Carassius gibelio (silver crucian carp): 127942708
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Entry
127942708 CDS
T08819
Name
(RefSeq) retinoblastoma-binding protein 5 isoform X1
KO
K14961
COMPASS component SWD1
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cgib03036
]
127942708
Chromosome and associated proteins [BR:
cgib03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
127942708
COMPASS/SET1 complex (yeast)
127942708
MLL-HCF complex
127942708
MLL3/MLL4 complex
127942708
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WD40
WDR55
Beta-prop_EML
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_IFT140_1st
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR19_1st
Beta-prop_SPT8
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_LRRK2
WDR54
Beta-prop_NUP159_NUP214
Beta-prop_WDR75_2nd
Beta-prop_SCAP
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_Vps41
Beta-prop_WDR11_1st
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-GeneID:
127942708
NCBI-ProteinID:
XP_052394578
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Position
A22:complement(1072045..1082129)
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AA seq
536 aa
AA seq
DB search
MNLELLESFGQNYPEEADGTLDCISMALTCTFNRWGTLLAVGCNDGRIVIWDFLTRGIAK
IISAHIHPVCSLSWSRDGHKLVSASTDNIVSQWDVLTGDCDQRFRFPSPILKLQYHPRDM
DKVLVCPMKSAPVLLTLSDAKHVVLPVDDDSDLNVVAAFDRRGDYIYTGNAKGKILVLNT
NTQDLVASFRVTTGTSNTTAIKSIEFARKGSCFLINTADRIIRVYDGREILTCGRDGEPE
PMQKLQDLVNRTPWKRCCFSGDGEYIVAGSARQHALYIWEKSIGNLVKILHGTRGELLLD
VAWHPVRPIIASISSGVVSIWAQNQVENWSAFAPDFKELDENVEYEERESEFDIEDEDKS
EPEQTGADAAEDEEVDVTSVDPIPAFCSSDEELEDYKALLYLPIAPEVEDPEENPFGPPP
DAAGQNAKPDDSSAHSGPGDKKQRQPSSDGGPPKKKIRTTTIELQGVPNDEVHPLLGVKG
DSKSKKKAAGRPKGSKGKDKDSPFRPKVCRDRAEGLGTPGNLISSMYKQHEVHGLD
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgaatctggagttgctcgagtcgttcgggcagaattatccagaggaggctgatggcacg
ctggactgcatcagtatggctctgacctgcacgtttaaccgctgggggacgctgctcgct
gtcggctgtaacgacggacgcatcgtcatctgggactttctgacgcgaggaatcgccaaa
atcatcagcgcacacatacaccccgtctgctcactcagctggagcagagacggacacaag
ctggtcagtgcctccacagataacatcgtgtctcagtgggacgtcctgacgggagactgt
gaccagcgctttcgcttcccctcgcccatcctcaagctgcagtaccacccccgagacatg
gacaaggttctggtgtgtcccatgaagtctgctcccgtcctgctcacgctgtccgacgcc
aaacacgtggtgctcccggtggacgacgactccgacctcaacgtggtggcagccttcgac
cggcgcggagactacatctacaccggcaacgccaagggaaagattctggtgctgaacaca
aacacacaggacctggtggcgtccttcagagtgaccacaggaaccagcaacaccaccgcc
atcaaatccatcgagttcgcacgcaagggcagctgtttcctcatcaacacagcggaccgc
atcatccgcgtctacgacggccgcgagatcctgacctgcggcagagacggagaacctgag
cccatgcagaagctgcaggacctggtcaacaggacgccgtggaagcgctgctgtttctcg
ggtgatggagagtatatcgtggcaggatcggcgcgacagcacgcgctctacatctgggag
aagagcatcgggaacctggtgaagatcctccacgggacgcgaggagagctgctgctggac
gtcgcttggcatccggtgcgtcccatcatcgcctccatctccagcggcgtggtgtccatc
tgggctcagaaccaagtggagaactggagcgcgtttgccccggactttaaagagctggac
gagaacgtggagtacgaggagagagaatcagagtttgacatcgaggacgaggacaagagt
gagccggagcagaccggagcggacgctgccgaggacgaggaggtggacgtcacgtccgtc
gatcccatcccagcgttctgcagcagtgacgaggagctggaggattataaagcgctgctg
tatctgcccatcgctccggaggtggaggaccctgaggagaacccgttcggtcctccaccc
gacgccgcgggtcagaatgccaagcccgacgatagctccgcccacagcggccccggtgac
aaaaaacagcggcagccgtcgtccgacggagggccacccaagaagaagatccgcaccacc
accatcgagttacaaggcgtcccaaacgacgaggtccatccgctgctgggcgtgaagggc
gacagtaagtccaagaagaaggcggcggggaggcccaagggatcgaaaggtaaagacaaa
gactctccgttcagacccaaagtctgccgggacagagcagaggggctggggacgccagga
aatctgatctcgtccatgtacaagcagcatgaggttcatggtttggactga
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