Carassius gibelio (silver crucian carp): 127944796
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Entry
127944796 CDS
T08819
Name
(RefSeq) retinoic acid receptor gamma-A isoform X1
KO
K08529
retinoic acid receptor gamma
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgib03000
]
127944796
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cgib03310
]
127944796
Transcription factors [BR:
cgib03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
127944796
Nuclear receptors [BR:
cgib03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
127944796
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
RNF111_N
Motif
Other DBs
NCBI-GeneID:
127944796
NCBI-ProteinID:
XP_052397021
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All DBs
Position
A23:complement(22662124..22713264)
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AA seq
506 aa
AA seq
DB search
MATNRERQVGHMTGFPPAVYPFAFNSMRSHSHFDLLTNSSLFGRFGADLPKEMAALSVET
QSTSSEEMVPSSPSPPPPPRVYKPCFVCQDKSSGYHYGVSSCEGCKGFFRRSIQKNMVYT
CHRDKNCQINKVTRNRCQYCRLQKCFEVGMSKEAVRNDRNKKKKDVKDEVVPPESYELSG
ELEELVNKVSKAHQETFPSLCQLGKYTTNSSSDHRVQLDLGLWDKFSELSTKCIIKIVEF
AKRLPGFTTLTIADQITLLKSACLDILMLRICTRYTPEQDTMTFSDGLTLNRTQMHNAGF
GPLTDLVFAFAGQLLPLEMDDTETGLLSAICLICGDRMDLEEPERVDRLQEPLLEALKIY
ARRRRPNKPHMFPRMLMKITDLRGISTKGAERAITLKMEIPGPMPPLIREMLENPEAFED
QSESTEKKPELEQPAPPPALLTMKKEQEDEDDSWATENGSEPSPEEEYDDDDDGEEERGT
DSDSEAWAGQEPNVDVSRKSHGGRAQ
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccaaccgggaacggcaggtgggtcacatgaccggcttcccacctgctgtttac
ccctttgccttcaattccatgcggagccactcccactttgacctgctgaccaatagcagc
ctgtttggacggtttggggcggaccttcccaaagagatggcagcattgtcggtcgagacc
cagagcaccagttcagaggagatggtgcccagctccccttctcccccacctccaccgcgc
gtttacaagccctgcttcgtctgccaggacaagtcttccgggtaccactatggtgtcagt
tcttgcgagggctgcaagggtttcttccgtcgcagtattcagaagaacatggtgtacacc
tgccaccgtgacaagaactgccagatcaacaaggtcacacgcaaccgttgccagtactgc
cggctgcagaagtgctttgaggttggcatgtccaaggaagctgtgcgcaatgatcggaat
aagaagaagaaggacgtgaaggatgaggttgttccgccagagagctacgagctgagtggg
gaactggaggagctggtcaacaaagtgagcaaagcacatcaagagaccttcccttcactc
tgccagctgggaaaatacaccacaaactcaagctcagaccacagggttcagctggatctg
ggcctatgggacaaattcagcgagctttccaccaagtgcatcattaaaattgtggaattt
gccaaacgccttccgggcttcaccactctcaccatcgcagatcagatcaccctccttaaa
tcagcctgcttggacattctaatgctgcgaatctgcacacgatacacaccggaacaggac
acaatgaccttttcagatggattgaccctcaaccggactcagatgcataatgctggcttc
ggcccgctcactgacctggtgtttgcctttgctggtcagcttctgccccttgagatggat
gatacagagactggcctcctcagcgccatctgcctcatttgtggagaccgaatggatctt
gaggagcctgagcgtgtagatcgtctgcaagagcccctgctggaagctctgaagatctat
gctcgccgccgccgacccaacaaacctcatatgttccctcgcatgttgatgaaaatcact
gacctgcgtggcatcagcaccaagggagcagaaagggccataactctcaagatggagatc
ccaggccccatgcctcctctcatccgagagatgctggaaaacccagaggccttcgaggat
cagtccgagtccacagagaagaagcccgagctcgaacagcccgctcctccacccgccctc
cttactatgaagaaagagcaggaggatgaggacgacagctgggccacagagaatggcagt
gagccttcaccggaggaggagtacgacgatgacgatgacggagaagaggagaggggtaca
gacagcgacagcgaggcctgggccggccaggaacccaatgtggacgtgtccagaaagagc
catggaggaagagctcagtga
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