KEGG   Carassius gibelio (silver crucian carp): 127944584
Entry
127944584         CDS       T08819                                 
Name
(RefSeq) splicing factor U2AF 65 kDa subunit-like
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
cgib  Carassius gibelio (silver crucian carp)
Pathway
cgib03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cgib00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    127944584
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cgib03041]
    127944584
Spliceosome [BR:cgib03041]
 Complex A
  U2 snRNP components
   U2 related factors
    127944584
 Complex B
    127944584
SSDB
Motif
Pfam: RRM_1 RRM_occluded RRM_7 Transformer
Other DBs
NCBI-GeneID: 127944584
NCBI-ProteinID: XP_052396591
LinkDB
Position
A3:complement(6138630..6159408)
AA seq 466 aa
MSDFEEFEKQLNENRQERERERHKRRSHSSSAGHSKKQRSWSKDRSSRSRGKCSRSRERK
SRDHRSSSRDHKKHSYSPRRTRKKKMCKYWDVPPPGFEHITPMQYKAMQAAGQIPSIALL
AASTNVGLAVAPTQVPIVGSQMTRQARRLYVGNIPFGVTEESMAEFFNTQMRLAGLSQAP
SSPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYRPLPGISEQP
AFHVPGVVSTVVPDSPHKLFIGGLPNYLSDDQVKELLTSFGPLKAFNLVKDSATSLSKGY
AFCEYVDISVTDQAVAGLHGMQLGDKKLIVQRASVGAKNTNPTAVVETPVMLQVPGLQRV
QNSGLPTEVLCLLNMVMPEELLDDEDYEEILEDIREECCKYGTVRSIEIPRPVDGVEVPG
CGKIFVEYVSAAECQKAMQALTGRKFANRVVVTKYYDPDMYHRHEF
NT seq 1401 nt   +upstreamnt  +downstreamnt
atgtctgatttcgaggagttcgagaaacagctgaacgagaatcgacaagagagagaacgg
gagaggcataaaaggaggagtcatagtagctctgctggccacagtaagaagcagcgcagc
tggagcaaagacagaagcagtcgcagcagaggaaagtgcagccgcagtcgagagcgtaag
agccgtgaccacaggagcagctctagagatcataagaaacacagctattctccacgtcga
acaaggaagaaaaagatgtgcaagtattgggatgttccccctccaggctttgagcacatc
actccaatgcagtacaaagccatgcaagctgctgggcagatccccagcattgctctgttg
gctgcgtccactaatgttggtttggcagtcgctcccacacaagtgcccatcgttggcagt
cagatgaccaggcaagcgcgtcgtctgtatgttggcaacatcccgttcggcgtcactgag
gagtccatggctgaattcttcaatacccaaatgagacttgcagggctgtctcaagctcca
agcagtcctgtgctcgcagtgcagatcaaccaggacaagaactttgctttcttagagttt
cgatcagtggatgaaaccactcaggccatggcatttgacggcattatctttcaaggacag
tcgctgaagatcagacgtccacatgactaccgccctctgcccggcatttctgagcagcct
gcttttcatgtcccaggtgtcgtgtccacagttgtaccagactcccctcataaactcttc
attggaggtctgccaaattatctcagtgatgatcaggttaaagagctcctgacgtcattt
ggccctctcaaagccttcaaccttgtgaaagacagtgccacatcactgtccaaaggctat
gctttctgtgaatatgtggatatcagcgtcactgaccaagcggtagctggattacatggc
atgcagctgggtgataaaaagctcattgtccaacgggcaagtgtgggagccaagaacacc
aatcctaccgctgttgtagagacgcccgtcatgcttcaggtgccagggctgcagagggtg
cagaactcaggcctgccgacggaggtgctgtgtctgctgaacatggtcatgccggaggag
ctgctggacgatgaggactacgaggagatcctggaggacatccgggaggagtgctgcaag
tacggcaccgtgcgctccatcgagatccccaggcctgtggatggtgtggaggtgccaggc
tgcgggaagatattcgtagagtacgtgtctgctgcagaatgccagaaggccatgcaggca
ctgacaggacgcaagtttgctaaccgtgtggtggtcacgaaatactacgatccagacatg
tatcacaggcatgagttctga

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