Carassius gibelio (silver crucian carp): 127943253
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Entry
127943253 CDS
T08819
Name
(RefSeq) rho guanine nucleotide exchange factor 18-like isoform X1
KO
K21066
A-kinase anchor protein 18
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
127943253
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgib04131
]
127943253
Membrane trafficking [BR:
cgib04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
127943253
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_16
RhoGEF
C1_1
PH
SOS1_NGEF_PH
PH_13
C1_2
Motif
Other DBs
NCBI-GeneID:
127943253
NCBI-ProteinID:
XP_052395536
LinkDB
All DBs
Position
A22:complement(5923563..5965760)
Genome browser
AA seq
1536 aa
AA seq
DB search
MADPPLHNSWPSFSWMKRWSFKRASDCKPCSQLRAQVSTPSSSSSLSPTSIPEDVFFSSS
PEDKIKFLTESNECSSEEDLLDLCSSLRDSEYFRDLQLGSCEPPDKQLLVLTSPVSDKGT
APLVPPASTPESRSRHSFTEFETHRDDTVISTGGEAMDRLVAIRNSEFQDYPESEQDEDS
DSDNFPTLVRSMSTSRRHSWEVPVSPIDLGRRFSLDTNGIDSDGEREDHCLAKSPHLPSP
SFSESSVEETTGAMESESSKTPQSSTPVKTVYARSEILATDEKSQADRVSRILETSKQAA
REAGEEQESEVGLQSVEGRSHVLMVQNVLQELKQYHGAKHRTSSTERKEGTGNFTWYEFL
TTEKDGEEEERPERLEKGTKVKRTLSSLKSRVTGSFNKDKGKTREKEQQKEKSRERDKDR
EKELRERVKVRRRSVSGHQLVPGSFSTWATCSLCSKTLQRKHGLQCLNCAVNVHKSCKNL
LPECSSKSKKTSNAAAPSHSQALRDPCSALTPVDGSSRTSRCASGMTVPPRGHNTQPATS
SNPTVSHNNSSSSITGEMDEVDAFRIKRPADDTVSLASTIPEPLIVEDAYYTNVRGELEA
ITQDFEVESWSLAVDQHFLKKYSKEMMKRQDVIYELIQTEIHHVRTLKIMLRVYARELRE
ALQLDDRRLDCLFPRLDSLLELHSHFLSRLRERRAESLQPGSECNYAIHKLSDILISQFS
GELGERMKESYGDFCSRHTEAVNYYKEQLQSNKKFQNLMRKISNLSIVRRLGIPECILLV
TQRITKYPVLLERILQNTEVGTEEHEGLAQALSLIKDAIVQVDSQVNLYEKEARLREIVS
KMEPKSLGKIKDGRVFRKEDLSQGRRKLLYEGMVNWKAASGRLKDILALLLTDVLVLLQE
KDQRYVFSTVDNKPSVISLQKLIVREVAHEERAMFLICASSNEPEMYEIHTSSKEDRNTW
ITHIRQAGESCPHIEERLFSEEEEARVARFREFQDRLTLKDAQIAQSLTEKLQLFAELAE
SVSGLEDASSRSRLLLRGDATDLQQGEQLLKGAITEAENLQNLLASVARESSPQTEGNQS
PSLSSLPRRADTFGGYDSIPSILPKNGSIKKKVPGAGGRSRDRSQRASSDPQLKRVYTCQ
DRDVLDEASSSGVLKMWSTGKFQESEFYERVLLLSQRLYSLQAIISQQDSHIELQRASLL
TAERDRPGSRNRGTDVLLEQEKQRNLEKHREELANFQRLQNQHRQEHARWERDREKHRRQ
AEAAEQRLKEREEECQRLEMRLAEERQELERQRQTYQQDLERLRESTRAIEKEKERLEQQ
RKLKKHNTVPNTSGLYAQEVGQLSSSSSFNGELLFGGAGEQTLPQKTLQRSSLSVSPADY
LERPKVHSRRESSCSILPAKAEVPIHLISTTNQLHKQGSVQQQIPTKLAALSKGKEKSGK
ARSSHHTNSSASGELKQMLPIKLSSRDSDEGHKARRPISPNQPQHSHSDSLSPPDAHTDA
QSSLTPAVLKTHSQTSQPTLSYTVSEEAAKEDVIYF
NT seq
4611 nt
NT seq
+upstream
nt +downstream
nt
