KEGG   Carassius gibelio (silver crucian carp): 127943133
Entry
127943133         CDS       T08819                                 
Name
(RefSeq) RNA polymerase II elongation factor ELL-like
  KO
K15183  RNA polymerase II elongation factor ELL
Organism
cgib  Carassius gibelio (silver crucian carp)
Pathway
cgib03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:cgib00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    127943133
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:cgib01009]
    127943133
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cgib03021]
    127943133
Protein phosphatases and associated proteins [BR:cgib01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     127943133
Transcription machinery [BR:cgib03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     127943133
    Little elongation complex (LEC)
     127943133
SSDB
Motif
Pfam: ELL Occludin_ELL Seryl_tRNA_N
Other DBs
NCBI-GeneID: 127943133
NCBI-ProteinID: XP_052395287
LinkDB
Position
A22:complement(11007665..11035547)
AA seq 622 aa
MAALKEEQCYGLSCGRVSNGSNISVYHVKLTDSALRAFEDYQSNKGLIAKPLIGFTGNQG
KISIPQSENPNELRMFTFYLSHVGKDNPQGSFDCIQQYITSEGSIQLDCLGGIQDKITVC
ATDDSYQKARQSMAQAEEETRSRGAIVIKPGGRYVGKRVQIRKPITGVSDASRRPTRPVI
ISSSQKKSPPRPLRERLVHLLALKPYRKPELLVRLTKDGLSPQDKETLDSLLQQVANLNS
KDNTFTLKDCLFKEVQKDWPGYTEVDQQILKRILVRKLCKAQSSVPVPVESPVSPHKEPA
SSSPSQKRPAAEFIDPLANKKPRISLLASKSAGLINGKLSSSNGKDSSSSQSAETSSSSL
FPPLEIPRPFDPLSDVSNDSNGRDCESQEAAVAERLSQPPLFAPHSTTQEEGLGTTSLAH
SSLDRSLTQSAQPSLHGKSKKKSKKHKDKDKSKEKDRDRERDLKKERRVEDRGLDEKKLC
DVTTSDRSPGLNGTCHSSSIPASSSEMADYLLKYTVISSQEQRQSYKNDFNAEYSEYRGL
HARIESITRQFTILDSELKQLQQGTDKYKTIHNQILGEYRKIKKTNPNYSQEKNRCEYLH
NKLAHIKKLIAEYDHQQLQNWH
NT seq 1869 nt   +upstreamnt  +downstreamnt
atggcggcgttaaaggaggagcagtgctacggactgtcctgtggaagagtgagcaatggc
agcaacatctccgtctatcacgtcaagctgactgacagtgcgctgcgagcgtttgaagat
taccagagcaacaagggcctgattgctaaaccactaataggattcactggaaaccaaggg
aaaatctcaataccgcagtcagagaatccaaatgagctgcgaatgtttacgttctacctg
tcccatgtgggaaaggacaatccccagggcagcttcgactgcattcagcagtatattaca
agtgaagggagcatacagctggactgcctgggaggaatccaagacaaaatcactgtatgc
gccacggatgactcctaccagaaagccaggcaaagcatggctcaggccgaggaggaaacc
cgcagccgcggagccatcgtcatcaagcctggcgggagatatgtgggtaagcgtgtacaa
atccggaagccgataactggtgtgtcagatgcgtcacgacggcccacacggccggtcatc
atctccagcagtcagaagaagagcccgccgcgaccgctgagggaacgactggtgcattta
ctggccctaaaaccctaccgcaaacccgaactgctggtgcggctcacgaaggacggcctg
tctcctcaggacaaggagacgctggacagcctcctgcaacaggtggctaacctgaatagt
aaggacaacaccttcacattgaaggattgtttgtttaaggaagttcagaaggactggcct
ggttatactgaggtggaccagcagattctgaagagaattcttgtacgaaaactgtgtaag
gctcagagcagtgtccctgtgcctgtggagagtccggtcagcccgcacaaagagccagcc
agcagctcgccctctcagaaacgacctgcagcagagttcatcgatcccctggccaataaa
aaacccagaatatcacttctagccagtaagtctgcagggctcatcaatggcaaactgagc
tcatccaatgggaaggactcatctagttctcaatcagcagagacgtcgtcaagctccctc
ttccctccgctggagatcccccgacccttcgaccccctttcggacgtcagcaacgactcc
aatggccgagactgtgaaagtcaggaggctgcggtggcagagagactgagtcagccccct
ttgtttgcccctcactccacaacgcaagaggaaggcctgggcacaacatccctggcccac
agcagcctggacaggtctctgacccagagcgctcaaccctccctgcatggcaagtcaaag
aagaagtccaaaaaacacaaggacaaagacaagtccaaggagaaagacagggaccgagaa
cgtgacttgaagaaggagaggagagttgaagaccgtggtttggatgagaagaaactgtgt
gacgtcacaacgagcgataggagcccaggtctgaacggaacgtgccacagctccagtatt
cctgcgtcttcatcagagatggcagactatttattaaagtacactgtcataagctcacaa
gagcagcgtcagagttacaaaaacgacttcaacgcagagtacagcgagtaccggggcctc
cacgcacggatagagagcatcacccgacagttcactatactcgactccgagctcaaacaa
ctccagcaaggcacagacaagtataagacaatccacaatcagatacttggagagtatcgc
aaaatcaaaaagactaatccaaactatagccaagagaagaaccgctgtgaatacctacac
aacaaactggcacatataaaaaaactgatagcagaatatgatcaccagcaactgcaaaac
tggcactaa

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