Carassius gibelio (silver crucian carp): 127945973
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Entry
127945973 CDS
T08819
Name
(RefSeq) laminin subunit alpha-1 isoform X1
KO
K05637
laminin, alpha 1/2
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04510
Focal adhesion
cgib04512
ECM-receptor interaction
cgib04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
127945973
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
127945973
09142 Cell motility
04820 Cytoskeleton in muscle cells
127945973
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_1
Laminin_G_2
Laminin_EGF
Laminin_B
Laminin_N
Laminin_II
Laminin_I
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
127945973
NCBI-ProteinID:
XP_052398151
LinkDB
All DBs
Position
A24:complement(526842..563583)
Genome browser
AA seq
3081 aa
AA seq
DB search
MKRRRMKMLWPFAVILSSLVCVETQQRGLFPAILNLASNAEITTNATCGDPLPEMFCKLV
EHVPGRRIRNPQCRICDANSQNPKEQHPISYAIDGTNLWWQSPSIKNGPQFHWVTVTLDL
RQVFQVAYIIIKAANSPRPGNWILERSLDGVDFQPWQYYAISDTECLTRYNITPRLGPPT
YKRDDEVICTSYYSRLVPLEHGEIHTSLINGRPSADDLTPELLEFTSARFIRLRLQRIRT
LNADLMTLSYRDPKEVDPIVTRRYYYSIKDISVGGMCICYGHAQSCPWDPVTKKLQCVCE
HNTCGESCNECCPGYHQEPWQPGTLSDGNTCEKCNCHNKAEDCYYNQTVADLRLSLNTHG
RREGGGVCVNCSQNTAGVNCQTCADGYYRPHQVSPYDDDPCVECQCDTRGSASPVCIRDD
DQSIPGAGLSAGQCLCKEGFAGDKCDRCAFGFRDFPQCTRCECNLAGSHNVDPCSECVCK
VNVMGSNCDLCKQGFYNLQASNPEGCTECFCFGVSDVCESSTWFSSSVEHRDGVLLRSLQ
SSSVFTSTVSDNNLIVSNLSASAGVRSVWSWAAPESFLNNKLTSYGSFLNYSVAYDTSEE
NVDRTLQAHFSVIIEGNGRTLRQAESAHLLLNAHTEQHVSLLMLPHTLTDARSGSRVQRD
ELMTVLADVAALRVRVQLEDSVEGTLRLSSVSLGVGDTNSGLSKIPLDVEQCECPWGYSG
TSCEYCMSGFYRVGGILFGGNCLQCECNDHTAECDISGECLGCAHNTTGPHCDQCMLGFY
GDASEGTPDDCQRCACPLTLESNNFSPTCVLQRPGEFTCDQCMLGYAGAKCERCAEGYYG
DPSEPGRRCVACECNGNVDPAEAGHCDGRTGECLKCLGHTGGQHCERCADGFYGDAVTLK
NCQACGCHGNGSLSTVCHVITGQCECKANVIGQTCDCCQAGYYGISSSAGCRLCECNQSG
ALSASCDEEGRCQCITGVTGDKCDVCERGYYSFTESGCTPCDCAHTHGNCHADTGECICP
PHTLGLKCEECEEGHWGHDGVSGCKACDCSAAGSSSSQCDLWSGQCRCRPHFSGLRCDRC
AFGYKNFPECTACGCSPDGTREEFCDPELGVCGCQDHGRCDCKENVGGGGCDECKSGTFG
LSAQNPSGCSLCFCSGVSSVCEELGGLVRVPVRLGSAPALLRVVSQSDLQGTLEGVSYSD
QEMLLDASHLHRLSVLSGPYYWRLPHKYHGSQLLSYGGTLSFTVLFFALDGAGLANHEPQ
VLMRGGHLRRLVIYTELPAPENGVRTGQEVPLTEHKWKYFNSVSDEAVSHADFMSVLSNV
EYIIIKASYGSGLQQSRISNISLDTALEADEAPRGADVARLVETCECPPGYAGLSCQECA
