Carassius gibelio (silver crucian carp): 127946639
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Entry
127946639 CDS
T08819
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgib04131
]
127946639
Membrane trafficking [BR:
cgib04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
127946639
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
ig
Ig_2
LRR_9
LRRNT
Ig_C17orf99
Motif
Other DBs
NCBI-GeneID:
127946639
NCBI-ProteinID:
XP_052399285
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All DBs
Position
A25:3526338..3601498
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AA seq
615 aa
AA seq
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MVAGEVSGHSFLVACWQPILILMLGTVLSGSATGCPSRCECNVQERSVLCHRKKLMSVPE
GIPLETRLLDLSKNRIKTINPDEFSAFPQLEELELNENTISTIEPGAFNNLYSLQTLGLR
SNKLKLIQLGVFTGLSNLTTLDISENKIVILLDYMFQDLYNLRSLEVGDNDLVFISHRAF
HGLSSLEQLTLERCNLTSVPTEAFTHLHSLVTLRLRNLNINSIRDYSFKRLYRLKVLEIA
NWPYLDTMTTNCLYGLNLTSLTITNANLTSIPYLALRHLVYLRFLNMSYNPIQMIEGNRL
HDLLRLQELHLVGGRLMMIEPYSFRGLNYLKILNVSSNSLTTLEESVFHSVGNLETLALY
DNPLACDCRLLWVFRRRWRLNFNRQQPTCSSPEFVQGKEFKDFPDVLQPNYFTCRKSRIR
DRKPQQKFVDEGTTVHFICQADGDPTPVIMWLSPQKQFITTRTIGRLTVFPDGTLEVRYA
QIQDNGTYVCIASNAGGNDTALAHLHVHSYSPDWPNQPNKTLAFISNQPNDNGANGTRAT
VPFPFDIKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGNSKHNIEIEYVPRKSDAGMS
SSGNDGPRKFNMKMI
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggtagcaggggaagtgagtgggcacagcttcctggtggcatgctggcagcccattcta
atcttaatgctgggcacagtgctgtctggctctgccacgggctgcccatctcgttgtgag
tgcaatgttcaggagcgttcagtcttgtgccatcgcaagaagctgatgtccgttccggag
ggaatcccattagaaacacgactcttggacctcagcaagaatcgaatcaaaaccatcaat
ccggatgagttctctgccttcccacagctggaagagctggagctcaatgaaaacaccatc
tcaaccatcgagcctggggcttttaacaacctctacagtctgcagactctgggactgcgc
agcaacaagctgaagctcatccagctgggagtgttcacaggcctcagtaacctaacaacg
ctggacatcagtgaaaataagatcgtaattctgctggactacatgttccaggacctctac
aacctgcgctctcttgaggttggggataatgaccttgtcttcatatcccacagggcgttt
cacggcctcagcagcctggagcagctaacactagaaaggtgcaacttgacctctgtcccg
acagaggccttcacgcacctgcacagcttggtcacgctgcgcttacgaaacctcaacatc
aacagtatcagagactacagcttcaagcggctctaccgtctcaaagtgctggagatcgcc
aactggccctacctggataccatgaccactaactgcttatacggattgaatcttacctcc
ctaacgatcactaatgcaaacttgacatctattccatatttggccttgaggcacctggtt
tatcttcgtttccttaacatgtcctacaatcccattcagatgattgagggcaaccggctc
catgacctgctcagactgcaggagttgcatctggtaggcggtcgactgatgatgattgaa
ccctattcctttagaggtctgaactacctgaaaatcctcaatgtgtccagcaactccctt
accaccctggaggagtctgtgttccattcggtggggaacctggagaccctcgcactgtac
gacaacccactggcttgtgactgccgtctgctttgggttttccgacgccgctggaggctc
aactttaaccgacagcagccaacttgctcctcacccgagtttgttcagggaaaagagttc
aaggactttcctgatgtgctgcagcctaattacttcacgtgtcgcaagtccaggatccga
gaccggaaaccgcagcagaagttcgttgatgaaggtaccaccgtccacttcatctgccaa
gcagatggagacccgacacctgtcatcatgtggctttctccacaaaaacaatttatcact
acaagaacgataggacggctcactgttttcccggatggcaccttggaggtgcgctacgct
cagattcaggacaatgggacgtatgtgtgcattgctagcaatgcaggtggaaacgatacc
gctttggctcacctacatgtccacagttactctccagactggcccaaccaacccaacaaa
accttggcgtttatctccaaccaacccaatgacaacggagccaatggaacaagagcaaca
gtcccgttcccttttgatataaagacgctaatcattgccaccaccatgggcttcatctcc
tttttgggtgtggttctgttctgccttgttctgctctttctttggagcagaggcaaaggc
aacagcaaacacaacattgagatagagtacgtcccgcgcaaatcggatgctgggatgagc
agcagcggcaatgatggccctcggaaatttaacatgaaaatgatataa
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