Carassius gibelio (silver crucian carp): 127942686
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Entry
127942686 CDS
T08819
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cgib03016
]
127942686
Enzymes [BR:
cgib01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
127942686
Transfer RNA biogenesis [BR:
cgib03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
127942686
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GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
zf-U11-48K
Methyltransf_32
OrgC
Drf_GBD
Motif
Other DBs
NCBI-GeneID:
127942686
NCBI-ProteinID:
XP_052394519
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All DBs
Position
A22:complement(8681604..8684546)
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AA seq
472 aa
AA seq
DB search
MEGFVADGVSAPLPGRCAFYVAKKKRYCKMIVGSGKTFCGEHANAGEEESEKKRIPCPLD
PKHTVFEDNLAKHLKKCNSKEKPKPIYYVKDINAGSANEDEPIEEITIAERSKEELEKLI
VKLKTALKGLNTKLVEKILSHAALHEPLSDPKNGDSAFKHLKQQASILGNMEVLELLGPN
RCYIEFGAGKGKLSHWIHIALKAAENVNFLLVERSSTRFKVDGKHKNTGSTFDRLQVDIQ
HLDLSKVPLLRKKGLPIIGVGKHLCGAATDLALRCLFEHNCSDKDDEPPTKRIKLHQNEG
AGDFIKPVPSTEGRETGERLIVSGLAIALCCHHRCDWRHYVGKDFFTKRGLGPEEFAAFQ
RMSSWATCGMRKIGSNTTDKRSEHKTGEEEEHEICEDTLADPLNGLMSIEDREQIGWLCK
RLIDHGRVYYLQQKGFETNLKYYTSRDISLENVLLTAVPAANQNRDESQQPS
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggaggggtttgtggcagacggcgtgtcagcgcctttacctggacgatgtgctttttat
gtagcaaaaaagaaacgatactgcaagatgattgttggaagtgggaaaactttctgcggt
gaacatgcaaacgctggtgaagaagagagtgagaaaaaacgaataccctgtcctctggat
cccaaacacactgtatttgaagataatttggctaaacacctgaagaaatgcaactctaag
gagaaaccaaaacctatttattatgtgaaggatatcaatgctggttctgcaaatgaagat
gaacctatagaggagataaccattgctgagcgatccaaagaggaactggaaaagttgatt
gtgaaactcaaaactgcactgaagggactaaataccaaactcgttgaaaaaatcctctcc
catgctgctttacatgagcctctaagtgacccaaagaatggagattctgcctttaaacac
ctcaaacaacaggcttcaattcttggaaacatggaggttttagaactgctcggcccgaac
agatgctacatagagtttggagcagggaaaggaaaactctcccactggattcacatcgct
cttaaagcagctgaaaatgtgaattttttacttgtggaaaggtccagtactcgctttaag
gtggatggcaagcacaaaaatacaggctcgacgtttgataggcttcaggttgatattcag
caccttgatttatcaaaggtccctctcctgagaaaaaaaggacttcctattattggtgtt
gggaagcacctctgtggtgcagcaacagatctggcccttcggtgtttatttgagcacaac
tgctctgacaaagatgatgaacctccaacaaagcgcataaaactccatcagaatgagggt
gctggtgattttattaagcctgttccctcaaccgaaggcagggagactggcgaaaggctc
atagtgtcaggactggccattgctctttgctgccaccaccgttgcgactggagacactac
gtgggaaaagacttcttcacgaagagaggtcttggaccagaagagtttgctgcttttcag
cgcatgtcaagctgggccacttgtgggatgagaaaaattgggtccaatacaacggataaa
cgaagtgaacataaaacaggtgaagaggaagaacatgagatatgcgaggacactttagca
gatcccctcaacggtttgatgtccattgaagatcgggaacagatcggatggctttgtaag
cgtctgattgaccatggcagagtgtattaccttcagcaaaaaggctttgaaaccaacctg
aaatactacacaagcagagacatttcattggagaatgtgttactaacagccgttcccgca
gccaatcagaatagagatgaatctcaacagccttcttaa
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