PGFYRQAVSELNMKGRNRPLIRPCVACRCNNHSLSCDLDTGECLGCQHNTAGEHCHVCAA
GYYGKVQGSVSDCSMCACPLRGQSFSSTCVLEGAGDFRCDRCEEGYEGRYCERCSVGYYG
TPSEAGGRCQVCRCSGAGSVHSICDGRTGSCECKPGVRGHLCDQCEERHVLVSEQCVSCD
DGCTGALLDDLDALDGSIASLNLSGVILAPYSQLMTLENQTREVKQSLMSWEQSTGHQLT
TGEEHLNNLTDQITDLQQQVQSVFDGSEDVLLISEERFTQGKHLLDLINNIHSAIHGLVE
QVRSVKVTGSEDLDETNSSFLLEETRDTLENIRSINLTHCSSTAEDELRSAVSVLEKVQE
DMSKPLSLNIFRQENMSRSLSTHSQRLLQLQRALNTAEGHNNHSTQLLEHIRTKLQTLTI
SGNNVSSLNQEVEAQVQEAQDLLTDALDIAEDMSNSTTTLEETRNDLEAWSPSLRKHVDT
LVMDLTRRDALQLVYRAEDHARALSTQAQALNSSLSEVRSAAVNASSVSQTNTNIREHTQ
LAEELALAANQSASSALNLTSEPSLTEQRNTALQKSTEILDTSRSLKNQTEGLVFSIGVV
SRKLSLVGASVQNVTQLLPESLSILTNLPEGSRAEVLQVKQQTEAVNASVQEALRRLEDQ
RVKLDAASAAVTSANDSIRSTNQLLRDSELTAAEVRARLSEAQLKTERLFDRLEPLRTLG
EKLSSNLSDIRELIHQARQQAASIKVAVSADRDCVRAYRPEVTSSNFNTLTLTMKTSEPD
NLLFYMGSSSSEDFLALEMRHGKVSLLWDTGSGHTRLEYPSVQINNDRWHRINATRFGRH
GTLTVQQMDSEPLPTVRSTASGSSTVMDVSRSSWVFVGGLGAQVKKPPAVRTTHFRGCVS
EASLNENNIGLWNYAERRGECGGCFMSPRSEDTSFHFDGSGFSVLEKSLRSMSTSVVLFF
KTLSPNGLLLYLASNGTRDFLSIELVEGKVHLTFELGSGALTLTSNRTYNTGSWYRVALQ
RNKRRGHLSVMAADKPSEREVMEAESPGSSSDLNRSDLDPIYIGGLPASRPIRRQVVARS
FVGCMKNVEIARTNFDLLRESYGVKKGCVLKPVRSVSVFGGGFLQMPALLFAPHTEVMSS
FSSRRERGVILAGFSSPRHTQQSFLLVMLESGSLEVHVGVAGGGAVHRAVVKSQNGSFSD
GQEHSLILQRNKRSITVFVDEQNHAMVKLGSSADKPLALERLFIGGVPPGETGSRDSFYG
CIRNTAVDGMLLDLSSALRYEDVDMDSCLLEERPKRVLLPDELEAEPTSDPATRPLSPPE
ELSAFTPGSSSCAAADDTETIPESLQFGLNRHSHVIMGFKNKTVRTSFVVKLSVRTFARS
GVLFYMANANQQDYAVLQVQGGRLQLSCDLGKGPAHASLTTPISDGLWHTVKAEFSKKTV
MVSVDGIESDRTPTKGHTLDVEGKLYLGGLPATYTARRIGNVTHSLAACVQDVMFGGVQM
NLSAALSSHSAGVCFRRAQSGSFFSGSGYAAFMKEGYNVGSDLTVSLDFRSTAPDGVLLG
ISSTKVDAIGLELVNGQVVFNVNNGAGRITASSRSAVSMCDGRWRTLVAKKQKHSLSLTV
DGVTVTAENPYSSSTSAETKNPIYVGGYPADVKQNCLSSREAFRGCMRNLRVMKGHVTDV
LDFSAAFAHPHVSPHSCPTAA
NT seq
9246 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggaggaggatgaagatgctgtggccgtttgcagtgattttgtcctcactggtt
tgtgtggagactcagcagagaggtctgtttcctgctatcttgaacctcgccagcaatgcc
gaaatcaccacgaatgccacgtgtggcgacccgcttcccgagatgttctgtaaactggtg
gaacacgtccccggaagacgaatccgtaaccctcagtgtcggatctgtgatgcaaacagc
cagaatcccaaagagcaacatcccatttcttacgccatcgacggcaccaacctgtggtgg
cagagcccgagcatcaagaacggccctcagttccactgggtcaccgtcactctggactta
cgacaggtcttccaggtggcgtacatcatcatcaaagcggcgaactctccgcggcccggg
aactggatcctggagcgttctctggacggagtggacttccagccgtggcagtactacgcc
