Carassius gibelio (silver crucian carp): 127942662
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Entry
127942662 CDS
T08819
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein M-like isoform X1
KO
K12887
heterogeneous nuclear ribonucleoprotein M
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127942662
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cgib03041
]
127942662
Spliceosome [BR:
cgib03041
]
Common components
Common spliceosomal components
hnRNP proteins
127942662
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_MARF1
RRM_5
RBD_DEAH11
RRM_3
DUF7552
Motif
Other DBs
NCBI-GeneID:
127942662
NCBI-ProteinID:
XP_052394476
LinkDB
All DBs
Position
A22:9289160..9298737
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AA seq
582 aa
AA seq
DB search
MKKAAEKVNRHVMNGRRLKVKEDPDGVIAQLEANRGHGGGGPPGMGGGMGGGMGGGMGGG
MGGGMGGGMGGGMGGGMGMGPGPGGPSMVNIPPSLMNNPNIPNEIIHGLQAGKIGSTIFV
ANLDYKVGWKKLKEVFGMAGVVVRADILEDKDGKSRGMGTVTFDMPIEAVQAVSMFNGQL
LFNRVMHVKLDEKSLPKGDFAPPDHPPALPRGLSGIGLGLGPGGQPIDATQLNRGGMGNM
GPGGMDGLGFGGMGRMGGMDNFGGGMNNMDRFGPSGMGRMNDMDRGIGGGFDRDFGARND
MGMSRSNFGDAFDRGMGNSMGMDRMNSGMDRLGGGIDRMGGPDRMGMDRMDRMPDLDRLG
SGFDRMGSGIDRLGPSMDRLGSGLDRMSSSVDRMGPGGFDRLGTSGMDRMTGGMDFASPI
GMDRMNPGLDRIGSNFDRMGAGGMDRFPSSGLDRMGSSMDRMGSGGVGGQFDRPADMDRA
NFGTPFSGSGQGGPGAGGANVRKGCQIFVRNLPFDFTWKMLKDTFNSCGIVQYADIKMEN
GKSKGCGVVRFDNPETAERACRTMNGYRLSGREIDVRIDRNA
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaggctgcagagaaagtcaacagacatgtcatgaacggtcgtcgtctcaaggtc
aaagaggatccagatggagtgattgcccagcttgaagctaatcgtggtcatggtggtggt
ggaccccctggcatgggtggaggcatgggtggaggcatgggtggaggcatgggaggaggc
atgggaggaggcatgggaggaggcatgggaggaggcatgggaggaggcatggggatgggc
ccagggcctggcggtccttcaatggtcaatatccctccaagtcttatgaacaaccccaac
attcccaatgagatcatccacggactccaggctggaaaaatcggaagcaccatttttgtg
gccaatctggactacaaggttggatggaagaagctcaaggaggtgtttggaatggctgga
gtggttgtgcgtgcagatatcctggaggataaagatgggaaaagcaggggaatgggaacg
gtcacatttgacatgcccattgaagcggttcaagcagtctccatgttcaacggacagctt
ctcttcaatagggtcatgcacgtcaaactggatgagaaatctcttcccaaaggtgacttt
gcaccccctgaccatcctccagcacttcctcgtggtctgagtggtattggtctcggcctg
ggacccggcggtcaacccattgacgctacccagctcaaccggggtgggatgggcaacatg
ggaccaggaggaatggatggattgggatttggtggcatgggtagaatgggaggaatggat
aatttcggtggtggtatgaacaacatggatcgttttggaccctctggaatgggtcgaatg
aatgatatggatcgtggaatcggcggtggttttgatcgagattttggtgcccgtaatgac
atgggtatgtcacgtagcaacttcggagatgcttttgaccgaggaatgggaaactccatg
ggaatggatcgcatgaattctggcatggacaggcttggaggtggcattgaccgcatggga
ggaccggaccggatggggatggatcgcatggaccgtatgcctgatctggaccggttggga
tccggttttgaccgcatgggttcaggaattgaccgactggggcccagtatggatcgactg
ggatcaggccttgaccgtatgagctccagcgtggaccgcatgggccctggtgggtttgac
cgcttggggacatccggcatggatcgcatgactggcgggatggactttgcctcccctata
ggcatggacaggatgaaccctggccttgaccgaattggttcaaactttgaccgcatgggc
gcaggtggcatggaccgcttcccctcctcaggtcttgaccgcatgggttccagcatggac
cgtatgggctctggtggcgtcggtgggcagtttgatagaccggctgatatggatcgtgcc
aatttcgggactcctttcagtgggtctggacaaggagggccaggagctggtggagccaat
gtcaggaagggatgccagatttttgtcagaaatctgccctttgacttcacctggaagatg
ttgaaggacactttcaattcatgtggcatcgtgcagtatgcagatataaagatggagaac
ggcaagtccaagggctgcggtgtggtgcgctttgacaatcctgagactgccgagcgagcc
tgtcgtaccatgaacggctaccggctcagcggacgagagattgatgtcaggattgacaga
aatgcataa
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