Carassius gibelio (silver crucian carp): 127946253
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Entry
127946253 CDS
T08819
Name
(RefSeq) double-stranded RNA-specific editase B2-like
KO
K13194
double stranded RNA-specific editase B [EC:3.5.-.-]
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cgib03041
]
127946253
Spliceosome [BR:
cgib03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
127946253
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
A_deamin
dsrm
DSRM_2
Motif
Other DBs
NCBI-GeneID:
127946253
NCBI-ProteinID:
XP_052398668
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All DBs
Position
A24:complement(16923698..17112355)
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AA seq
740 aa
AA seq
DB search
MASVPSSQVKCKFKRRRRRRSKRKEKMNMLSARITPFKYMSPAANCTEDEDTLSTSSAEV
KENRNTGNLEDCAIVPSDCQTLFLSDSPRDGMSGLKRKRPLEEDNNGHLCKLRLFCKKLA
WSDAPKNALVQLNELRPGLQYRMVSQTGPVHAPLFSIAVEVNGLTFEGTGPTKKKAKMKA
AEMALKSFIQFPNAPQAHLAMGGRNNPTADFTSDQADFPETLFKGFEPDGCRSAESELLS
SALRLRHTLDLMVVQARQGDPCPSPPQYPTTQPSPVVLLNDLRPGLRYACLSEHVQGKRA
HRSFIMAVRVDGRIFEGSGRSKKQAKRQAAMCALQALFNFRLPPEARAGHWPSRIKCPHL
PQEFADAIFHLVREKYVELAGCSSLLHARHKGLAGIVMTRGLDLRQAQVVALSTGTKCIN
GEYISDQGLAVNDCHAEITTRRALLRFLYSQLELHLSKRKEDWEQSIFVRHRDSCLRLRE
NVLFHMYISTSPCGDARVNSPYEITSDLHSNRHLVKKFHSHLRTKIESGEGTLPVKSTGP
VQTWDGVLQGERLITMSCTDKISRWNVLGLQGALLSHFVEPVYLYSLTVGSLRHTGHFSR
MMNHRLERVGPLPTCYYRNQPFLSGLSNSDCRQQGKSVCYSVNWTTGDIQLEMLNASTGK
RRDSGAPSRLCKHALFERWIRLYRKLVVRGASGMPLYCEAKQAAGTYQTVKLQWLKGLQE
AGLGTWVRKPPEQENFTLTV
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggcatcggtccccagcagccaagtcaaatgcaagttcaagaggaggaggaggagaagg
tctaagcgaaaagagaaaatgaacatgttgtctgcacggatcacccccttcaagtacatg
agcccagcagccaattgcacagaagatgaggacacattgagcaccagtagtgctgaggtc
aaggagaaccgtaacacaggaaatttggaagattgtgccattgttccgtcagactgccaa
acactcttcctgtctgattcccccagggacgggatgtctggcctcaagcgaaagcgacct
ttggaggaggacaataacggacatttgtgcaaattgcgtctgttctgcaagaaactggca
tggtctgatgcaccaaagaatgctctggtccagttaaacgagctgagaccgggtctacaa
taccggatggtctctcagacaggaccggtgcatgcacctctcttttccatcgctgtggaa
gtcaacggactcactttcgagggcaccgggcctaccaagaaaaaggctaagatgaaggca
gctgagatggctctcaagtcattcatccagtttcccaatgccccgcaagcacacttggcc
atgggcggacggaacaaccccacggccgacttcacatcggaccaggccgacttcccagaa
acactgttcaaaggcttcgagcctgatggctgtcgctctgccgagagcgagttgctgtct
agcgccctccgtttgcgccacacgttggacttgatggttgtgcaggctaggcaaggagat
ccttgcccttctccacctcagtatcccaccacccagcccagcccggtcgtcctgctcaat
gacttgcgccccggcttacgttacgcctgcctgtcggagcatgtccaaggcaaacgggca
caccgcagcttcatcatggccgttagagtggatggcaggatattcgagggctcgggtcgc
agtaagaagcaggcgaagaggcaggcggcaatgtgtgccctacaggcgctcttcaacttc
aggctgccacctgaggcgagagcgggacactggcccagtaggatcaaatgccctcatttg
ccccaggagtttgcagatgcaatattccacctggtgcgagaaaagtacgtggagctggcc
ggctgctcctcactgctgcacgcacgtcacaaaggcctggcgggcatcgtcatgaccaga
ggtctggatctcagacaggcccaagtggtggcgctatcgaccggcactaaatgcattaat
ggagagtatatcagtgaccagggtctggcggtcaacgactgtcacgctgaaatcaccacc
agacgagccctgctgcggttcctgtactcccaactagagctacacctcagcaaaaggaaa
gaggactgggagcaatcgatcttcgtacggcacagagattcctgtttgagactccgagag
aacgtcctcttccacatgtacatcagtacgtcgccctgcggggacgcccgcgtcaactcg
ccgtatgaaatcacctccgacttgcacagcaacagacacttggtaaagaagtttcacagc
catcttcggacaaagattgaatcaggggagggtacgctgcccgtgaagagcaccggtccc
gtccagacgtgggacggagtccttcaaggagaacgtctcatcaccatgtcatgcacagac
aagatttccaggtggaatgtgctcgggctgcagggggcgctactcagtcattttgtggag
ccagtgtatctgtacagcctgacggtgggcagcttgagacacacgggtcacttctccagg
atgatgaaccacaggctagagagagtcggacctctgcccacctgctactaccgtaaccag
ccttttcttagcggcctgagcaacagtgactgcaggcagcaggggaagtctgtgtgctac
agtgtcaattggacgacaggtgacatccaactggagatgctcaacgcgtctactgggaag
aggagggactccggggctccatctagactttgcaagcatgcgctttttgaacgttggatc
agactctatcgcaagctggtggtccgtggggcgagtggtatgccgctgtactgtgaagcg
aagcaggcggccggcacctaccagactgtgaagctgcagtggttgaagggtctacaggaa
gcaggattagggacctgggtcagaaaacctcccgagcaggaaaacttcactttgactgta
tga
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