KEGG   Carassius gibelio (silver crucian carp): 127944528
Entry
127944528         CDS       T08819                                 
Name
(RefSeq) HBS1-like protein isoform X1
  KO
K14416  elongation factor 1 alpha-like protein
Organism
cgib  Carassius gibelio (silver crucian carp)
Pathway
cgib03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:cgib00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    127944528
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cgib03019]
    127944528
Messenger RNA biogenesis [BR:cgib03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     127944528
SSDB
Motif
Pfam: GTP_EFTU GTP-eEF1A_C GTP_EFTU_D3 HBS1_N GTP_EFTU_D2 MMR_HSR1 AAA_22 GTP_EFTU_D4 DO-GTPase2
Other DBs
NCBI-GeneID: 127944528
NCBI-ProteinID: XP_052396488
LinkDB
Position
A23:24538362..24565809
AA seq 682 aa
MSRHRNVRGYNYDEDFDDDDVYGQSVEDDYCISPATAAQFIYSRQDSRQARHVETLEEAE
YEEEEEMPTSPTVASTLDPLQQGRLYTCLDQMRAVLGDSIPDSTLTQAALKHDCDPHRAL
DFVLTEENTSTHAPPARTNSQPEPITTAAPQKAKAREAPESCVEAEVVPKVARMTVSGKK
QTMGFDVRSAEENGIGAPSVRRGPSPEVTTPPATENLSKPSAVNEDSTAPTPTRPTGKSK
QPLNIRAELEKRQGGKPLLNLVVIGHVDAGKSTLMGHLLYLLGNVNKRTMHKYEQESKKA
GKASFAYAWVLDETGEERDRGVTMDVGMTKFETDSKVITLMDAPGHKDFIPNMITGAAQA
DVAVLVVDASRGEFEAGFEAGGQTREHGLLVRSLGVTQLAVAVNKMDQVNWQQERFQEII
SKLGHFLKQAGFKDSDVFYIPTSGLSGENLTTRSKAADLTAWYTGPCLLEQIDAFKPPQR
SVEKPFRLCVSDVFKDQGSGFCVTGKIEAGFIQTGDKLLAMPPNETCTVKGITLHDEALD
WAAAGDHVSLTVTGMDIIKINVGCIFCDPKEPIRACTRFRARILLFNIEVPITQGFPVLL
HYQTVSEPATIRKLVSVLHKSSGEVLKKKPKCLSKGQNAVVEIQTQRPVALELYKDYKEL
GRFMLRYVGSTIAAGVVTEIKE
NT seq 2049 nt   +upstreamnt  +downstreamnt
atgtcccgtcacaggaatgtccgaggttataactacgacgaagactttgatgatgatgac
gtgtacgggcagtcagtggaagatgactactgcatctctcctgccactgccgcacagttt
atctattcacgtcaagactcgaggcaggctcgacatgtagaaactctggaagaggcagaa
tatgaggaggaagaggagatgcccacctctcccactgttgcaagcacgctagacccacta
cagcaaggtcggttgtatacttgtttggatcagatgagagccgtgctgggggattcaatt
ccagactccacattaactcaggcagctctgaaacatgactgtgaccctcacagagccctt
gattttgtactaactgaggagaacaccagtacacacgcccctccagccagaaccaactca
cagcccgagcccatcaccacagctgcaccacagaaagctaaagcacgggaggctccagag
agttgtgttgaagcagaggtcgtcccaaaggttgcccgcatgactgtgtcaggcaagaag
caaaccatgggctttgatgtgcgaagtgcggaagaaaatggcattggtgccccatcagtt
cgaagagggccgagtccagaggtcaccactccaccagccacagagaacctatccaaacca
tcagctgtgaatgaagactctactgccccaaccccgactcgaccaactggaaagagcaaa
cagccgctcaacatccgtgctgaactggagaagagacaaggaggaaaaccgttactcaac
ctggtggtcataggtcatgtagatgctggtaagagcactctcatgggtcatctcttatat
ctgctagggaacgttaataagagaaccatgcataaatatgagcaggagtccaagaaagct
ggcaaggcctcatttgcttatgcgtgggtactggacgaaacaggagaggagagagacaga
ggagtgaccatggatgtgggcatgaccaagtttgagactgactcaaaagttattactctg
atggacgcaccaggacacaaagacttcattccgaacatgatcacaggggcagcccaggca
gatgtggctgtgttagtcgtggatgccagccgtggggagtttgaggccgggttcgaggct
ggggggcaaacccgtgagcacggcctgcttgttcgatctcttggagtcacacagcttgct
gttgctgtcaacaagatggaccaggtgaactggcagcaggagaggttccaggaaatcatc
tcgaagctcggtcactttctgaagcaggctggttttaaggattccgatgtgttttacatc
cctaccagcggcctatcaggagagaatctgaccactaggagtaaagctgcagatcttaca
gcctggtacactgggccatgcctactggaacagatagatgcatttaaaccaccccagagg
tccgtggagaagccattcaggctttgtgtctcagacgtcttcaaagatcagggctctgga
ttctgtgtgactgggaagattgaggctggcttcattcagacaggagataaacttctggcc
atgcctcctaatgagacctgtactgttaaaggcatcactcttcatgatgaagctttagac
tgggcagctgctggtgatcacgtcagtctaactgtaactggcatggacatcatcaaaata
aatgttggatgtatattctgtgatcctaaagagcccatcagagcctgtacaagattccga
gcaagaattctactctttaatatagaggttcccatcacacaaggcttcccggtactgtta
cattatcagactgtgagcgaaccagccactattaggaagttagtcagtgtattacacaag
agcagtggagaagttctcaagaagaaaccaaagtgtttgagtaaaggacagaacgctgtg
gtggagattcagacacagaggcctgtggctctggagctctataaggactataaagaactg
ggacgcttcatgctgagatatgtgggctccaccattgctgctggagttgtcacagagatc
aaagagtaa

DBGET integrated database retrieval system