atcagtgacaccgagtgtctgacccgatacaacatcacgccccgcctcgggccgcccacc
tacaagagagacgacgaggtcatctgcacgtcctactactcacgcctggtgccgctggag
cacggcgagatccacacgtctctcataaacggccgtcccagcgcagatgatctgacccca
gagctgctggagttcacttctgctcgattcatccgcctgcgtctgcagaggatccgaaca
ctcaacgctgacctcatgaccctgagctaccgcgaccccaaagaagtggaccccatcgtc
acccggaggtattattactccatcaaggacatctcggtgggcgggatgtgtatctgttat
ggccacgcccagagctgcccctgggaccctgttaccaagaagctgcagtgtgtgtgtgaa
cacaacacttgtggagagagctgtaatgaatgttgccctggataccatcaggagccatgg
caacctggaacgctttccgatggaaacacatgcgagaaatgtaactgtcacaacaaagct
gaggactgttactacaaccagacggtggcagatctgcggctgagcctgaacacacacggc
cggcgcgagggaggaggagtgtgtgtgaactgctctcagaacacagcgggagtgaactgc
caaacctgtgcggacggatactacagaccacaccaggtgtctccgtacgatgatgacccg
tgtgtggagtgtcagtgtgacactagaggttctgcgagccccgtctgcatcagagacgat
gatcagtcgatccccggcgcaggtctctccgccggtcagtgtttgtgtaaggagggtttt
gcgggggacaagtgtgaccgctgtgcgttcggattcagggatttcccacaatgcactcgc
tgcgagtgtaacctggctggaagccacaacgtcgacccctgcagcgagtgtgtgtgcaag
gtgaatgtgatgggctctaactgtgatctgtgtaagcagggcttctataacctacaggcc
agtaatcctgagggctgcactgagtgcttctgtttcggagtctcagatgtgtgtgagagc
tccacctggttcagcagctctgtggagcacagagacggcgttctcctccgatctcttcag
agctctagcgtcttcacgtctaccgtctcagacaacaacctcatcgtctctaacctctcc
gcgtccgcaggagtccggtccgtgtggtcatgggccgcgcccgagtccttcctcaacaac
aagctaacatcgtatggaagtttcctgaactacagcgttgcttatgacacgtctgaggaa
aacgtggacagaacgcttcaagctcatttcagcgtaattattgagggtaacgggcgaacg
ctgcgtcaggctgagtccgctcatctgctgctgaacgctcacaccgagcagcacgtctca
ctcctgatgctgccgcacacactcacagacgctcgcagcgggagccgtgttcagagagac
gagctgatgacggtgctggcagatgtcgctgcgctcagggttcgagttcagctggaggac
agcgtcgagggaacactcaggttgagttcggtgtctttaggtgttggagacacaaactcg
ggtctctctaaaatccctctggatgtggagcagtgcgagtgtccgtggggttattcaggc
acttcctgtgagtactgtatgtctgggttctatcgggtcggtgggattctgttcggagga
aactgtcttcagtgcgagtgtaacgatcacacggcggagtgtgacatcagcggagagtgt
ctgggctgtgcgcacaacaccacggggcctcactgcgatcagtgcatgctgggtttctat
ggcgacgccagcgagggcacaccggatgactgccagagatgtgcctgtccactgacactg
gagtccaacaatttcagccccacgtgtgtgctgcagcgtcccggtgagttcacgtgtgat
cagtgcatgctgggatacgcaggagccaagtgtgagaggtgtgcggagggttattacggt
gacccctcggagccgggccggcggtgtgtggcgtgtgagtgtaacggtaacgtggatccg
gctgaagcgggtcactgcgacggacgcaccggggagtgtctgaagtgtttgggtcacacg
