Carassius gibelio (silver crucian carp): 127945977
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Entry
127945977 CDS
T08819
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF2-like isoform X1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04120
Ubiquitin mediated proteolysis
cgib04137
Mitophagy - animal
cgib04144
Endocytosis
cgib04340
Hedgehog signaling pathway
cgib04350
TGF-beta signaling pathway
cgib04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
127945977
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
127945977
04350 TGF-beta signaling pathway
127945977
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
127945977
04137 Mitophagy - animal
127945977
09144 Cellular community - eukaryotes
04520 Adherens junction
127945977
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgib04131
]
127945977
04121 Ubiquitin system [BR:
cgib04121
]
127945977
03029 Mitochondrial biogenesis [BR:
cgib03029
]
127945977
Enzymes [BR:
cgib01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
127945977
Membrane trafficking [BR:
cgib04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
127945977
Autophagy
Mitophagy
Other mitophagy associated proteins
127945977
Ubiquitin system [BR:
cgib04121
]
Ubiquitin ligases (E3)
HECT type E3
127945977
Mitochondrial biogenesis [BR:
cgib03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
127945977
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
127945977
NCBI-ProteinID:
XP_052398165
LinkDB
All DBs
Position
A3:complement(9820706..9875759)
Genome browser
AA seq
766 aa
AA seq
DB search
MSNQGVRRNGPVKLRLTVLCAKNLVKKDFFRLPDPFAKVVVDGSGQCHSTDTVRNTLDPK
WNQHYDLYIGKSDSITISVWNHKKIHKKQGAGFLGCVRLLSNSINRLKDTGCEYQRLDLN
KLGPNDSDTVRGQIVVSLQSRDRIGTGGPVVDCSRLFDNDLPDGWEERRIASGRIQYLNH
ITRSTQWERPTRPASEYSSPGRPLSCIVDENTPIMTPNGAAGVPVDDPRVQERRVRSQRH
RNYMSRTHLHTPPDLPEGYEQRTTQQGQVYFLHTQTGVSTWHDPRVPRDLSNVNCEELGP
LPPGWEIRNTATGRVYFVDHNNRTTQFTDPRLSANLHLVLNPSPNGSRGAVEAQSSRPAQ
LKEQAQSVVSPANLPEDPECLTVPKYKRDLVQKLKILRQELSQQQPQAGHCRIEVSREEI
FEESYRQVMKMRPKDLWKRLMVKFRGEEGLDYGGVAREWLYLLSHEMLNPYYGLFQYSRD
DIYTLQINPDSAVNPEHLSYFHFVGRIMGMAVFHGHYIDGGFTLPFYKQLLGKPITLDDM
ESVDPDLHNSLVWILDNDITGVLDHTFCVEHNAYGEIIQHELKPNGKNIPVTQDTKKEYV
RLYVNWRFLRGIEAQFLALQKGFNEVIPQHLLKAFDEKELELIVCGLGKIDINDWKSNTR
LKHCTPDSNIVKWFWRAVESYDEERRARLLQFVTGSSRVPLQGFKALQGAAGPRLFTIHQ
IDASTNNLPKAHTCFNRIDIPPYEIYDKLYDKLLTAIEETCGFAVE
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgtctaatcaaggagttagaagaaacgggcccgttaagttacgtttaacagttctttgc
gcaaagaacctggtgaagaaagacttcttccgactgccagaccccttcgctaaggtggtg
gtggacggttcggggcagtgccactcaacagacacagtgaggaacacgctggaccccaaa
tggaaccagcactatgacctgtatatcgggaagtcggactccatcaccatcagcgtgtgg
aaccacaagaagatccataagaaacagggagcgggattcctgggatgcgtacgactcctc
tccaactccattaaccgactcaaggacacaggctgtgagtatcagcgtttggacctgaac
aagttggggcccaatgacagcgataccgtgaggggacagatagtagtgagtcttcagtcc
agggacaggatcggcactggagggccagtggtggactgcagtcgtctgtttgacaatgac
ctgcctgatggctgggaggagaggagaattgcatctggccggatccagtatctgaatcat
atcacacgcagcacccaatgggaaagacctacaaggcctgcatccgagtactcgagcccc
ggccggccactcagctgcattgtggatgagaacacgcccatcatgacgcccaacggggca
gcaggcgtacctgtggatgacccccgggtgcaggagcgaagggttcgctctcagagacac
agaaactacatgagcagaactcacctacacacaccgccggacctgcccgagggatacgag
caaaggaccacgcagcagggtcaggtctatttcctgcacacacagacgggcgtcagcaca
tggcacgaccccagagtgcccagggatctcagtaatgtgaactgtgaggagctgggccca
ttgcctccaggctgggagatcagaaacacagccaccggacgcgtgtactttgtggaccac
aacaatcgaaccacacaattcacagacccgcgtctctccgctaacctgcacctcgtccta
aatcccagtcccaatggctcgcgtggtgctgttgaggctcagagcagtcgtcccgcacag
ctgaaggagcaggctcagtctgtcgtgtctcctgcaaatctccctgaggaccctgaatgt
ctcacggtgcccaagtacaagcgagacctggtgcagaaactgaaaatcctgagacaggag
ctgtcccagcagcaaccgcaggcgggacactgccgtattgaggtctcgcgggaggagatc
tttgaggaatcatatcggcaggtgatgaagatgaggccgaaggacctgtggaagaggttg
atggtcaagttcagaggagaggagggtctcgactatggtggagtcgcgagggagtggtta
tacttgctgtcacatgagatgttaaatccatactatggactgttccagtattcacgagat
gacatctacacgctgcagatcaacccggactctgccgttaatcctgagcatttgtcttat
ttccacttcgtggggaggattatgggaatggctgttttccacggtcactacatagacgga
ggcttcactctgcccttctacaagcagctgctggggaaacccatcactctcgacgacatg
gagtcagtggatccagatctccacaacagcctcgtctggatcctagataatgacatcact
ggggtgttggaccacacgttctgcgtcgaacacaatgcatacggagagatcattcagcac
gagctcaaacccaatggcaagaacatccctgtcacccaggacaccaagaaggagtatgtg
agactttatgtgaactggcggttcctgaggggcatcgaggctcagttcctggccctgcag
aaaggctttaatgaggtcatcccacaacacctactcaaagcgtttgatgagaaagagttg
gagcttattgtgtgtggactcgggaagatcgacatcaatgactggaagtcaaacacccgt
ctgaagcactgcacacctgacagtaacattgtgaagtggttctggcgggccgtggagtcg
tatgatgaggaaaggagagccagactgctgcagtttgtcaccggctcctccagagtccca
ctacaaggattcaaagccctgcaaggtgctgctggacctcgtctcttcaccatccatcag
atcgacgccagcaccaataacctgcccaaagcacacacttgcttcaaccgtatcgacatt
cctccatacgagatctacgataaactctacgacaaactgctgacggccatcgaggagacc
tgcggcttcgctgtggaatga
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