Carassius gibelio (silver crucian carp): 127943303
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Entry
127943303 CDS
T08819
Name
(RefSeq) Hermansky-Pudlak syndrome 3 protein isoform X1
KO
K20190
Hermansky-Pudlak syndrome 3 protein
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgib04131
]
127943303
Membrane trafficking [BR:
cgib04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
127943303
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HPS3_C
HPS3_N
Motif
Other DBs
NCBI-GeneID:
127943303
NCBI-ProteinID:
XP_052395611
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Position
A22:21051880..21061981
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AA seq
1036 aa
AA seq
DB search
MVHVYNCHPFASQHIVSAEQEPGLVCCGGGALFVVSAGGCRIEAYELQREGCPLICRFSS
MGSVLSIRHCAAGDYLVTIEEKNKATYLRAYTNWRYQAVEKTRVGVRLLGHLLRGSSFRG
TPKEQMEIIEIPLFEPPLCMACCSLTGDLLVGCAKSLVVFSLKRQTLSEQLSVLDFERVL
ILHIQGWSPSQVAFCAGYIALQTELEVLVIKLTPRQKSSAAAEEHTLLPEDIMSETSIDE
DAEMAKDGFSPLHAQEDFFLFPRHQEMLGNEAQECGISLVLEWTGMEAESQGDMSVVYVL
FRRFAPDFFQGCSVEETHLHSLQLHPMFTGKREDASISKGREPTCMFVFFSLPNTGYMYS
LKNTVELVSTYQYPEKTHQAVLSDHFLYIITRSALQCFTVRCSAVAARVDDPYIDTTMKA
CPPITMEVCALRIQLFIGLKLLCQDGNQIVLLTAADVDSKEDTERTARRNTESREHRALT
GILVAVGLEPSSSPTLENLLSRSFLSRKSSVCKPPEPSDSAHGWNLYVITSVSTLQLYRE
IVEYSKRYEQSSASSQSCVHLLSEGHLLLRTALLLQDCESAERAQLQQAFQESCAHLGDC
FSRFEKKDCHLALPYYKMSGLTVTDVIKRNMSSVSNGYGKGFIFFLKHSLYEETMEELSK
DMADKVLEIFSVAEPAQLPHVVSSPSMLNADPDRAVTHLRRLEASGAPSITLALCMASLA
LRKGDLHSYSQQMDRHAEMLQVYGFIEEPKLLLHGRGKAVLPTTLAQHLHHTHEGLLVAA
VVALHENSKIRLEEADLFFQELCKDGVEADSSPQLLVDFWEALLVASSHDAIIQELLFRL
TSVYIDRISRGDRSSVKALKTAEDLINSCSHYGVLCPWVSILTPVQFNITHHQEDLHKLQ
SLLCGPSLEVSSILPLLEQLSDSDPTGLSIHLLCATKLGQHETSINRLLDRCPEAIISYA
NHELQNHKLSLWWQKLFPEVCDRIRTGGKDNTVLLSALKETLVVAAKELNPLEFLDLLPD
DGAAHFFLPHLLQCSQ
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atggtccacgtctataactgtcacccgttcgcgtcccagcacatcgtgtcggcggagcag
gagcccgggctggtgtgctgcggcggcggggcgctgttcgtcgtgagcgccggaggctgc
aggatcgaggcgtacgagctgcagcgggagggatgtccgctcatctgccgcttcagcagc
atgggctccgtgctcagcatccgccactgcgccgcgggggactacctggtgaccatcgag
gagaagaacaaggccacatatctgcgggcctacactaactggaggtaccaggctgtggag
aagactcgtgttggggtgcgtctgctgggtcacctcctgcggggctcgtccttccgaggg
actcccaaagagcagatggagattatagagatccctctgttcgagccgccgctgtgtatg
gcctgctgcagtcttaccggtgatcttctggtgggctgtgccaagagtctggtggtcttc
agtctgaagcgtcagacgctgagcgagcagctctctgtgctggacttcgagagggtcctg
attcttcacatccagggctggagcccgtctcaggtggccttctgtgctggatacatagcg
cttcagacagagctggaggtgctggtgataaagctcaccccgcggcagaagagcagcgcc
