Carassius gibelio (silver crucian carp): 127946432
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Entry
127946432 CDS
T08819
Name
(RefSeq) short transient receptor potential channel 1-like
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cgib04040
]
127946432
Ion channels [BR:
cgib04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
127946432
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_4
MTR4-like_stalk
LHD_TRPY1
TALPID3
Motif
Other DBs
NCBI-GeneID:
127946432
NCBI-ProteinID:
XP_052398962
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Position
A24:18676424..18700534
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AA seq
797 aa
AA seq
DB search
MHISALPYSLSVIMAALYQGTDSSSPDKYMALKDVREVKEETTLDEKLFLLACEKGDYYM
VRRLLEEKRHGELNINCVDVLGRDAVTISIENENLDILQLLLEHGCQATDALLVAIDSEV
VGAVDILLNHQPRRSSRPSIAKLIQRIQNPEYSTTMDVAPVILAAHRNNYEILTMLLKQD
ISLPRPHAVGCECTLCNVKNKKDSLRHSRFRLDIYRCLASPSLIMLTEEDPILRAFELST
DLKELSLVEVEFRNDYEKLARQCKMFAKDLLAQARNSRELEVILNHTSSEDHIDKRGLLE
ERMNLSRLKLAIRYNQKEFVAQSNCQQFLNTVWFGEMASYRRKHTCLKILYVLSVALMWP
LLSICYLLGPRSRVGQVIHTPFVKFIIHSASYFTFLLLLNLYSLVYNEDKKNTMGPPLEL
IDYFLILWIIGMVWCDVKRLWYEGLEDFLEESRNQLSFVMNSLYLATFALKVVAHSKFKN
VGEEARKNWDAFHPLLVAEGLFAFANVLSYLRLFFMYTTSSILGPLQISMGQMLQEFGKF
LGLFLLVLISFTIGLTQLYGKDKDLSSTKNITKDCEGIFCREQSSDTFHTFMGTCYALFW
YIFSLAHVALFVTRISYTDELRPFVGALIVGTYNIVVVIVLTKLLVAMLHKSFRQIANHE
DKEWKFARAKLWLSYFDDKCTLPPPFNILPSPKTVCYLVISLSKWICSHTSTGKVKRQNS
LKEWRNLKQKRDENYQKIICCLVHRYLTSTRQKMQSTDQATVENLNDLRQDLSKFRNEMR
DLLGFRTSKYAMFYPRS
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgcacatcagtgctttgccgtactctctctccgttataatggctgctctatatcagggc
acggactcgtcttctccggataaatatatggcgttaaaagacgtcagagaggtgaaggag
gagaccactctggacgagaagctctttctgctggcctgcgagaagggagactactacatg
gtgagaagacttctggaggagaaacgacatggtgaattaaacattaactgtgtagatgta
cttgggagagatgcggtcaccatttcaatcgaaaatgagaatctagacatattgcagttg
ctcttggaacatggctgccaggccacagatgcattattagtggctattgattcagaagtg
gtaggagcagttgacatcctgctaaaccatcagcccaggcgttcctccaggccttctatt
gcgaaattgattcagcgcattcaaaacccagagtattccaccaccatggatgttgctcca
gtaattcttgctgcccaccggaacaattatgagattttgacaatgctgttaaagcaagac
atctctctaccccgaccccatgctgtagggtgcgagtgcaccctctgtaatgtgaaaaac
aagaaggacagtcttcgtcactcaaggtttcgtctagatatctaccggtgcctcgccagc
ccatccttgatcatgcttacagaagaagaccccattctgagagcattcgagctcagcact
gatctgaaagagctgagcctggtggaagtggagtttcggaatgattatgaaaaacttgcc
aggcagtgcaagatgtttgccaaggaccttctggctcaggcccgcaactctcgtgagctg
gaggtcatactgaaccacacatccagtgaggaccacatagacaagagaggcttgctggag
gaacgcatgaacctcagtcgcctcaaactggccataagatacaaccaaaaggagtttgtt
gcccagtccaattgtcagcagttcctgaatacggtgtggttcggtgagatggcgagctac
cgccgcaagcacacgtgcttaaagatcctgtatgttttgagtgtggcgctgatgtggcct
ctgctgtccatctgttacctgctgggaccccgttctcgagtgggccaggtcatccacaca
ccctttgtcaagttcatcatccatagtgcctcctacttcaccttcctgctccttctaaac
ctctactcactggtctacaacgaggataagaagaacaccatgggtccgcctttggagttg
atagactactttctcattctctggatcataggcatggtgtggtgtgatgtgaaacgtctg
tggtatgaaggattggaggacttcctggaagagtcgcggaaccagctgagttttgtcatg
aactcgctttatttggccacttttgccctaaaagtggtggctcatagcaagtttaaaaat
gttggggaagaggcaaggaaaaactgggatgcatttcatcccctcttggttgctgaaggt
ctttttgcattcgccaatgttctgagctatctccgtctcttcttcatgtacaccaccagc
tccatcttggggcctttacagatctccatgggccagatgctacaagagtttgggaagttt
cttggcttattcctgctcgtactcatctctttcaccattggcctgacacaactgtatgga
aaagacaaggacctctccagcaccaaaaatataaccaaggactgtgagggcatcttctgt
cgagagcagagcagcgacacctttcacacgtttatggggacatgctacgcgctcttctgg
tacattttttccctggcacatgtggctctgtttgttacaaggatcagctacacagatgag
ctgcggccgtttgttggtgcgcttatcgtcggtacatacaacattgttgtggtcattgtt
ctaacgaaactcctggtggccatgctgcataagagcttcagacagattgctaaccatgaa
gataaggagtggaagtttgccagggccaagctgtggctcagctactttgatgataagtgc
acactgcctccacctttcaacatcctcccctcacccaagactgtgtgctacctggtcatc
agcctgagcaaatggatctgttcgcacacttccacaggcaaggtcaagagacagaatagc
ctcaaggaatggagaaacctgaagcagaaaagagatgagaactaccagaagattatatgc
tgtcttgttcaccgttacctgacctccacaaggcagaagatgcaaagcacagaccaggcc
acggtagagaacctcaatgatctgcggcaagacctctccaagtttcgcaatgaaatgagg
gaccttttgggcttccgcacttccaaatatgccatgttttaccccagaagctaa
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