atggcagatcctcctcttcacaactcctggccctcgttctcatggatgaaacgatggtcc
ttcaaacgagcctcagattgcaaaccatgctcgcaacttcgtgcccaggtctcaacaccc
agctcatcctcgtccttgtccccgacctctattccagaagacgtcttctttagcagttca
cctgaggacaagataaagttcttgactgagagcaacgagtgcagcagtgaagaggacctt
ttagacctctgttcttctctgagagattcggaatatttcagagacctgcaactcggatcc
tgtgaaccaccagacaaacaacttctggtcttaacttcacctgtctctgacaaaggtaca
gcccctttggtacctcctgcatccacaccagaaagtcgatctaggcatagtttcacagag
ttcgagacccatcgagacgacaccgtgatttccaccggaggggaagccatggatcgctta
gttgctatcagaaactcagagttccaggattatccggaatctgagcaagatgaggactca
gactcggataactttcccacattggttagatccatgtccacatcgcgtagacacagctgg
gaagtgccagtgtcgccaattgacctgggaagaaggttcagtctagacactaatggcatt
gatagtgatggggaacgagaggaccactgtttggccaaaagtccccatctaccttctccc
tccttctccgaaagctcagtggaagaaacgacgggtgctatggaaagtgaaagctccaaa
acaccacagtcatctacaccagtgaagacagtatatgccagatcagagattctcgcgact
gatgaaaaatcccaagctgacagagtctcccgcatactggagacttctaagcaggcggcc
agagaagctggagaagagcaggagtcggaagtgggtctgcagtcagtggaaggacggagt
catgtgctgatggtacagaacgttctgcaggagcttaagcagtatcatggagctaaacac
agaacttcaagcacagaaagaaaagaggggacagggaatttcacttggtatgagtttctt
accactgaaaaggatggagaggaggaggaaagacctgagcgtctggaaaaagggaccaaa
gtcaagcggactctgagctcactgaagagccgtgtgactggatccttcaacaaagacaaa
ggtaagactcgagagaaagagcagcagaaagaaaagagcagagagagagacaaggacaga
gagaaagagttgcgtgagcgtgtgaaagtgcggcggcgcagcgtgagcggccaccagctc
gtgcctggctcgttctccacctgggccacatgttcactgtgcagcaagaccctgcagagg
aagcatggtctgcagtgcttgaactgtgccgtcaacgtccacaagagctgcaagaacctg
ctgcccgagtgcagcagcaagagcaagaagacgtcaaacgcagccgctccgtcacacagt
caagctctgagggacccctgctctgccctgacccccgtcgatggctcgtcccggacgtct
cgctgtgcttcaggtatgaccgtaccacccagaggacacaacacccagccagccacctcc
agcaaccctacagtcagccacaacaacagcagcagctctatcacaggagagatggatgaa
gtcgacgcattcagaataaagcgccccgctgacgatacggtgtctctcgcttccacgata
cccgaacctctcatcgttgaagatgcgtattacaccaatgtacgaggggaactggaagcc
atcacacaagacttcgaggtggagtcctggagtctggctgtggatcagcacttcttaaag
aaatattcgaaggaaatgatgaagagacaggatgttatatatgagctcatccagacagag
atacaccacgtgcggacgctcaagatcatgctccgtgtttacgctcgagaactgcgggag
gcacttcagctggacgacaggaggctggactgtctgtttccccggctggacagcctgctg
gagctgcatagccacttcctgtcccgtctccgggagcgtcgcgcagagtccctgcagccg
ggcagcgaatgcaactatgccatccataaactctcagatatccttatatcccagttttcc
ggagagcttggagagcgaatgaaggaaagttatggggatttctgcagtcggcacaccgaa
gcagtcaactactacaaagagcagctgcagagcaacaagaagttccagaacctcatgaga
aaaatcagtaatctgtcaatagtgcggcggttaggcataccagagtgcatcttgctggtg
