Carassius gibelio (silver crucian carp): 127944385
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Entry
127944385 CDS
T08819
Name
(RefSeq) cGMP-gated cation channel alpha-1
KO
K04948
cyclic nucleotide gated channel alpha 1
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
127944385
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cgib04040
]
127944385
Ion channels [BR:
cgib04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
127944385
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
CLZ
cNMP_binding
DUF3043
Sec62
Tim54
CDC45
MDM10
PFF1_TM
Piezo_TM1-24
Ion_trans_2
NPR3
Menin
CLN3
FAM60A
Motif
Other DBs
NCBI-GeneID:
127944385
NCBI-ProteinID:
XP_052396232
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All DBs
Position
A23:complement(25809657..25815212)
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AA seq
643 aa
AA seq
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MSARVRPLAPPTFHLEGVDQVAMATEDIIEKKHPDDGNNFNNNNNNEDEEKKKKKKEKKK
KEKKEKKEKKEKEKKNETEEKEKEKEKEKEKEKEKEKEKEKEQPKEIQVVDPAGNTYYNW
LFVITCPVMYNWVLIIARACYEELQTDYLMLWFILDFLSDLVYVLDMVFRTRTGYLEQGL
LVKDEKKLRDRYMQSIQFKLDLASMIPTDILYFYFGLNYPEIRMNKLLRVNRLFEFFQRT
ETRTNFPNVFRISNLVMYIVIIIHWNACMYYSFSKAMGFGTDPFVYPDTSDPEFGRLVRK
YAYSMYWSTLTLTTIGETPPPVKNAEYYFVVMDFLVGVLIFATIVGNVGSMITNANAARA
DFQARIDAIKQYMSFRKVTKDLEKRVIKWFDYLWTNKKAVDEREVLKYLPDKLRAEIAIN
VHLDTLKKVRIFADCEAGLLVELVLKLQPQVYSPGDYICKKGDIGREMYIIKEGKLAVVA
DDGVTQFVVLSDGSYFGEISILNIKGSRAGNRRTANIRSIGYSDLFCLSKDDLMEALTEY
PDAKAMLEEKGRQILMKDNLLDLELAKQGPDPKVMEEKVIKIGSVLDDLQTRFARLLAEH
EAAQGKLKKRITKLEKKITDSSGVALSEMLDPELVTAKKEEKE
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctcgagtgaggcctctggccccgcccacttttcacttggagggggtggaccag
gttgccatggccacagaggacattatagaaaagaagcacccagatgatggaaataacttc
aacaacaacaataacaatgaagatgaggaaaaaaagaagaaaaagaaagaaaaaaagaag
aaagagaaaaaagagaagaaagaaaaaaaagagaaggaaaagaaaaacgaaacagaagag
aaagagaaagagaaagagaaagagaaagagaaagagaaagagaaagagaaagagaaagag
aaagaacaaccaaaggagattcaggttgtggatccggcgggaaacacgtactacaactgg
ctctttgtgatcacgtgtcctgtgatgtacaactgggttctcatcatagcgagagcttgc
tatgaggaactgcagacagactatttgatgttatggttcatcctggatttcttatctgat
ctggtgtatgtgctcgacatggtgttcaggaccaggacaggatatctggagcaggggctc
ctggtgaaggatgagaagaagcttcgtgatcgctacatgcaaagcatccagttcaagctg
gacctggcttctatgattccaaccgatattttatacttctacttcgggctgaactaccca
gagattcgcatgaacaagctattgagggtcaatcgcttgttcgagtttttccagcgcact
gaaacacggactaactttccgaacgtgttccgaatctccaacctcgtcatgtacattgtg
atcatcatccactggaatgcctgcatgtattactccttctccaaggcaatgggcttcggg
acagaccctttcgtctacccggacacctcggacccagagtttggccggttggtgagaaag
tacgcatacagcatgtactggtccacgctcacgctcaccaccatcggtgagacgcctccc
cctgtcaaaaacgcagagtactacttcgtggtaatggacttcctggtcggtgtactgatt
tttgccaccatcgtcggtaatgtcggctccatgatcaccaacgcgaatgcggcacgagca
gatttccaggctcgcatcgacgctatcaaacagtatatgagcttccgaaaggtcaccaaa
gacctggagaaaagggtcattaaatggtttgattacttgtggaccaacaagaaagcggtc
gacgagagagaagtgctgaagtacctgccggacaagctgcgtgcggagattgctataaac
gtccacctggacactctgaaaaaggtgcgcatctttgcagactgcgaggccgggctcctg
gtggagctggtgctgaagcttcagccacaggtctacagccccggagactacatctgcaag
aagggagacatcggtcgcgagatgtacatcattaaagaaggaaagctggccgtggtggcc
gatgatggagtcacgcagttcgtggtgctgagtgatggcagttatttcggagagatcagc
atcctcaacatcaagggcagtagagcaggcaaccgaagaaccgccaacatccgcagcatc
ggctattcagacctcttctgcctgtccaaagatgacctgatggaggcgctaactgaatat
ccagatgccaaggccatgctggaggagaagggacgacaaattcttatgaaggacaatctt
ctggatttagagctggccaagcagggtcccgatcccaaagtcatggaggaaaaggtcatc
aagatcggtagcgtgctggatgatcttcagacccgcttcgcccgtctgttagcagaacac
gaagctgcacaaggcaaactgaagaagcgcatcactaaattagaaaagaagatcacagac
tccagtggagtggctctctctgagatgctggacccggaactggtgactgccaagaaagaa
gagaaagaataa
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