Carassius gibelio (silver crucian carp): 127946224
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Entry
127946224 CDS
T08819
Name
(RefSeq) nucleoporin p58/p45-like isoform X1
KO
K14307
nucleoporin p58/p45
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
127946224
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgib03019
]
127946224
Messenger RNA biogenesis [BR:
cgib03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
127946224
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_FG2
GCP_N_terminal
FapA
Nup49_C
Tox-ODYAM1
PSY3
NET2A_C
COG2_N
PBC
Phage_int_SAM_2
Motif
Other DBs
NCBI-GeneID:
127946224
NCBI-ProteinID:
XP_052398604
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Position
A24:7357168..7367789
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AA seq
588 aa
AA seq
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MSSFNFGTSTLGSTGTGGGFSLGAASSAPAAGTSGFAFGGFGTPTSTPATTSTTSTLGFG
SSLFAQKPATGITFNTPASGAAASTTGLTLGSLTTSTAGSTGFSLGFGKPAASAAPFSLT
ANTSAAPGTGLTLGSVLTSTAPQTSSTGFSLNLGGAAATSSAPASGFSFGSSLFSNPSLT
GLGQSTLGGPLSLGGLVATTSAPALSLGLGGVDFSTSSEKNTDKLSSTRPEDSKALKDEN
LPGPICQDVDNFQKFVKEQKQVQEEISRMSSKAILKVQEDIKTLRQLLSVVASGLQRNSL
SIDKLKLETSQELKNADIAIRTQKTPPGLQHENTAPSDYFRALVEQFEVQLQQYRQQIEE
LENHLTTQSSGSHITPQDLSQAMQKLYQTFVALAAQLQGVHENVKTLKHQYLGYRRAFLD
DSTDIFESKRVIGKKWQSSPHVTTGPAPFGSVPNAAAVAMAATLTQQQQPAPGPQASLGA
SFGTPFSSGIGTSLGSSSLGAFGSGPGFGGVATGGLSYGFSSSKPSGGSLSAGFGTSNTS
GFNFSNPGLNASAGLTFGVSNTQTPGFGTGGPLLQLKKPPAGNKRGKR
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgtccagctttaacttcggcacaagtaccctcggctccaccggcaccggaggaggcttc
tcacttggagctgcgagcagtgcacctgctgcaggtacgagtggatttgcattcggagga
tttggcacgccgacgtccactccggccaccaccagtaccacctccacactgggatttggg
tctagtttatttgcccagaaaccagcaactggaatcacctttaacacacctgcctcaggg
gctgctgcatccactactggccttactttagggagtcttaccacctctacagctggttcc
actggattcagcctgggcttcggaaagccagcagcctccgctgcacctttctcattgaca
gccaacacctctgcagcaccaggcacaggcctgactctgggatccgtcctgacctccaca
gcccctcagaccagctccactgggttctccctcaacttaggtggagctgccgccacttcc
tccgctcctgcctcgggtttttcttttggttccagtctcttttccaacccctccttgaca
ggtttgggacagtccactttaggtggacctctgagtctgggtggtttagtcgcgaccacc
tctgcccctgcgctcagtcttggactgggtggagtagacttcagtacttcctctgaaaaa
aatactgacaagttatccagcaccagaccagaagacagtaaagccctcaaagatgaaaac
ctgccaggtccaatctgtcaagatgtggacaactttcagaaatttgtcaaagaacagaag
caagtccaggaagagatcagcaggatgtcttctaaagccattctcaaagtgcaagaggac
atcaagacgctcagacagctcctgtccgtcgttgccagtgggctgcaaagaaattcactc
tccatagacaaactgaagttggaaacttctcaggaattgaagaatgccgatatcgcaata
cgcacccagaagacgcctcctggactccaacatgagaacacggcgccttccgattatttc
cgggctctggtggagcagtttgaggtgcagttacagcagtaccgtcagcagattgaagaa
ctggagaatcatctgaccacgcagagcagtggctcccacatcacccctcaagatttgtcc
caggccatgcagaaactctaccagacgtttgttgcacttgctgcacagttgcagggagtt
catgagaatgttaaaactctcaaacatcagtatctgggctacagacgagccttcctcgac
gactccactgacatattcgagtcaaaacgtgttatcggcaagaaatggcagagctctccg
cacgtcaccacaggccccgcccccttcggcagcgttcccaacgcagcagccgttgccatg
gctgccactctcactcagcagcagcagccggctccaggaccacaggcatccttgggggcc
agttttggcactcccttttcctctggtattggcactagcttgggctcatccagcctcgga
gcatttggtagcggccctgggtttgggggcgtggcaacaggaggtttgtcgtacgggttt
tcctctagcaagccatctggaggaagcctgagcgcagggtttggaacgtcgaacacctct
ggcttcaacttcagtaaccctggacttaatgcatcagctgggttgacctttggagtttcc
aacacgcaaacacctggatttgggacaggagggccactgctacagctcaaaaagccacca
gcaggaaataagaggggcaagagataa
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