Carassius gibelio (silver crucian carp): 127946653
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Entry
127946653 CDS
T08819
Name
(RefSeq) interferon phi 1 isoform X1
KO
K05414
interferon alpha
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04060
Cytokine-cytokine receptor interaction
cgib04217
Necroptosis
cgib04620
Toll-like receptor signaling pathway
cgib04621
NOD-like receptor signaling pathway
cgib04622
RIG-I-like receptor signaling pathway
cgib04623
Cytosolic DNA-sensing pathway
cgib05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
127946653
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
127946653
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
127946653
04621 NOD-like receptor signaling pathway
127946653
04622 RIG-I-like receptor signaling pathway
127946653
04623 Cytosolic DNA-sensing pathway
127946653
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
127946653
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
cgib04052
]
127946653
Cytokines and neuropeptides [BR:
cgib04052
]
Cytokines
Interferons
127946653
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Interferon
DUF4446
LAMB1
DOCK_C-D_N
Z1
Motif
Other DBs
NCBI-GeneID:
127946653
NCBI-ProteinID:
XP_052399319
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All DBs
Position
A3:11385006..11448136
Genome browser
AA seq
183 aa
AA seq
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MKQTQMWTYICVIFVTLLSQCSACRWLGRYRMVNADSLTLIEKMGGHPGTVKVRFPGHLY
NLIGDAKVEDQVRFLVLNLDQIINLMDSKEHMNPEQWKLVEYFLKDLHRQSSELKECVAQ
YQKPSHMESYEKKITRHFRTLKKSLKKKKYSSHAWEQIRRAVKTHIQRMEIIANNANKSL
ARV
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaaactcaaatgtggacatatatttgtgtgatatttgtaactctgctgagtcaa
tgctccgcttgcagatggctcggcagatacaggatggtgaacgccgattctctgacactg
attgagaaaatgggtggacatccagggactgttaaggtgcgatttccaggacacctgtac
aacttgattggagatgctaaggtggaggaccaggtgaggtttcttgtcttgaacttagat
cagatcatcaacctcatggattccaaagaacacatgaatccagagcaatggaaactagtg
gaatatttcctaaaagacctgcacaggcagtcatctgagctcaaagaatgtgtggcccaa
taccaaaagccgtcacatatggagtcatatgagaaaaagataacaaggcacttcaggact
ttaaagaagagtttaaagaaaaaaaaatatagttctcacgcatgggagcagatccggaga
gcggtgaaaacccacattcagaggatggagatcatcgcaaacaatgcaaacaagtccctg
gcaagagtttaa
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