gctgcagaggagcacacactgctgccagaagatatcatgagtgaaaccagcatcgatgaa
gacgcagagatggcaaaagatggattcagcccgctccatgcacaagaggacttctttctg
ttcccgaggcaccaggagatgctggggaacgaagcgcaggagtgtggcatctctttagtc
ctggagtggacgggtatggaggcagagagccaaggggacatgagtgtggtctacgtcttg
ttcaggcggtttgcgccggatttctttcaaggttgcagcgttgaggagacacacttgcat
tccttgcagctccaccccatgtttactggtaaacgggaagacgcctccatctccaaagga
cgggaacctacttgtatgtttgttttcttctccttgccgaacactggctacatgtacagc
ctgaagaacacagtggagctcgtgtccacctaccagtacccagaaaagacccatcaggct
gtgctcagtgaccacttcctctacatcatcaccaggagtgctctccagtgtttcactgtc
agatgcagcgctgtggcggctcgggttgatgacccatacatcgacaccaccatgaaggcc
tgtcctcccatcaccatggaagtgtgtgctctgaggatccagctcttcatcggcctgaag
cttctctgtcaggacggaaatcagatcgttctcctgacagcagcagatgtggacagcaaa
gaggacacggagaggacagcgcgcagaaacactgaatcgagggaacacagagccctgacg
ggcattttagtagctgtaggtctagagccgtcctcatcgcccaccctggaaaaccttctg
tccaggtccttcctatccaggaagagctctgtctgcaagcctccagagccgtctgacagc
gctcacggctggaacctctacgtcatcacgtctgtgtccactctgcagctctacagagaa
atagtggagtacagtaagcgatacgagcagtcgagcgcgtcgtctcagagctgtgttcac
ctgctgagcgagggtcacctgctgctgaggacggctctgctcctgcaggactgtgagtct
gccgagagagcacagctgcagcaggcctttcaggagagctgcgctcacttaggagactgc
ttcagcaggtttgagaagaaggactgtcacttggctcttccatactataagatgtcaggc
ctcactgtgacggatgttatcaagaggaacatgagcagcgtctcaaatggttatggcaaa
ggattcatcttcttcctgaagcattcgctctatgaggaaaccatggaggagcttagcaag
gacatggctgataaagtcctggagatcttcagtgtggctgaacccgctcagcttcctcat
gtggtgagcagcccgtccatgctgaacgccgatcctgaccgcgccgtgacccacctgaga
cgactggaggcgtccggcgccccgtccatcaccctggccctgtgtatggcctcgctggcc
ctgcgcaagggggacctgcacagctacagccagcagatggaccgccacgctgagatgctg
caagtgtacggcttcatagaagagcccaaactgctgctgcacggccgggggaaggccgtg
ctgcccaccacactggcccagcacctgcaccacacacacgaggggctgctggtggcggcg
gtcgtagcgctgcacgagaacagcaagatccgactggaggaggccgatctcttcttccag
gagctgtgtaaggacggcgtggaggctgacagcagtcctcagttactggtggatttctgg
gaggctctgttagtagcgtcctctcatgacgccatcatccaggagctgctgtttcgtctc
acatccgtctatatcgaccggatctcacgcggggatcgctccagcgtcaaagccctcaaa
accgctgaggatctgataaactcctgctctcattacggggtgttgtgtccgtgggtgagc
atcctgacacctgtccagttcaacatcacccaccaccaggaggacctgcacaaactacag
tctctgctgtgcggcccatcgctggaggtctcatccatcctgcctctgctggagcagctg
agcgactctgaccccacaggtctcagcatacacctgctctgtgccaccaaactgggccag
cacgagacctccatcaacagactcctagaccgatgtccagaggccatcatctcctacgcc
aaccatgagctgcagaaccacaaactgtctctgtggtggcagaagcttttccctgaggtc
tgtgacaggataaggacaggaggaaaggacaacactgtcctcctctcagcactcaaagaa
actctggttgtggcggccaaggagctgaacccgctggagttcctggacttgttgcccgat
gatggagcggctcatttcttcctgccacatctactccagtgcagccagtga
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