Carassius gibelio (silver crucian carp): 127944704
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Entry
127944704 CDS
T08819
Name
(RefSeq) serine/arginine-rich splicing factor 6-like
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03040
Spliceosome
cgib05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127944704
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cgib03041
]
127944704
Spliceosome [BR:
cgib03041
]
Common components
Common spliceosomal components
SR proteins
127944704
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
Motif
Other DBs
NCBI-GeneID:
127944704
NCBI-ProteinID:
XP_052396856
LinkDB
All DBs
Position
A23:3590670..3598317
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AA seq
378 aa
AA seq
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MPRVYIGRLSYHVRDKDIQRFFSGYGKLLEVDLKNGYGFVEFEETRDADDAVYELNGKEL
CGERVMVEHARGPRRDRDSYGGGGYHGGGGGGRGEGGGGRSSGYSSRSRPGRNKYGPPVR
TEYRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERANEGVIEFGSYSDMRRAVDKLD
GTDINGRKIRLVEDKQRRRRSYSGSRSRSRSRRRSRSRSRRSSRSRSNSRSRSRSRSRRH
RSRSRSGHGSRSKSPSSKSRSRNRKSRSRSRTRKSRSRSTSRKSRSRSDERKSRSKSTSK
VKSDRERSKEKSVSKKSRSRSASPMENGDGVRAKSASRSPSPQAEKSQYKSPDRHSRSRS
KSGSRSKSRSRSRSASQD
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgagtttacatcggccggctgagctatcatgtccgtgataaagacatccagagg
ttcttcagcggctacgggaagctgctggaggtggatctgaagaacgggtacggctttgtt
gagtttgaggaaacccgtgatgctgatgatgccgtgtatgagctgaacggtaaagagctg
tgtggggagcgggtgatggtggagcacgcccggggtccacgccgggaccgagacagctac
ggaggagggggttatcacggaggaggaggcggtggcagaggcgaaggaggaggaggacgc
agtagtggttacagcagcagaagtcgccctggaaggaataagtatggccctcccgttcgc
actgagtaccgtctcattgtggagaatctgtctagccgttgcagttggcaagacctcaag
gatttcatgcgacaggcaggtgaggtgacctacgcagatgcccataaggagcgtgccaat
gagggtgtgattgagttcggctcctactctgacatgcggagagctgtggataaactggat
ggaacagacatcaatggcaggaagattcgtctggttgaagacaagcagcgccgtcgtcgc
tcctactctggcagccgctctcgttctcgtagccggcgtcgttctcgtagtaggagtcgc
cgtagcagccgttctcggagcaactcaagatctcgctctaggtctcgctctcgccggcac
cgctcccgttccaggtcaggacacgggtctcgctccaaatctccatcgagcaagtctcgc
tcacgcaaccgtaaatcccgttctcgctcccgaacacgcaaatcgcgcagtcgatcaacc
agtcgcaagtctcgctcccgctcagacgagcgcaagtcccgctctaagagcacttctaaa
gtgaagtcagatcgtgaacgctccaaggagaaatcagtcagcaagaaatctaggagtaga
tcggcttcaccgatggagaatggcgatggggttcgtgccaagtctgcttctcgctctcca
tcacctcaggctgaaaagagccaatacaagtctccagacaggcattcacgctctcgctca
aagtctggctcgcgctctaaatcccgttctcgttccagatctgcctcccaagattag
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