaggacagaagccaaactacatcaag
agatttgtgtctggaggctgtgacaatctggtcaagctttggaaggaagaggacggccag
tggaaagaggaccagaagctggaagcgcacagtgattgggtgagagatgttggctgggct
ccttccattggtctgccgaccagcacaatcgccagctgctcacaggacggtcgtgtgttc
atctggacgtgtgacgacccagccggtaacacctggacggctaaactgctccacaaattc
aatgacgtggtgtggcacgtgagctggtccatcacaggaaacatcctggctgtgtcagga
ggagacaacaaagtgaccctgtggaaggagtcagtggacggacagtgggcttgtatcagt
gacgtcaacaaaggccagggggccgtgacctccatcacagacagccaacagaacgagcag
tga

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