KEGG   Carassius gibelio (silver crucian carp): 127944425
Entry
127944425         CDS       T08819                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A1-like isoform X1
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
cgib  Carassius gibelio (silver crucian carp)
Pathway
cgib03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cgib00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    127944425
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cgib03019]
    127944425
   03041 Spliceosome [BR:cgib03041]
    127944425
Messenger RNA biogenesis [BR:cgib03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     127944425
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     127944425
Spliceosome [BR:cgib03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    127944425
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3 OB_RNB
Other DBs
NCBI-GeneID: 127944425
NCBI-ProteinID: XP_052396294
LinkDB
Position
A23:complement(22411950..22416913)
AA seq 412 aa
MSKEGQPREPEQLRKLFIGGLSFETTDDSLREYFEQWGTLTDCVVMKDPNTKRSRGFGFV
TYSNMCEVDAAMDARPHKVDGRLVEPKRAVSREDSNKPFAHTTVKKIFVGGIKDDTEEHH
LRDYFKEFGKLEAIEIMVDHKTGNKRGFAFVTFDDHDSVDRIVIQKYHTVNGHNCEVRKA
LSKQEMQNTGMNMRGRGGGGGGGGNFNRYGNNGGYNNDFGGNGGGNRDGYFGRGGRSGGG
GGGYGGDCYNNGFGGGDALCTAVTRETSISTTTTAEKEFANMLPTDYGGYGGGPGNYGGN
RGYGGGGGGGGHGYGNQGGGYGGGGGNSGGGYNDNYNNGNGNFGGGNFGGGGGGGGGNYN
DFGNYNSQQSNYGPMKGNFGGGGGRNSGPYGGGYGGGGSGGGYGGGSGGRRF
NT seq 1239 nt   +upstreamnt  +downstreamnt
atgtccaaagagggccagccacgtgagcctgagcagttgcggaagctcttcattggaggg
ctcagctttgaaaccacagacgatagtttgcgggaatattttgagcaatggggcacctta
acggattgtgtggtgatgaaagatccaaacaccaaacgctccagaggctttgggtttgtc
acttattccaacatgtgtgaggtcgacgctgctatggatgcacgaccccacaaggtcgac
ggtaggcttgtggagcccaaacgagccgtgtctcgagaggactccaacaagccatttgct
cacacaactgtgaagaagatctttgtgggtggcattaaggatgacactgaggagcaccat
cttcgtgattacttcaaagagtttggcaaacttgaggccattgagattatggttgaccac
aagaccggaaacaaaagaggctttgcctttgttacgtttgatgaccatgactccgttgat
cgtatcgtcattcaaaaataccacactgtgaatgggcacaactgtgaagtcagaaaagct
ctgtctaaacaagagatgcaaaacactggcatgaacatgagaggccgtggtggtggtgga
ggaggaggtggaaacttcaacagatatggcaataatggcggctacaacaatgactttgga
ggcaatgggggtggcaaccgtgatggctattttggaaggggaggcagaagtggtggagga
ggcggtggttatggaggtgactgctacaacaatggatttggcggcggagatgctttatgt
acagctgtcaccagggaaacctcaatctctaccactacaacagcagagaaagagtttgca
aatatgctgccaacggactatggtggttatggtggtggtcctggtaactatggtggaaac
cgtggatatggaggtggtggtggaggaggaggacatggttatggcaaccaaggcggtggt
tatggtggcggcggcggcaacagtggtggtggctataatgacaattacaacaatggcaat
ggaaactttggaggtggcaactttggaggtggtggcggcggtggaggtggtaactacaat
gactttggcaactataacagccagcagtccaactatggacccatgaaagggaactttgga
ggtggcggaggaagaaacagtggcccctatggtggtggctatggtggtggtggatctggt
ggtggatatggaggtggctctggtggcagacggttttga

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