KEGG   Carassius gibelio (silver crucian carp): 127944818
Entry
127944818         CDS       T08819                                 
Name
(RefSeq) collagen alpha-3(IX) chain-like
  KO
K08131  collagen type IX alpha
Organism
cgib  Carassius gibelio (silver crucian carp)
Pathway
cgib04510  Focal adhesion
cgib04512  ECM-receptor interaction
cgib04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:cgib00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    127944818
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    127944818
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    127944818
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:cgib00535]
    127944818
Proteoglycans [BR:cgib00535]
 Extracellular matrix (ECM) proteoglycans
  Others
   127944818
SSDB
Motif
Pfam: Collagen
Other DBs
NCBI-GeneID: 127944818
NCBI-ProteinID: XP_052397084
LinkDB
Position
A23:1313103..1341354
AA seq 679 aa
MAVFSALHLLFLFQLLTASLAQIRPGPRGAPGAPGPLGPPGKDGIDGKPGPAGLPGKPGP
KGKAGKSGAAGSPGLPGLPGVDGLTGPDGPAGKDGPSGAAGDPGPPGPDGPPGRGRPGAL
GLAGANGLPGGPGPKGPPGPEGLPGLPGLPGPDGPPGLPGTLPEGSGDLLCPAICPPGPP
GPPGMPGFKGHTGHKGSKGEVGKDGEKGDQGPPGPSGMPGTVGLQGSRGLRGLQGPVGAV
GDRGLPGFRGKPGITGIIGKTGDVGERGPQGFRGPKGEIGKIGAKGLPGGVGPKGEPGIP
GRDGKDGTQGLDGEKGDAGRPGVAGEKGPNGLPGLPGKAGAKGAKGGVGSPGEMGEAGPS
GEPGIPGEIGIPGERGEAGPRGVAGGVGLVGNPGAQGVKGFQGVKGALGDPGLPGPTGIR
GGFGERGPVGAGGPKGDMGVAGSDGLPGENGEPGPYGPVGQKGESGKRGELGAKGVVGPQ
GETGSRGAPGKPGPMGFQGEQGFPGVAGKTGVPGKLASEQHIRELCGSMIDDQIAQLAAN
LRRPLAPGAVGRPGPPGPPGKQGEVGSIGHPGSLGPPGYRGLPGDLGDPGPRGDVGEPGD
KGPVGKAIEGPTGDQGDPGLPGVHGIVKDGRDGAPGDPGEAGEAGRAGRPGHQGSPGICD
TSACQGAVVHGKSSNPKNH
NT seq 2040 nt   +upstreamnt  +downstreamnt
atggccgtgttctcagcgcttcatctgctctttctgttccagctactgacagcgtctctc
gcgcagataaggccgggtcctcggggtgcacctggagcgccagggccgctgggaccccca
gggaaagatggcatcgacggtaaacctggcccggccggacttcctggaaagcctgggccg
aaaggtaaagcaggtaaatctggggccgcaggaagcccgggactgcctggactccctggt
gtggatggtttaaccggtccggacggtccagctggcaaggatggaccatcaggagcagca
ggtgacccaggaccccccggaccggatggaccccctggcagaggcagaccaggagctctg
ggtcttgctggagctaatggacttccaggtggaccaggacctaagggtccgccggggccc
gagggtcttccaggactccctggtcttccaggcccggatggacctcctggacttccagga
actcttcctgaaggcagtggtgatctgctgtgtccggccatctgtcctccgggtcctcct
ggaccgccgggaatgcctggattcaagggtcacacaggtcacaaagggagtaagggagag
gtggggaaagatggagagaagggtgatcagggcccgccggggccgtcggggatgccaggg
acagtgggtttacagggctctcgagggctgagaggactccaggggccagtgggagcagta
ggagacagaggattgcctggcttcagaggaaaacctggaatcactggcatcattggaaaa
actggtgatgttggtgagagaggaccgcaaggtttcagagggcccaaaggagagataggg
aaaataggcgccaagggactccctggaggcgtaggacctaaaggagaaccgggcatcccg
ggcagggacgggaaggatggcacccaagggctggatggtgaaaagggagatgctgggaga
cctggagtagctggtgagaaaggacctaacggcctgcctggtttgccaggaaaagctggt
gccaaaggtgccaaaggaggagttggcagtccaggagagatgggagaagcaggaccgtct
ggagagccaggtatacctggtgagattggcatccctggagagagaggagaggctggaccc
agaggtgtagctggtggtgttggactagttggaaaccctggagcgcaaggtgttaaagga
ttccagggtgttaaaggagctttaggtgatccaggtctgcctggtcctactggaatcaga
ggaggctttggtgagcggggtccagttggagctggaggtcctaaaggagacatgggagtt
gctggaagtgatggtttaccgggggagaacggggagcccggtccttatggtcctgttgga
cagaaaggagagtccggtaagcgtggtgagcttggagccaaaggagttgtaggaccacag
ggagagaccggatccaggggggcacctggaaaaccaggaccgatgggattccaaggagag
caaggctttccaggggttgctggaaagactggtgttcctggcaaactggctagtgagcag
cacatcagagaactgtgtggctccatgattgatgatcagatagctcagctcgctgctaac
ctgagaagacctctggctcctggtgctgtgggacggcctggaccaccggggcctccagga
aaacaaggggaagttggatccattggtcaccctggatccctcggcccaccaggttataga
ggactgccaggagatctcggtgatcctggtcctcgaggagatgttggtgaaccaggtgat
aaggggcctgttggtaaagcaatcgaagggcccactggagaccagggtgacccgggtctg
cccggcgtgcatggcatcgtcaaagacggccgtgacggagcacctggagatccaggagaa
gcaggagaagcaggacgagccggcagaccgggacaccagggatcacctggaatctgtgac
acatcagcgtgccaaggagcagtggttcacgggaagtcctccaaccctaagaaccattaa

DBGET integrated database retrieval system