Carassius gibelio (silver crucian carp): 127945836
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Entry
127945836 CDS
T08819
Name
(RefSeq) leucine-rich repeat-containing protein 4B-like isoform X1
KO
K16360
netrin-G3 ligand
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04514
Cell adhesion molecule (CAM) interaction
cgib04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
127945836
04517 IgSF CAM signaling
127945836
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cgib04515
]
127945836
Cell adhesion molecules [BR:
cgib04515
]
Immunoglobulin superfamily
NGL family
127945836
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
ig
LRR_9
V-set
LRR_14
Ig_2
LRRNT
VEGFR1-3_N_Ig-like
Ig_6
MASE2
Motif
Other DBs
NCBI-GeneID:
127945836
NCBI-ProteinID:
XP_052397887
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Position
A24
Genome browser
AA seq
747 aa
AA seq
DB search
MPRDTRFHKLIVKKKGAGHDSVAMQAAMVTGLFSPSLLIWLVQLLLWPHLLGPRLAEASP
ACPSPCSCSNQASRVICTRKSLNEVPQSISSNTRYLNLQENSIQVIRSDTFKHLNHLEIL
QLSKNQIRLIEVGAFNGLPNLITLELFDNRLPLVPSQAFEYLSKLRELWLRNNPIETLPA
YAFHRVPSLRRLDLGELRKLSFISEAAFEGLLNLRFLNLGMCGLKDVPNLTPLVRLEELE
LSGNQLDVVRPGSFQGLVSLRKLWLMHSRIAVIERNAFDDLKNLEELNLSHNSLHSLPHD
LFTPLQQLERVHLNHNPWVCNCDVLWLSWWLKETVPDNSTCCARCHAPPGTKGRYIGDLE
QRDFTCYAPVIVEPPTDLNVTEGMAAELKCRSGTSMTSVNWLTPNGTLMTHGAYKVRISV
LHDGTLNFTNVTMQDTGPYTCMVTNSAGNTTATAVLNVSASDPGNGYSYFTTVTVETVES
GQDVHDSARQFVNETFISFPGPTAASASAGPTGSMLSSLSPRATRAPDHSFTVSITDIAN
LSGLEDVMKTTKIIIGCFVAITFMAAVMLVVFYKLRKQHQLHKHHGPARAIEIINVEDEI
GSAGGASGITGGSTIHAGAGSGGGSRQSPRNHDAEILTLPSVGQADHLNHYYKTHHFNNN
VLGLNMASGMLNNKPNPSSQNQASTMKMGTSSDPSNPGSISPPLPIPIPMATTFHGTFKC
LNHVPNLQTEPLLLSNGSKESVQETQI
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgccacgagatacccgattccacaagttaatcgtaaaaaagaaaggggcaggacatgac
tcagttgccatgcaggctgctatggtaacaggccttttcagcccctccctcctcatctgg
ttggtccaactgttgttgtggccacacctcctcggccctagattggctgaagccagtccc
gcctgcccttctccctgtagctgttccaatcaagccagtcgagtgatctgtaccagaaaa
agcttgaatgaagttccacagagtatctcgtctaatacccgatacctcaacctccaggag
aactccatacaggtgatcaggtcagacaccttcaagcatctaaatcatctggaaatttta
cagttgtctaagaaccagattcgtctgatagaagtgggagctttcaatggccttcccaat
cttatcaccctggaactttttgacaatagattgccactggtaccatcacaggcgtttgag
tacctgagcaagctgcgtgaactctggctaaggaacaaccctatagagacactcccggcg
tatgcctttcaccgtgtgccatcgctgcgacggttagacctcggagagctgcgcaaactc
agtttcatctcagaggctgcattcgaggggttgctgaatctacggttcctgaatctgggc
atgtgcgggcttaaggatgtacccaacttgacgcctctcgtacggctagaggaactggag
ctgtcaggaaaccaactagatgtggtgcgtcctggatctttccaaggcctcgtgtctctt
cgcaaactgtggctcatgcactctcggatcgccgtcattgagaggaatgcatttgatgac
ctcaagaacctggaggagctcaatctgtcccataactctcttcattcgttgccccatgat
ctcttcactccactgcagcagttagaacgtgtccatctgaaccacaacccttgggtttgc
aactgtgacgttctgtggttgagctggtggcttaaagaaaccgttcctgataactccact
tgttgtgcacgttgccatgccccaccaggtactaagggcagatacattggtgacctcgag
cagcgagacttcacctgctatgcacctgtgattgtggagccacccactgatctgaatgtg
acagagggaatggcagcggagctgaaatgccgctctgggacatccatgacttctgttaat
tggttgacccccaatggaaccttgatgacccatggagcctacaaggtccggatctcggtc
ctgcatgatggaaccctgaatttcaccaacgtgaccatgcaagacacaggaccgtacacc
tgtatggtcaccaactcagctggcaacaccacagcaactgctgtgttgaacgtctctgca
tctgacccaggcaatggctacagctacttcacaactgttacagttgaaactgtggagtct
gggcaagatgtccacgattcagcacggcagttcgtcaatgagacgttcattagttttcca
gggccgacggctgcatctgcatcagcaggtcccactggttcaatgctgtcctccttgtca
ccacgagctacacgtgcacccgatcattctttcacggtctccatcacagacatcgccaac
ctgtcgggtcttgaggacgtaatgaagacaaccaagatcatcatcggctgctttgtggcc
atcaccttcatggcggctgtgatgctggttgtcttctacaagcttcgcaagcagcaccaa
ctgcacaaacaccatggcccggcacgcgccattgagatcatcaacgtcgaagatgagatc
ggatctgccggtggggctagtggcatcacgggagggagcaccatccacgcaggtgcagga
tctggtggaggaagcaggcagagtccgaggaatcatgacgctgagatcttgaccttaccg
agcgttgggcaagctgaccacctgaaccactactacaaaacacaccactttaacaacaac
gtactgggcttgaacatggcttccggaatgctcaacaacaaacccaacccttcttcccaa
aatcaggcttcgaccatgaaaatggggacttccagtgacccttcaaaccctggctcgatc
tcacctcctctaccaattcccatcccaatggcgactactttccatggaacttttaaatgc
cttaatcacgttcccaatttgcagactgagccgctgttgctatcgaatggctccaaggag
agtgttcaggaaacccagatatga
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