KEGG   Carassius gibelio (silver crucian carp): 127944875
Entry
127944875         CDS       T08819                                 
Name
(RefSeq) THO complex subunit 4-like
  KO
K12881  THO complex subunit 4
Organism
cgib  Carassius gibelio (silver crucian carp)
Pathway
cgib03013  Nucleocytoplasmic transport
cgib03015  mRNA surveillance pathway
cgib03040  Spliceosome
cgib05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:cgib00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    127944875
  09122 Translation
   03013 Nucleocytoplasmic transport
    127944875
   03015 mRNA surveillance pathway
    127944875
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    127944875
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cgib03019]
    127944875
   03041 Spliceosome [BR:cgib03041]
    127944875
Messenger RNA biogenesis [BR:cgib03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     127944875
    TREX complex
     127944875
Spliceosome [BR:cgib03041]
 Complex C
  Other components
   EJC/TREX
    127944875
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    127944875
SSDB
Motif
Pfam: RRM_1 FoP_duplication
Other DBs
NCBI-GeneID: 127944875
NCBI-ProteinID: XP_052397215
LinkDB
Position
A3:7035890..7039064
AA seq 280 aa
MADKMDMSLDDIIKQNRQRGGGGRGGRGGRGGRGGSGGGRGAGAGGRLGNTGGGFGGRGG
GSGPMRNRQNLSRGRSRPTPYSRPKQLPDKWQHDLFDNGFSTNASSGGGGGGGGAGGVET
GGKLLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMK
QYNGVPLDGRPMNIQLVTSQIDAQRRPPMQGLNRGGGGMNRNRLGGFAVQKGRGGRGGGG
GGGGVRGRGRGGRGGGSKQQLSAEELDAQLDAYNAKMDTS
NT seq 843 nt   +upstreamnt  +downstreamnt
atggcagacaagatggatatgtctttagacgacatcatcaagcagaaccggcagcgcggt
ggaggcggacgcggcgggagaggaggccgcggtgggcgcggaggctcgggcggaggccgc
ggtgctggcgccggggggcggctcggaaacacaggcggaggcttcggaggccgcggcgga
ggatcgggccccatgaggaaccggcagaacctgagccgcgggagaagcagacccacgccg
tacagcaggcccaagcagctcccagacaagtggcagcatgacctgttcgacaacggcttc
agtacgaacgccagcagcggaggaggaggcggcggcggtggagcgggtggcgtggaaacc
ggaggaaagctactcgtgtccaatctggactttggtgtgtccgacgcagacattcaggaa
ctcttcgcagaatttggcactttgaagaaagcagcagtgcattacgacaggtccggacgc
agcctcggcactgcagatgttcacttcgagaggaaagcagacgccctgaaagccatgaag
cagtacaacggtgttcccctcgatggtcgcccaatgaacattcagcttgttacatcacag
attgacgcgcagcggcggcctccgatgcagggtctgaatcgcggcggtggtggcatgaac
agaaacagactcggaggctttgctgtgcagaaaggtcgcgggggacgtggtggtggtggt
ggtggaggaggggtcagaggtcgggggcgaggcggtcgaggcggcggcagcaaacagcag
ctctctgctgaagaactggacgcccagctagacgcatacaacgccaaaatggataccagc
taa

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