Carassius gibelio (silver crucian carp): 127946238
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Entry
127946238 CDS
T08819
Name
(RefSeq) RB1-inducible coiled-coil protein 1-like
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
127946238
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cgib01009
]
127946238
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgib04131
]
127946238
03029 Mitochondrial biogenesis [BR:
cgib03029
]
127946238
Protein phosphatases and associated proteins [BR:
cgib01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
127946238
Membrane trafficking [BR:
cgib04131
]
Autophagy
Autophagosome formation proteins
ULK complex
127946238
Mitochondrial biogenesis [BR:
cgib03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
127946238
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
ubiquitin
DUF6950
Motif
Other DBs
NCBI-GeneID:
127946238
NCBI-ProteinID:
XP_052398638
LinkDB
All DBs
Position
A24:complement(3605358..3623996)
Genome browser
AA seq
1624 aa
AA seq
DB search
MKLYVFQVNNGSTLTFDTELAVQTVLDLKHAIQAKYKIAIQHQVLVVNGGECMVAERRVC
SYSAGTDTNPIFLFNKEMILSDRAPTIPKTTFSIENEMELKVEESLMMPAVFHTVASRTQ
LAVEMFEVAKKLCLFCERLVHDEHLQHQGWAAIMANLDDCTLSYQKLLMKFDTAYTNYQQ
DFEDIKLKLTKLGTAVSVMAKIPLLECLTRQSYRESLEKSSSPHPRTTDEEDENEDEEVG
ETSTQSAILCPADSQKNRKSFSPVSASGEASSQASSSPQDRLKSSCSLKEALEEEEESPE
RGATPSFNVTLLDWINVQDRPNDVESVVRKCFDSINRLDPRIIQPFLTECRETITKLDNQ
NMKAIKGLEDRLYALDQMIASCKRLVNEQQELAQGFHANQKRAENLKDTSVLPDLCLSHA
NQLMIMLTNHRKLLDIKQKCTTAKQELANNLQVRLKWCCYVMLHADQDGEKLQALLRLLT
ELLERVRVVEALSTVPQMYCLAVVEVVRRKMFIGHYRQWASALVKDGKNLYEAEKVQRES
FGKLFRKSFLRNRLFRGLDSWPPSSFCTRKPRKFDFELPDISLSDLQYLKTCCPSEVQPY
LRVPTLCDFEPLNQHVEVLHQLVQAVQSVDEMSKTITDLLNEQKISCSQSAQRSTALTPR
SESTTEIISTSTKTLSTLSLKAPDCQPLVLPGPLEDLSPDSIDAQTFDFETIGHPNMDPV
LQQGSLDLDSLGGSPESDFMSAVNEFVIEENLLSPNPISDPTSPEMMVESLYSSVINAID
SKRIKDTTTLEKENSKIAALKLSADRYRSAAEESHNSLRKVKEDLYHFRGLVLKEQRDFG
FALKTMTTEVRNALNSVRYCHEENLRQTQQTSLQSLKDDHEKQMQTLLEELEGNQKIVRD
IQRAMLELEGLVERKEKEISQLESERARSMQELKDLHKQTLLDLEQKLLKQSDELKAALL
SKDEVTVQLENLHFEIEHSQQKVRQEMEKAEKVHLQELETRLKQQHEAELESLRLEKESA
LDKLVQENLVKLRDLMDCHSAELKEREGRLKDLEARITELADARCKLEVEMALKEAEMED
MRLQYEEAKSTQEEVLREELTTQTATLQTQIDMLNQQLQQKNEEYEVGLAELRALMRLEK
DHCISELVDRHEEESTMLRHEFSALKQKSQDAEKDCEERVQKIQHDHQDQLDALQRQKED
DQRTFQEKERELSTVIGDLQAENTLLSGRLEQERVEALQRVEKEKEDAVKAALQEASRDF
QLQKEETETRLLGQIELLENQLKERQSTDIVAPTVEKTETGVETSTALSLDSGQWTEERA
SLLAQLELLERTKNEEMQNLKTSLIAEQQTNFNTVLTREKLKKEHLINDLTEKLKNLTQQ
QEKDKGLIETLSEDRASILQEKKQMEEELNRLRSTVLVSSSFFPPNPIPVFTEALGACGP
AHPEVLSPSTPDPERLASMAALKDEERVESAVEASMMTVHDNPMLSEEKQRILILERTLH
