Carassius gibelio (silver crucian carp): 127946049
Help
Entry
127946049 CDS
T08819
Name
(RefSeq) double-stranded RNA-binding protein Staufen homolog 2 isoform X1
KO
K17597
double-stranded RNA-binding protein Staufen
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cgib01009
]
127946049
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgib03019
]
127946049
Protein phosphatases and associated proteins [BR:
cgib01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
127946049
Messenger RNA biogenesis [BR:
cgib03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
127946049
mRNA cycle factors
Stress granule specific factors
127946049
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
Staufen_C
Dicer_dsRBD
Motif
Other DBs
NCBI-GeneID:
127946049
NCBI-ProteinID:
XP_052398292
LinkDB
All DBs
Position
A24:complement(12651879..12770760)
Genome browser
AA seq
684 aa
AA seq
DB search
MAQVKVQTSAPLSGPGLTAVAPAVAMPSPGALGLQPTINGTVPATTPTCPSPASGFVDST
VPASPSGPPQENMANPKEKTPMCLVNELARFNRIQPQYKLLNENGPAHAKIFTVQLCLGN
QVWESEGSSIKKAQHSAATKALTESVLPRPLPRSPKADCNSNPGSITPTVELNGLAMKRG
EPAIYRPLDPKPIPNYRANYNFRGMFNQRYHYPVPKVFYVQLTVGNNEFIGEGRTRQAAR
HSAAMKALQALKNEPIPERPPQCSEEKIETEENSDVSKSEISLVYEIALKRNLPVIFEVL
KESGPPHMKSFLTRVTVGEFSAEGEGNSKKLSKKRAALSILLELKKLPVLPVVEKPKVHY
KKRPKTILKTGPEYGQGMNPISRLAQIQQAKKEKEPEYMLLSERGMPRRREFIMQVKVGT
EVTTGTGPNKKVAKRNAAEAMLLQLGYKASTPLQNTLEKMDNKGWNGQRAAFPETTTNTQ
KGILHLSPDVYQEMEASRNKGVSGAPGNYLTPKDIGQGSTGSFYTPSVGSTAAIARELLL
SGTSPTAEALILKGKAPALACGSIQPSQQLEYLAHIQGFQVQYSDRQTDKEFMTYLTLSP
VQMTFHGIGSSIPASHDQAALSALKQLSEQGLDPVDGPIKVENGSCDMYVHTEPQVKRLA
ERTDSKPTNSGTTAQDCKDSKAVV
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atggctcaagtgaaagtgcagacatcagcccccttgtctggacctggcctgaccgccgtt
gcgcccgctgtggccatgcccagcccaggagctctgggtctgcagcccaccatcaatggc
acagtgccagccacaacgcccacctgccccagccctgcctctggctttgtggactccact
gtaccagccagcccgtcaggccctcctcaagaaaacatggcaaaccctaaagagaaaact
cccatgtgtttggtgaatgagttagcccgtttcaacaggattcaacctcaatacaagttg
ctgaatgagaacgggccagcacatgctaagatcttcacggtgcagctgtgcttggggaac
caggtatgggagtcagaaggcagcagcatcaaaaaggctcagcactccgcagctaccaag
gccctgacagagagcgtcctcccccggccgctgcctcgctcacctaaagccgactgcaac
agcaacccaggcagcatcactcctacagtggagttgaatggcttggccatgaagcgaggg
gagccagccatctacagacccctggaccccaaacccattcccaactacagagccaattac
aactttagaggaatgttcaaccagaggtaccattacccagtgcctaaggtattttatgtg
cagctgacagtggggaacaacgagtttatcggagaggggcggactcgccaagctgcccga
cacagtgcagccatgaaagcccttcaagccctgaagaacgaacccattccagagagacca
cctcagtgttcagaggagaagatagaaacggaggagaacagcgatgtcagcaaatccgag
atcagcctggtctacgagatcgcccttaagaggaacctgcctgttatctttgaggtgctg
aaggagagcggacccccgcacatgaaaagcttcctcacacgtgtgacggtgggagagttt
tcagccgagggtgaggggaatagcaagaaactttccaaaaagagagcggccctctccatc
ctactggaactgaagaaactgccagtccttcctgttgtggagaaacccaaagtgcattac
aagaagcggcccaagaccattttaaagacagggccagagtatggacagggcatgaaccct
attagcagactggctcagattcaacaggccaaaaaggagaaggagcccgaatacatgctg
ctttcagagagaggaatgcctcgccggagagaattcatcatgcaggtgaaagtcggtacc
gaggtgaccacaggaactggtcccaataagaaagtggccaagcgcaatgcagctgaggcc
atgctgcttcaactgggctacaaggcatctacaccattacagaacactctggaaaagatg
gacaacaaaggctggaatggacaaagggctgcttttcctgaaacaacgaccaacacccaa
aaaggaattcttcacctctccccagatgtttatcaagaaatggaagcgagccggaataag
ggagtctctggtgcccctggaaactacctgacacccaaagacattggtcaagggtccaca
gggtcattctacaccccgtcggtgggcagcaccgcagccattgcacgagagctactgcta
agcgggacgtcgcccaccgctgaggccctgatcctgaagggaaaagcacctgctttggcc
tgtggctctattcagccttcccagcagctggagtacttagcccacattcaaggcttccag
gtgcaatactctgatcggcaaactgacaaagagttcatgacctacctgaccctctcacct
gtgcagatgactttccacggcattgggagctccattccagctagccatgaccaggctgct
cttagtgccttgaaacagctgtcagaacaaggactggaccctgtggatggaccaatcaag
gtagaaaatggatcatgtgacatgtatgtacatacagagccacaagtgaaacgtctagcc
gagaggacggacagcaaaccgactaactcaggcaccactgctcaggactgcaaggattca
aaggccgtcgtctag
DBGET
integrated database retrieval system
