Carassius gibelio (silver crucian carp): 127944499
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Entry
127944499 CDS
T08819
Name
(RefSeq) tuftelin-interacting protein 11-like isoform X1
KO
K13103
tuftelin-interacting protein 11
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cgib03041
]
127944499
Spliceosome [BR:
cgib03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
127944499
Other components
Complex C specific factors
127944499
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
127944499
NCBI-ProteinID:
XP_052396437
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Position
A23:complement(11829255..11835553)
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AA seq
832 aa
AA seq
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MSMSHLYGRRGEEEEEDGVEIEKFEVSEWDLANEFNPDRRRHRQTKEEATYGIWAEHDSD
DERPSFGGKRSKDYSAPVNFVSSGLRKTAAEEKVEQKGSGDSSDGGDAPPLPRAAAPKKL
QTGGRFKTSQRFAGGIRTGQDLGSWEKHTRGIGQKLLQKMGYVPGKGLGKNAQGIVNPIE
AKVRKGKGAVGAYGNERTQQSLQDFPVVDSEEEEEQEFQKELGQWRTEPGTAKKKPKYSY
KTVEELKAHGKLANRSMSRPAGELAQVKVIDMTGREQKVYHSYSHMSQKHSVPEEAPLSV
STREQKTPGFSLPELEHNLKLLIELTEQDILQSARQLQHDKDTVVTLTHESDALQVRLAE
EEQAIGRLEQVMNLVDRFDAGDKEDSPALGLQECATIFQQLQTEFYQEYKTLGLGDLAVS
VVHPLLKERLRSWDPLKDCSDGLEEVGQWRAILESSQSLHGGPDTNMDPYHRLIWEVWVP
VMRSCVSQWQPRNVGPMVDCVECWAPVLPLWILDHVLEQLIFPRLQREVDNWNPLTDTVP
IHSWIHPWLPLMQTRLEPLYAPIRSKLAHALQRWHPSDSSARLILQPWKDVFTSGAWEAF
MVKNIIPKLALCLGELVVNPHQQLLELFNWVMDWEGMLSVSTMVGLLDKNFFPKWLQVLC
SWLSNNPNYEEITKWYLGWKSLFSENLLSHPLIKEKLNEALDIMNRAVASGLGGYTQPGA
RENIAYLIQTQRKKDFQSEPQPERRDVENPATCPPGTTAVPASVPTNFKDLVQAKAEENG
IVFMPLVAKRHMGKQLYTFGKIVIYIERGVVFVQGEKTWVPTSLQSLIDMAK
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atgtctatgtcccatttgtatgggcgtagaggtgaggaggaggaggaggatggtgtggaa
atcgaaaagtttgaggtgtctgaatgggacttggccaatgagttcaacccagacagacgc
agacacagacagaccaaggaagaagcgacctatgggatttgggcagagcatgactctgat
gatgagcggcccagctttggggggaaaagatcgaaagactattcagctcctgtgaacttt
gtgagttctggcttaagaaagactgcagctgaggagaaagtggagcagaagggttcaggt
gactccagtgatggtggagatgctcctcctctaccccgtgctgctgctcccaaaaaactc
caaacgggtgggcgctttaagacatcccagagatttgcaggtggtatcagaacagggcag
gacttgggatcctgggagaaacacacaagaggcattggtcaaaaacttcttcagaagatg
ggttacgttccaggaaaaggattgggcaaaaatgctcaaggtattgtgaacccgattgag
gctaaagtgcgaaaggggaagggagcggttggtgcatatggaaatgagaggacccagcag
tccttgcaggattttcctgttgtagactctgaggaggaggaggagcaagagtttcagaag
gagttggggcaatggcgtacagaaccaggaacggcaaagaaaaagcccaaatattcttac
aagactgtggaagagctgaaagctcatggcaaactggccaacaggagcatgagcagacct
gctggagaactggctcaggttaaggtgatcgatatgactggcagagagcagaaggtgtat
cacagttacagtcatatgagtcagaagcacagtgttcctgaggaggcccctttgagtgtg
agcactcgagaacagaagacccctggcttctcattaccggagctggaacacaacctcaaa
ctgctcattgagctcacagagcaagacatcctacagagtgcacgacaactgcagcatgat
aaggacactgtggtgaccctgacccatgagagtgacgcgctgcaggtcaggctggcagag
gaggaacaggctattggtcggctggagcaggtgatgaacctggtggatcgtttcgatgca
ggcgataaggaggacagccctgcactcggccttcaggagtgtgctacgatcttccagcag
ctgcagacagagttctatcaggagtacaaaaccttgggtttgggggatctagctgtgtct
gttgtacatcctttattgaaagagagacttcgcagctgggatccactgaaggactgttca
gatggtttggaggaagtcggtcagtggagggccattcttgaaagttcacaatctcttcat
ggtggtccagacactaacatggacccctatcacaggttaatatgggaagtgtgggttcca
gtcatgaggagctgtgtgtctcagtggcagcctagaaacgtggggcccatggtggactgt
gttgagtgctgggcccctgtattaccgctgtggattcttgaccatgttttggagcagctt
attttcccacgactacagagagaggtggacaattggaacccactgacagacacggtacca
atccattcatggattcatccctggctgcctctgatgcaaacgcgtcttgagccactgtac
gcacccatccgcagtaaactagcccatgccctgcagcgctggcaccccagtgactcctcc
gccagactcattcttcaaccctggaaagatgtcttcacatctggtgcctgggaggccttc
atggtcaaaaatatcattcccaaattggctctttgtttaggagagctggtggtgaatcct
catcagcagcttctggagttgttcaactgggtgatggactgggaagggatgctctcggtc
tccaccatggttggactgctggataagaatttctttcccaaatggctacaggtgttgtgt
tcctggctcagtaacaacccaaactatgaggagatcactaaatggtatctgggctggaag
agtttgttctccgagaacctgctcagtcatccattgatcaaagaaaaactgaacgaggcc
cttgacatcatgaatcgtgctgttgcctctggactaggtgggtatacacaacctggagca
agagagaacattgcatatctgattcagacacagagaaaaaaagatttccagagcgagcct
cagcctgagcgccgtgacgtggagaatcctgccacatgtccaccaggcaccacagcagta
ccagcatctgtaccaaccaactttaaagatctagtccaggccaaagctgaggagaacggc
attgttttcatgccactggtggccaaaaggcatatgggcaaacagttatacacatttggc
aaaatcgtcatctacattgagcgtggagtggtctttgtccagggagagaaaacctgggtc
ccaacatcactacagagtctaattgacatggccaaatga
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