Carassius gibelio (silver crucian carp): 127942802
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Entry
127942802 CDS
T08819
Name
(RefSeq) UV excision repair protein RAD23 homolog B-like
KO
K10839
UV excision repair protein RAD23
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03420
Nucleotide excision repair
cgib04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
127942802
09124 Replication and repair
03420 Nucleotide excision repair
127942802
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
cgib03051
]
127942802
03400 DNA repair and recombination proteins [BR:
cgib03400
]
127942802
Proteasome [BR:
cgib03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
127942802
DNA repair and recombination proteins [BR:
cgib03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
127942802
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
UBA_7
Rad60-SLD
UBA_3
Crinkler
Rad60-SLD_2
Dsc3_N
UBA_2
OTU1_UBXL
Ubiquitin_5
Motif
Other DBs
NCBI-GeneID:
127942802
NCBI-ProteinID:
XP_052394723
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Position
A22:complement(2722612..2732866)
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AA seq
416 aa
AA seq
DB search
MLTITLKTLQQQTFKVEIDEELTVKALKEKIEEEKGQDAFPAVGQKLIYSGKILNDDIPL
KEYKIDEKNFVVVMVTKPKSAAPPQAPAPAPAAAATVSATIAETPAHPPSTPAPSAVPVS
TPPPAPVESAASADPPVTPVTAPPAASEDAAEKPEPVSTTPTPISEEENQAAQEEQAVAQ
SEASVTDELGLLEAAASILVTGQAYENLVTEIMSMGYEREQVIAALRASFNNPDRAVEYL
LMGIPTESEQPPQEVVQPPPVSNPTPPAPQRPQPPPATTGVESGAPQTSANPLEFLRTQP
QFQQMRQIIQQNPALLPALLQQLGRDNPQLLQQITQHQERFVQMLNEPQAGEAGAAEAPS
APQTNYIQVTPQEKEAIERLKALGFPEGLVIQAYFACEKNENLAANFLLQQNFDDE
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgctgacgatcactttgaagaccctccagcagcagactttcaaagtggagatagacgag
gagctgacggtaaaagctcttaaagagaagatagaagaagaaaaggggcaagatgctttt
ccagctgtcggtcaaaaactaatctattcaggcaaaattttgaatgacgatatacctcta
aaagaatacaagatagatgagaagaactttgttgtggtgatggttacaaagccaaaatct
gcagcaccgccacaagctcctgctcccgcaccggcagccgccgctacagttagtgcaacc
atcgccgaaacccctgcacatccaccctcaactcctgctccctccgcagtgcctgtatcg
acccctcctcccgctcctgtagaatcagcagcgtcagcagatccaccagtgacacccgtc
acagcgccccctgctgcttcggaggatgctgcagaaaagcctgagcctgttagcaccact
cccactccgatttcagaagaagagaaccaggcagcgcaagaagagcaggccgttgcccaa
tcagaggctagtgttacagatgagttgggtcttttggaagcagctgcgtccatattagtt
acaggtcaagcgtatgagaatttggtgacggaaatcatgtcgatgggttatgagagagaa
caggtgatcgccgccttgcgagccagtttcaacaatccggacagagccgtggagtacctg
cttatgggtattcccacagaatccgagcagcctccacaggaagtagtgcaacccccccca
gtgtcgaaccccacccctccagcaccacagcgacctcagccaccacccgccaccaccggt
gtggagtcgggagcgccacagacctcggcaaaccctctggagttcctcaggacccagcct
cagttccagcagatgcgtcagatcatccagcagaaccccgcgctcctgccggcgctcctg
cagcagctgggacgtgacaaccctcagctcctgcagcaaatcacgcagcatcaggagcgg
ttcgtgcagatgttgaacgagccacaagcaggcgaggccggagccgctgaagctcccagc
gcaccacagaccaactacatccaggtcacgccgcaggagaaggaggccatcgagaggtta
aaagctctgggttttccagagggactcgtcatccaagcctacttcgcctgcgagaaaaac
gagaacctcgccgcgaacttcctgctccagcagaactttgatgatgagtga
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