Carassius gibelio (silver crucian carp): 127944622
Help
Entry
127944622 CDS
T08819
Name
(RefSeq) ubiquitin conjugation factor E4 B-like isoform X1
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04120
Ubiquitin mediated proteolysis
cgib04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
127944622
04120 Ubiquitin mediated proteolysis
127944622
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgib04121
]
127944622
Enzymes [BR:
cgib01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127944622
Ubiquitin system [BR:
cgib04121
]
Ubiquitin ligases (E3)
U-box type E3
127944622
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
127944622
NCBI-ProteinID:
XP_052396656
LinkDB
All DBs
Position
A23:complement(17362643..17380809)
Genome browser
AA seq
1342 aa
AA seq
DB search
MEQLSPEEIRRRRLARLAGGQTSQPSTPLTSPQRETPPGFLPGPSGASSQPVPPAPAHTL
GLNAQNVTPATSPMGASGVACRSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDIDTASC
EKSMSQVDVDSGIENMEVEDSDRREKRNLAEKDSSSSSDVSEEQALHLICKILRVSWKEQ
DRDVIFLPSLAAEFQKNPRDVYSDFRDLIGQILMEALMMSTRSRDCNPFASLTATSQPIT
AARSPDRHLTLVPPSSQSGSPMMPCAGSFGASSLSSLYGCSPNPLALSSARMSAPSVPLA
PAAAHPGPPSPPASRPPASLLLPSPSTPLPISQRYRPYSLSSSIPISPSQRASQSGMLTP
PTTSGIPSSPSPRHHSTDSSMPYPGSPSTVPRRTRLATRMPSSPFSLFFGLSDLPQDSSD
EEPEEEEDEDFSGVPFGSSLGASGGGMAGDSCSDRFTIESCKETEMLNYLIERFDSVGME
ERKALKMCSQPAVSQLLSNIRSQCISHAALVLQGTLTQPRAPLQPSLLVPYMLCRNLPYG
FIQELVRMTHQEEDVFKQIFVPILQGLTLAVKECSFDSDNFKFPLMALVELCEIKFGKTH
PVCNLITSLPLWCPDPLSPGTGREIQRLSFLGAFFSLSVFAEDDTKVGDKFFSGPAITVE
NTRVVSQSLQHYLESARGDLFKILHNILLNGETREAALSYMAALVNRNVKKAQIQTDDKL
VSTDGFMMNFLWVLQQLSMKIKLDTVDPLYIFHPKCRLNVSTEETRLKATMEDLKSWLTE
LHEDPSKFSEPKFPTECFFLTLHAHHLSILPCCRRYIRRLRAIRDLNRTVEELKNSENQW
KDSPLASRHREMLKRCKTQLKKLVRSKACADAGLLDENLLRRCLQFFSMVIQLILRMVEP
DYPGVTLPLNPEIPKSFAALPEFYIEDVAEFLLFIVQYFPQVLYEPCTGDIVTFLVVFIS
SQNYIKNPYLIAKLVEVLFVTNPAVQPRTQRFFEMMENHPLSINQLVPALMKFYTDVEHT
GATSEFYDKFTIRYHISTIFKSLWQNINHQGTFLEEFNSGKQFVRYINMLINDTTFLLDE
SLESLKRIHEIQEEMKNKEQWDQLPREQQQSRQSQLTQDERVSRSYLALATETVDMFHIL
TKQVQKPFLRPELGPRLAAMLNYNLQQLCGPKCRDLKVENPEKYGFEPKKLLDQLTDIYL
QLDCARFAKAIADDQRSYSRELFEEVISKMRKAGIKSTIAIEKFKLLLEKVEEIVARNSQ
SEMDYGDAPDEFKDPLMDTLMTDPVQLPSGNIMDRSIILRHLLNSPTDPFNRQPLTESML
EPVPELKERIQAWMRGKQSGRA
NT seq
4029 nt
NT seq
+upstream
nt +downstream
nt
atggagcagctcagtcctgaagagatccgtagaaggcgactggcccggttagctggaggg
cagacgtcacaacccagcacccctttgacatctccacagagagaaactcccccaggattc
ttgccagggccctccggggcctcgtcacagcctgtcccaccagctccagctcacactttg
ggcttaaatgcccaaaatgtcacccctgccacctctcctatgggggcctcgggggttgct
tgccgcagccagagcagcgagggggtcagctctctctccagctctccatccaacagtctg
gagacacagtcccaatccctgtcccgctcccagagcatggacattgacacagcctcctgc
gagaagagcatgtcccaagtagatgtggactcaggaattgagaatatggaggtggaagac
agcgatcgcagagagaaaaggaacctggctgaaaaggattcctcatccagttctgacgtc
tctgaagagcaggctttgcaccttatctgtaagatcttgcgtgtttcctggaaggagcag
gaccgtgatgtcatcttcctcccctcacttgctgctgaattccagaagaaccctagggat
gtttactctgacttcagagacctgattggacagattttaatggaggctctcatgatgtcc
acccgttcgcgtgactgtaacccattcgccagcttgactgccacatctcagccaatcact
gctgccaggtccccggaccgtcacctgactctcgtcccaccctccagccagagcggcagt
cccatgatgccctgcgctggttcattcggtgccagctctctttccagtctttacggttgt
agcccaaacccactcgctctgagctctgccagaatgagtgctccatctgtcccgctggct
cctgcggccgcccacccgggtccccccagtcctcccgcctctcgccctcccgccagcctt