acacagcgaatcaccaaataccccgttcttctggaacgcatcctgcagaacacagaagtt
gggacagaggaacatgaaggattagcgcaggctctcagtctaatcaaagacgccatcgtt
caggtggactcccaggtcaatctctatgagaaggaagcgcggctcagggagatcgtctcc
aagatggagcccaagtcactggggaaaatcaaagacggacgtgttttccggaaggaggac
ctttctcagggccgccgcaagctcttgtacgagggcatggtcaactggaaagccgcatct
ggtcgacttaaagatattcttgctctacttcttaccgatgttctcgtcttattgcaagaa
aaagatcagagatacgtgttctcgactgtggacaacaagccttccgttatttcactgcag
aagttgattgtgcgtgaggtggcacacgaggagcgggccatgttcctcatctgcgcctca
tctaacgaacctgagatgtacgaaatccacacgagctcaaaagaagaccgcaacacctgg
atcacccacattcgtcaggccggggagagctgtccacatatagaagagagattgtttagt
gaggaagaggaagccagagtcgcccgcttccgagagtttcaagatcggctgacgttgaag
gatgctcagatcgcccagagcctcacggagaagctgcagttgtttgcagagctggctgaa
tctgtgtccggtctggaggacgccagctctcgctcccgtctgctgctgcggggcgacgcc
acggacctccagcagggagagcagctgctcaaaggagccattactgaagcggagaacctg
cagaacctccttgcatctgtagctcgggaatcatctccacagaccgaggggaaccagagt
ccatccttgagttcactgccacgcagagcagacacctttggcggctacgatagcattcct
agcattctgcctaagaacggcagcattaagaagaaggttcccggagcaggcggcaggtca
cgggacaggagtcagcgggccagctctgatcctcagctcaaacgggtgtacacatgtcag
gaccgggatgtgctggacgaggcctcctcatccggcgtgctcaaaatgtggtccaccggt
aaatttcaggaatcagagttctatgagcgagtgctgctgctgtcccagaggctgtacagt
ttacaggccataatctctcagcaggacagccacatcgagctccagcgggcctctctcctc
accgccgagcgagaccgtcccggcagccggaaccgcggcacagacgtgctcctggagcag
gagaagcagcgcaacttggagaagcaccgcgaggagctcgccaacttccagaggctgcag
aaccagcatcggcaggagcatgcgcgctgggaacgggatcgggagaagcaccggcggcag
gcggaggcggctgagcagcggctgaaggagcgcgaggaggagtgtcagcgactggagatg
cgtttggccgaggagaggcaggagctcgagaggcagaggcagacataccagcaagacctg
gagaggctgagagagtccacacgtgccattgagaaagagaaagagcgattagagcaacag
aggaagttgaagaagcacaacactgtgccaaatacgtcaggactgtatgcacaggaagtt
ggacagctttccagttcctccagcttcaacggtgagctgctgttcggtggagcaggggag
cagacgcttcctcagaagacactccagcggagctctctctccgtgtccccggcagactac
ctggagcgtcccaaagtccactcgcgccgcgagagctcctgcagcatccttccggccaag
gcggaggttcccatccacctcatcagcaccaccaaccagctacacaagcagggcagcgtc
cagcagcagataccgactaaactcgccgcgctcagcaagggcaaggagaagagcgggaag
gccaggagttcgcaccacaccaacagttctgcttctggagaactgaagcagatgctgccc
atcaagctgtcatcaagggattcggatgaaggtcacaaagcacgccggcccatcagcccc
aaccaacctcaacattcgcactcagattccctcagccctccagatgctcacacggacgcc
caatctagcctcacgcccgccgttctcaaaacacacagccagacgtcccagcccaccctc
tcgtacactgttagcgaagaagctgccaaggaggacgttatctatttctaa
DBGET
integrated database retrieval system