gggggtcagcactgcgagcgctgcgcagacggcttctacggagacgctgtgaccctcaaa
aactgccaggcttgcggttgtcatggtaacggctctctgtccaccgtgtgtcacgtgatc
accggtcagtgtgagtgtaaggccaacgtgatcggacagacctgtgactgctgtcaggcg
ggttattacggcatcagcagcagtgctggctgcagactgtgtgaatgtaaccaatcagga
gctctgtctgcgtcatgtgacgaggaggggcggtgccagtgcatcactggagtgacaggt
gataaatgtgatgtgtgtgagcgcggatactacagcttcaccgagagcggctgcacaccg
tgtgactgcgcacacacacacgggaactgccacgctgacacgggcgagtgtatctgtcct
ccacacacactcggtctgaagtgtgaggagtgtgaggaaggtcactggggtcacgacggt
gtgtccggctgtaaggcgtgtgactgcagtgctgcaggctccagttcgtctcagtgtgac
ctgtggtcaggtcagtgtcgctgcaggccgcacttctccggtctcaggtgcgaccgctgc
gctttcggctacaaaaacttcccagaatgcactgcatgcggctgcagccccgacggcacg
cgagaggagttctgcgaccccgagctgggagtgtgtggatgccaggatcacggccgctgc
gactgcaaggagaatgtcggcggcggcggctgtgacgagtgtaagagcgggacgttcggt
ctgagcgctcagaatccgtccggatgcagtctgtgcttctgttctggtgtgtccagcgtc
tgtgaggagctcggcggactggtccgtgtgccggtgaggctgggctctgctccggctctg
ctgcgtgtggtgtctcagagtgacctgcaggggacgctggagggcgtttcttacagcgat
caagagatgcttctggacgcctctcacctccaccgtctgtccgtcctcagcggcccgtat
tactggagactcccgcacaaataccacggtagccagctgctgtcgtacggaggaacactg
tccttcaccgtgttgttcttcgctctggacggcgcggggctggccaatcacgagcctcag
gtgctgatgaggggcggacacctgcgacggctggtcatctacaccgagctccctgcgcct
gagaacggcgtccgcaccggacaggaggttcctctgaccgagcacaagtggaagtatttc
aactctgtgtctgatgaagccgtgagtcacgcagacttcatgtcagtgctgagtaacgtg
gagtacatcatcatcaaagcatcgtacggctcaggactgcagcagagcaggatctctaat
atctctctggacacggctctggaggcggacgaggctcctcggggtgcagacgtggctcgg
ctggtggagacgtgtgagtgtccgccgggatacgctggactctcctgtcaggagtgtgct
ccggggttttaccgtcaggccgtgtctgagctcaacatgaagggcagaaaccgtccgctc
atccggccctgcgtggcctgccggtgcaacaaccacagcctgtcatgtgacctggacacg
ggcgagtgtctgggctgccagcacaacaccgcaggagagcactgccacgtgtgcgccgca
gggtattatgggaaggtgcagggctccgtcagcgactgctcgatgtgcgcctgtccactg
cggggtcagagtttcagctcgacgtgtgtgttagaaggagctggtgatttccgctgcgat
cgctgtgaggagggatacgagggccgttactgtgagaggtgttcggtgggttactatggc
accccgtcggaggcaggtgggcggtgccaggtgtgcaggtgcagtggggcggggtcagtg
cacagcatctgtgacggacgcaccgggagctgcgagtgtaagcccggggtcagaggtcat
ctgtgtgaccagtgcgaggagaggcatgtgctggtcagcgagcagtgtgtgtcgtgtgat
gacggctgcaccggggcgctgctggacgatctggacgctttagacgggtccatcgcctct
ctgaacctgtcaggggtcattctcgcaccctacagccagctgatgaccctcgagaaccag
accagagaggtcaagcagagtctgatgtcatgggagcagagcacaggtcatcagctgacc