MKEEENKRLSQRLMSQSMSSVSSRHSEKIAIRDFQVGDLVLIILDERHDNYVLFTVGPTL
YFLHSESLTALDLKPATGATRRPWVLGKVMEKEYCQAKKALNRFKVPLGTKFYRVKAVPW
NKKV
NT seq
4875 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgtatgtgtttcaagtcaacaacggaagcacgttgacatttgacactgaactt
gctgtccaaactgttttggaccttaaacatgccattcaggccaaatataaaattgcaatc
cagcaccaggtgctggtggtcaatggaggggagtgtatggtggcagagaggcgcgtgtgc
agctacagcgccgggacagacaccaacccgatcttcttattcaacaaagagatgatcctg
tctgaccgagctccaaccatccccaaaacaaccttctcaatagagaatgagatggagctg
aaggtggaggagtccctcatgatgcctgctgtctttcacaccgtggcctcccgcactcaa
ctggctgtggaaatgtttgaggttgccaagaagctttgcttgttctgtgagcgtctggtc
catgacgaacaccttcagcaccagggatgggcggccatcatggctaacctggacgactgc
actctgtcctatcagaaactcctcatgaaatttgacactgcttatacaaattaccaacag
gattttgaagacatcaaattaaaactcacaaagcttggcactgctgtctcagtcatggca
aagattccactgctagagtgtttgactcggcagagctatcgagaaagcctggagaagtcc
agctcccctcacccaagaaccacagatgaagaagacgagaatgaggatgaagaagtagga
gaaacatccactcagtccgcaatcctctgtcccgctgacagccagaagaatcggaagtca
ttctcgccagtgtctgcttctggagaagcgtcgtcccaggcgtcctcctcccctcaggac
agactgaagagcagctgtagtctaaaagaagctctagaggaagaggaggagtctccagag
aggggagccactccctctttcaatgtcacactgttggattggatcaatgttcaggacaga
cctaacgatgtcgagtcagtagtgaggaagtgttttgattcaatcaacaggctcgaccca
cgaatcatccaaccctttctaactgaatgccgtgagacgattaccaaattggataatcag
aacatgaaggccatcaaaggtcttgaggacagattgtatgctcttgaccaaatgatagcc
agctgtaaacggttggtcaatgaacagcaggaacttgctcagggatttcatgccaatcag
aagagggctgaaaacctgaaggacacctcggtgctgcctgacctgtgtctgagtcatgcc
aatcagctgatgatcatgctaaccaatcacaggaagctactagacatcaagcagaaatgt
accactgccaaacaggagctcgccaacaaccttcaagttcgactcaaatggtgctgctac
gtgatgcttcacgctgatcaggatggagagaagctgcaggctcttctgaggctgctgacg
gagctgctggagcgcgtgcgggtggtggaggcactcagcactgtgccacagatgtactgt
ctcgccgtagtggaggtggtcagacgcaaaatgttcataggacactacagacaatgggcc
agtgctcttgtcaaagatgggaaaaacctctatgaggcagaaaaagtacaaagggaatcc
tttgggaagctcttcaggaaatcgtttctcagaaaccggttgtttcgtggactggactca
tggccaccctcttcattttgcacccgaaagcctcgaaagtttgactttgagcttccagat
atttccctgagtgacctgcagtatctcaagacctgttgtccttccgaggttcagccttac
ctcagggtccccacactgtgtgactttgagcctcttaaccagcatgttgaggttctccat
cagctggttcaggctgtgcagagtgtggacgagatgtcaaaaacgatcacagacctacta
aatgaacaaaagatttcctgtagccagagtgctcaaagatccaccgcattaacacccaga
tctgaaagcacaactgaaatcatctctacctccaccaaaactttgtccactctcagttta
aaagcaccggactgccaacccctggtgcttcctggtcccttggaggacctgtcacccgac
agcatagatgcccagacctttgactttgaaaccattgggcacccaaatatggatcctgta
ttacaacaaggctctttggacttggactcattgggaggaagtcctgagtcggatttcatg
tcagcagttaatgagtttgttattgaggagaacttgttgtcacctaatcccataagtgat
cccacaagcccagagatgatggtggagtctctttactcctctgtcattaatgcaatcgat
agcaaacgcataaaggacactactacgctggagaaggaaaattcaaagattgcagcactc
