Carassius gibelio (silver crucian carp): 127946546
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Entry
127946546 CDS
T08819
Name
(RefSeq) polypyrimidine tract-binding protein 2-like isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cgib03041
]
127946546
Spliceosome [BR:
cgib03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
127946546
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_10
RRM_ACIN1
RRM_PARP14_3
RRM_Nup35
GlcNAc-1_reg
Motif
Other DBs
NCBI-GeneID:
127946546
NCBI-ProteinID:
XP_052399157
LinkDB
All DBs
Position
A24
Genome browser
AA seq
514 aa
AA seq
DB search
MDGIGDVAVGVKRGSDELLSGSMYNSPSSGLSSISDATSNGSDSKKLRVEDRVGDAPLSR
VLHIRKLPNDVSETEIIALGLPFGKVTNILTLKGKNQAFLELSTEEAAMTMVNYYSAVTP
HIRSVPVYIQYSNHKELKTDNSNQSGGTLTSGSNSSDGGGMASSPVLRIIIDNMFYPVTL
DVLQQIFSKFGTVMKIITFTKNNQFQALLQYNDPTNAQQAKVALDGQNIYNACCTLRIDY
SKLVNLNVKYNNDKSRDYTRPELPAGDGQPALDPTVVSALGKDSTSLLGKIPGALSPLSA
AAAAAAAAGRVALSGHSGASGVLLVSNLNEEMVTPHSLFTLFGVYGDVQRVKILFNKKDS
ALIQMADMNQAQLAMSHLNGQKMYSKIIRVTMSKHQTVQLPRDGLDDQGLTKDFTNSPLH
RFKKPGSKNFQNIFPPSATLHLSNIPQDITEEDLRVLFSNSGGTVKAFKFFQDHKMALIQ
MTTIEEAIQCLIDLHNYNMGNNHHLKVSFSKSTI
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggacggaattggtgatgtcgcagttggtgtaaagagaggatcagatgagctgctgtcc
ggcagcatgtataacagccccagttctgggctgagcagtataagcgatgcgacatccaac
ggtagtgacagcaaaaaacttcgagttgaagacagagtcggcgatgccccactatcccgc
gttcttcacattagaaagttacccaacgatgtctcggaaaccgagatcattgccctgggg
cttcctttcggaaaggtcaccaatatcctcacactgaaaggcaaaaaccaggcgtttctg
gagctcagcacagaggaagctgccatgacaatggtcaattattactccgctgtgacgcct
cacatccgtagtgtgccggtctacatacagtactcaaatcacaaagaactgaagaccgac
aattcaaaccagtcaggtgggactctcacatcggggtctaactctagcgatggtggtggt
atggcctccagtccagtgctgaggataatcattgataacatgttttaccccgtcaccctt
gatgtgctgcagcagatcttctcaaagtttggcaccgtcatgaaaatcatcacattcacc
aagaacaatcagtttcaggccctgttgcagtacaacgatccaaccaatgcgcagcaagct
aaagtggctctagatggtcagaacatatacaacgcctgctgcacccttcgaatagactac
tctaaactcgtcaacctgaatgtaaaatataataacgataagagcagggactacacaagg
ccggagcttcctgctggggatgggcagcccgctctggatcccactgtggtttctgccctg
ggtaaagattccacttccctgctcggtaagatcccaggtgctctgagcccgttgagcgcg
gctgccgccgccgccgctgcagctggaagagtcgctctgtccggacactcgggggctagc
ggagtgctgctcgtaagcaatctaaacgaagagatggttacgccccacagtctgtttacc
ctcttcggggtttatggggacgtgcagcgtgtgaagattctttttaataagaaagacagc
gcactgatacagatggccgatatgaaccaggctcagcttgcgatgagccatctaaacggt
cagaagatgtattcaaagatcattcgcgttacgatgtcgaagcaccaaaccgttcagtta
ccgagggacggtttagacgaccagggtctcacgaaagactttacgaactcacctctgcat
cgtttcaaaaagcccggctccaagaacttccagaacattttccctccttctgccacgctg
catctgtcaaacatcccgcaagacataactgaagaagacctccgagtcctgttctccaac
tccggtggcactgtgaaagcttttaagtttttccaagatcataaaatggctctaattcag
atgacaaccatcgaggaagctattcaatgcctcatcgacctccacaattacaacatgggt
aataaccaccacctgaaggtctccttctccaaatccaccatctaa
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