acaggagaggaacatctgaacaacctgaccgatcagatcactgaccttcagcagcaggtc
cagagtgtgtttgatggcagtgaagatgtgctgctgatctcagaggagagattcacgcag
ggcaaacatctgctggacctcatcaacaacattcattctgccatccacggtctggtggag
caggtgcgctcagtgaaggtgacggggagcgaggatctggatgagacgaacagcagcttc
ctcctggaggagacgagagacacgctggagaacatcaggagcatcaatctgacacactgc
agctcgactgctgaagatgagctcaggtctgcagtgtctgtgctggagaaggttcaggag
gacatgtccaaacccttgagtctcaacatcttcagacaggagaacatgtccagatccctc
tccacacacagccagcggctcctgcagctccagagggccctaaacacagctgagggccac
aacaaccacagcacacagctgctggagcacatcaggaccaagctacagacgctcacaatc
tccgggaacaatgtgagcagtctgaaccaggaagtagaagcgcaggtacaggaagctcaa
gacctgctgaccgatgctctggacatcgctgaagacatgagcaacagcacgactactctg
gaggagaccaggaatgatctggaagcatggagtccatctctcaggaagcacgtggacact
ttagtgatggacttgaccagaagagacgccctacagctggtgtacagagccgaggatcac
gcacgagctctcagcacacaggctcaagctcttaacagttctctgtctgaggtcaggtct
gcagcagtgaacgccagcagtgtctctcagaccaacaccaacatcagagaacacacacag
ctggctgaagagctggccctcgcagccaatcagagcgctagctccgccctcaatctgacg
tctgagccctcgctgaccgagcagaggaacacagctcttcagaagagcacagagattctg
gacaccagcagatccctgaagaaccagacagaagggctggtgtttagcatcggtgtggtg
agcaggaagctgagtctggttggagcgagtgttcagaacgtcacacagctgctcccagaa
tccctgagcatcctcacaaacctcccggaaggcagcagagctgaagtcctgcaggtgaag
cagcagaccgaagcagtgaacgcatccgtacaggaagctctgcggcgtctggaggatcag
cgtgtgaagctggacgcggcgtctgcagcggtgacctcagctaacgacagcatcaggagc
actaaccagctgctccgagactccgagctgaccgccgccgaggtcagagccagactgagt
gaggctcagctgaagaccgagcgtctgttcgaccgtctggagcccctgaggacgctggga
gagaagctgagctcaaacctgtccgacatcagagagctgatccatcaggctcgccagcag
gcggcgtcgattaaagtggccgtttctgcggaccgggactgtgtgcgagcgtacagacca
gaggtgacgtccagtaacttcaacaccctcacgctgaccatgaagaccagcgaaccggac
aacctgctcttctacatgggcagcagctccagcgaggatttcctggctctggagatgcgt
catgggaaggtgtctctcctgtgggacaccggctctggacacaccagattagagtatccc
agcgttcagatcaacaacgacaggtggcacaggatcaatgcgacgcggttcgggagacac
gggacgctcaccgtccagcagatggactccgagccgctgcccacagtgaggtccacagcg
tccggctcctccacagtgatggacgtcagcagatccagctgggtgttcgtcgggggcctc
ggcgctcaggtgaagaaacccccggcggtgagaacgacacacttcagaggctgcgtgagc
gaagcgtcgctcaacgagaacaacatcggcctgtggaactacgctgagagacggggagag
tgcggcggctgcttcatgagtccgcgctctgaagacacctccttccacttcgacggcagc
ggtttctctgtgctggagaagtctctgcgctccatgtccaccagcgtggtcctgttcttc
aagactctgtctccgaacggccttctgctgtatctggcctccaacggcacgagagacttc