aagctgtcagcggacaggtaccgttctgctgcggaagagtcacataacagtttaaggaaa
gttaaggaagacctttaccacttccgaggtctggttctgaaggagcaacgagactttgga
tttgccctgaaaacaatgaccactgaggtccgaaacgctcttaacagtgtccgatactgt
catgaggagaacctaagacaaacgcaacaaaccagtctccagagtttgaaggacgatcat
gaaaagcagatgcaaaccctgctggaagagctggagggcaatcagaagattgttcgagac
atccaaagagcaatgctggaattggaggggctcgtggagcgtaaggagaaggaaatatca
cagctggagagtgagagagcacgctctatgcaagaactcaaagatcttcacaagcaaact
ctgctagaccttgaacagaagctcttaaagcaaagtgacgaactgaaagctgcattgctc
tccaaggacgaagtcactgtgcagctggagaaccttcactttgagatcgagcacagccaa
cagaaagtcagacaagagatggagaaggcagagaaggtgcaccttcaggagctggagaca
cggttgaaacaacaacatgaagcagagctggagtctctcagattggaaaaagaaagtgca
cttgacaaactcgtccaggagaacctggtgaagctcagagatctcatggattgccattct
gctgaactcaaggaacgcgagggacgcttgaaagacttggaggctcgcattactgaactt
gcagacgcccgctgcaaactggaagtggagatggctcttaaagaggccgaaatggaggac
atgagactccagtacgaggaggccaaaagcacccaagaggaggtgttgagagaggagctc
actacccaaacagccaccttgcagacgcaaatcgacatgttgaaccagcagctccagcag
aaaaatgaagagtatgaggtgggcctggccgagctccgagcgctcatgaggttggagaag
gaccactgcatctctgaacttgtggatcgacatgaagaggagagcaccatgctgcgccat
gagttttcagcactcaaacagaaatcgcaggacgcagagaaagactgtgaggaacgagtc
cagaagatccagcatgatcaccaggaccagcttgatgccttacagaggcaaaaggaggat
gatcagaggactttccaggagaaagagcgagagctatcgactgttatcggagacctgcaa
gcagaaaacacactactgtcaggaagactggagcaggagagggtggaggcccttcagaga
gtggagaaggagaaagaggacgcagtcaaagctgcattgcaagaggcctcaagagacttt
caactccaaaaagaggagaccgagacaagactgttaggacaaattgaactgcttgaaaat
cagcttaaagaaagacagtccactgacatagtggcccctactgtagaaaagacagagact
ggtgtggagaccagcactgcattgtcactggacagcggtcagtggaccgaggaaagggca
tcgctcctggcccaacttgagctcctggaacgaacaaagaacgaggagatgcagaacctg
aagacctcgctcattgctgagcagcagacaaacttcaatactgttctgacccgggagaaa
ctaaagaaagaacacctcatcaatgatctcactgagaagctcaaaaacttgacgcagcaa
caagagaaagataaaggtttgatcgaaacgctctctgaagaccgtgcctccatccttcag
gagaagaagcagatggaggaggaactgaaccgtttgaggagcaccgtcctcgtctcttca
tccttctttcctcctaatcccatcccggtcttcacggaagctctgggtgcctgtggccct
gcccaccctgaagtcctctcaccgtccacccctgatccagagagattggcgtccatggct
gcactgaaggacgaggagagggtggagtcagccgtggaggccagcatgatgacagtgcat
gacaaccctatgctgtctgaagagaaacagcgcatactgattttggaaaggaccttacac
atgaaggaggaagagaacaaaaggcttagtcaaagactgatgtcacagagtatgtcgtcc
gtctcgtcacggcactcggagaaaatcgccattcgagattttcaggtgggcgacttggtt
ctcataatcctggatgagaggcacgataattacgttctcttcactgttggtcccaccctt
tatttcctgcactcagagtctctcactgcactggacctcaaaccagcgacaggagcaacc
agacggccatgggttctaggaaaagtcatggagaaggaatattgccaagccaaaaaggcc
ctaaaccggttcaaagttcctctcggcactaaattctacagagtaaaggccgtgccatgg
aacaagaaagtgtaa
DBGET
integrated database retrieval system