ctacttccctctccatccacccctctgcccatctcccagagatacaggccctactccctt
agctcgtccatccccataagcccaagccaaagagcttctcaatctggtatgcttacgccc
cctacaacttcaggtataccctccagcccttccccaagacaccatagcaccgactcctcc
atgccttaccccggctcccccagcactgtgcccagaaggactaggctagccacccggatg
ccgtctagccctttctccctctttttcggcctgtccgacttgcctcaggacagcagtgat
gaagagccggaggaagaggaagatgaggatttttcaggggttccgtttgggtccagcctg
ggtgcgtccggaggggggatggctggtgactcatgtagcgaccgctttaccatagagtcc
tgtaaagagacggagatgctcaactacctcatcgagcgttttgacagtgtgggaatggaa
gagaggaaggccctgaagatgtgcagccagccagcagtcagtcagctgcttagcaacatt
cgttcccagtgcatttcccatgctgcactagtgcttcaaggtaccctcacacagcccagg
gcccctctacagccctcgctgctggttccctacatgctgtgccggaaccttccgtacggc
ttcatccaggagttggtgcgcatgactcatcaggaggaggatgtgtttaaacagatcttc
gttcccattcttcaagggctcactttagctgtgaaagaatgttcttttgacagtgacaac
ttcaagttccctctaatggctttggttgagctctgtgaaatcaagtttgggaagactcac
cctgtatgcaatttgatcacctctctgccattgtggtgtcctgaccctctcagtcccggg
acaggaagagaaattcaaagactctcctttctcggcgcattcttcagtctttctgtgttt
gctgaggatgatactaaagtgggagacaagttcttctcgggccctgccatcactgtggag
aacacccgtgtggtcagccagtcactgcagcattatctggagtctgcgaggggagatctg
tttaaaatcctgcacaatatcttgttgaacggagagacaagggaagcagctctgagctac
atggcagctctggtgaatcgtaatgtgaagaaggctcaaatccagaccgatgataagctg
gtgtccacagacggcttcatgatgaacttcctgtgggtgctgcagcagctcagtatgaag
atcaagctggacacagtggatcctctctacatcttccaccccaagtgtcggctgaatgtc
agcacggaagagacccggctcaaagccacgatggaggacctgaagagctggctcactgag
ctgcatgaagacccatccaagttctccgagcccaagttccctacagagtgcttcttctta
acgctacacgcacatcatctgtccatcctcccgtgctgtcgacgctacatacggaggctg
agggccatcagggatctaaacagaactgtggaagagctgaaaaacagcgagaaccagtgg
aaggattccccgttggcaagtcgtcatcgggagatgctgaagagatgtaaaacacagctg
aagaaactggtgcgctctaaagcctgcgcagacgcagggctgctggacgagaacctgctg
cgcagatgtctgcagttcttcagtatggtcatccagctcatcttgcgtatggtggaacct
gactacccaggcgtaaccctgcctctgaacccagaaatccctaaaagctttgcagcactg
ccagagttttacattgaagatgtggccgagttcttgctatttattgtgcagtactttcca
caggttctgtatgagccatgcactggtgacattgtgaccttcctggtggtcttcattagc
agtcagaattacataaagaacccatacttgatcgccaagctggtggaggtgctgtttgtc
accaatcctgcagtgcagccgcgcactcagcgattctttgagatgatggagaaccaccca
ctgtctataaatcagcttgtgccggctctcatgaagttttacaccgatgtggagcacact
ggagccacaagcgagttctatgacaagttcaccatccgttaccacatcagcaccatattc
aaaagcctatggcaaaacattaaccaccaaggcaccttcctggaggagttcaactctggc
aaacagtttgtgcgctacatcaacatgctaattaatgatacaacttttctgctggacgag
agtttggagtctctgaaacgcatccatgagatccaggaggagatgaagaataaagagcaa
tgggaccagctgcccagggagcagcagcagagccgccagtcccagctgactcaggatgag
agagtatcacgatcgtacctggctttggccacagagaccgtggatatgttccatatcctc
accaaacaggtccagaagcccttcctcaggcctgaactgggtcctcgtctggctgccatg
ttgaattataacctgcagcagctgtgtgggcctaaatgtcgagacttgaaggtggaaaac
ccagaaaaatatggttttgagccaaagaagctcctggatcagctgactgacatttatctg
cagctggactgtgctcggtttgccaaagccattgcagatgaccagcggtcatacagcagg
gagctgtttgaggaggtcatttcaaaaatgagaaaagcgggcataaaatccaccattgct
attgagaaattcaagcttctgttggaaaaggtggaggagatagtagcccgcaattctcag
tctgagatggattacggcgatgccccggatgagtttaaagacccgctgatggacactctc
atgactgatcccgtgcaactcccgtctggcaacatcatggatcgatccatcattctgcgt
cacctcctgaactctcccacagaccccttcaacagacagcctctcaccgagagcatgctg
gaaccagtcccagagctgaaggagcgcatccaggcctggatgagagggaagcagagtggc
cgtgcttga
DBGET
integrated database retrieval system