ctgtccatcgagctagtggaaggaaaggttcacctgacctttgaactgggctccggagcg
ctgaccttgacctccaacagaacgtacaacaccggcagctggtacagagtcgccctgcag
aggaacaagcggcgaggtcatctgtcggtgatggccgctgataaaccctccgagcgggag
gtcatggaggcggagtcaccgggttcatcgtctgacctcaatcgctctgacctcgacccc
atctacatcggtggattaccggcctctcggccaatcaggaggcaggtcgtggctcgctcg
ttcgtgggctgcatgaagaacgtggagatcgctcgtacgaacttcgacctgctcagagag
tcgtacggagtgaagaaaggctgcgtcctcaagcccgtccgcagcgtgtcggtgttcggc
ggagggtttctgcagatgcctgcgctcctctttgctcctcacacggaggtcatgagcagc
ttctccagcagacgcgagcgaggcgtgatcctggcggggttcagctcgccccgtcacacg
cagcagtccttcctgctggtgatgctggagtccggatcgctggaggttcatgtgggcgtg
gccgggggcggagccgtgcacagagcagtcgtcaaatcacagaacggctccttcagtgac
ggacaggagcactctctcattctgcagaggaacaaacggtccatcacagtgtttgtggac
gagcagaaccatgcgatggtgaagctgggctcgtccgctgacaaacctctggctctggag
cggctcttcatcggcggcgttcctccgggagagacgggatccagagactccttctacggc
tgcatcaggaacacagcggtggacggcatgctgctggatctgtcttctgctctgcgctac
gaggacgtggacatggacagctgtttactggaggagagacccaaacgtgtgcttctgcct
gatgagctggaggcggagccgacctctgaccccgccacacgaccgctgtctcccccggag
gagctgagcgcgtttacacccggcagcagcagctgtgcagcagcagatgacacagaaaca
atcccagaatccctgcagttcggcctgaaccgacacagtcatgtgatcatgggcttcaag
aacaagaccgtcagaaccagttttgtggtgaagctgtcggttcggacgttcgcgcgcagc
ggcgttctcttctacatggccaacgcaaaccagcaggattacgccgttctgcaggtgcag
ggggggcgtctgcagctgtcatgtgacctggggaaaggccccgcccacgcctcgctgacc
acgcccatcagcgacggcctctggcacaccgtgaaggctgagttcagtaagaagacggtg
atggtcagtgtggacgggatcgaatctgaccgcacgcccactaaaggacacacgctggac
gtggaggggaagttgtacctcggaggacttcctgccacatacacggccaggagaatcgga
aacgtgacacacagtctggcggcgtgtgtccaggacgtgatgttcggcggggtccagatg
aacctgagcgctgcgctgtcgtctcactccgccggggtctgcttcagacgcgctcagagc
ggaagcttcttcagcggcagcggatacgccgctttcatgaaagagggatataacgtgggc
tccgacctcaccgtcagtctggacttccgctccacggcgccggacggggttctgttggga
atcagcagcactaaagtagacgccatcggcctggagctcgtcaacggacaggtggtgttt
aacgtgaataacggcgcgggtcggatcacggcgagcagcaggagcgctgtgtccatgtgt
gacggccgctggcggaccctggtggccaagaagcagaagcacagcttgagtctgaccgta
gacggcgtgacggtgaccgcggagaacccctactcatcctccacctcagccgagaccaaa
aaccccatctatgtgggcggatacccagcggacgtgaagcagaactgtctgagctccaga
gaagcgttccgcggctgcatgaggaacctgcgtgtgatgaagggtcacgtcaccgatgtg
ctggacttcagcgctgccttcgctcatccacacgtctcccctcactcctgcccgactgct
gcttaa
DBGET
integrated database retrieval system
