Carassius gibelio (silver crucian carp): 127946689
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Entry
127946689 CDS
T08819
Name
(RefSeq) leucine-rich repeat-containing protein 4C-like
KO
K07523
netrin-G1 ligand
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
127946689
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
ig
LRR_14
V-set
LRR_9
Ig_2
LRRNT
DUF7617
Ig_6
Sp38
Syndecan
DUF6821
Motif
Other DBs
NCBI-GeneID:
127946689
NCBI-ProteinID:
XP_052399363
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All DBs
Position
A25:complement(4660179..4724293)
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AA seq
648 aa
AA seq
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MINKMTSSLMQQTMRGPRWNRSLSDPLFVLSLALQLLVVAGLVRAQTCPSVCSCSNQFSK
VICTRRGLRDVPDGISTNTRYLNLQENLIQVIKVDSFKHLRHLEILQLSKNHIRNIEIGA
FNGLANLNTLELFENRLTTIPNGAFEYLSKLKELWLRNNPIESIPSYAFNRVPSLRRLDL
GELKRLSYISEGAFEGLSNLRYLNLGMCNLKEIPNLIPLVRLDELEMSGNQLSIVRPGSF
KGLVHLQKLWMMHAQIQTIERNAFDDLQSLVELNLAHNNLTLLPHDLFTPLHHLERVHLH
HNPWNCNCDILWLSWWLKEMVPANTSCCARCASPTSHKGRYIGELDQNYFHCYAPVIVEP
PADLNVTEGMAAELKCRANSLTSVSWITPNGSIMTHGAYKVRISVLNDGTLNFTNVTMQD
MGTYTCMVSNSAGNTTASATLNVSSTENSSFSYFTTVTVETTEAAHDEGYPTVQPKGGPT
PSSGIWDTLPPSFTTTTTTTARTPLSTKATDKTYTIPVTALIDGSLNTLDEVMKTTKIII
GCFVAITLMAAVMLIIFYKMRKQHHQQNHHAPARTIEIINVDEDCVTGGPTMEGHLTLAP
LEHEHLNHYNAYKTAYSHASTINSIHSSAHEPLLIRASSKDNVQETQI
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgataaacaagatgacctcctccctgatgcagcagacgatgagaggtcctaggtggaat
cggtccctgtccgacccattgtttgtgctgtcactggccctgcagcttctggtggtggct
ggcctggtgcgagcccagacatgcccctcggtctgctcttgtagcaaccagttcagcaag
gtaatttgtacgcgacgtggccttcgagatgtacccgatggtatttccaccaacacaagg
tacctgaaccttcaggagaacctcatccaggtgatcaaggttgacagcttcaaacatcta
aggcacttggagatcctgcagctcagcaagaaccacatccgcaacattgaaatcggcgct
ttcaatgggctggccaacctcaacactctagaactcttcgaaaatcgtctaaccacaatc
cccaatggggctttcgagtacctgtccaaacttaaagagctttggttgaggaataaccct
attgagagtataccctcttatgccttcaaccgcgtaccatctctgcgaaggctggacttg
ggtgagctgaaaaggctctcgtatatctcagaaggtgcctttgaaggcctcagcaacctg
cggtacctgaacctgggcatgtgcaacttgaaggagatccccaacctcattccacttgtt
cgtttggatgagttggagatgtcaggaaaccagctgtctatagttaggccagggtctttc
aaaggcctcgtccacttacaaaaactgtggatgatgcatgcgcagatccagactattgaa
agaaatgccttcgatgatcttcagtcccttgtggagctcaatttggcccacaataacctt
acccttctgccccatgacctcttcaccccactacaccacttggagagggtgcacttgcat
cacaacccctggaactgcaactgtgacatcctctggctcagttggtggctaaaggaaatg
gtaccggccaataccagttgctgtgcccgctgtgcatcacctaccagccacaaagggcgc
tacattggcgaactcgaccagaactatttccattgttatgcaccggtgatcgtggagcca
ccagcagacctgaacgtgactgagggcatggcagcagaactcaaatgtagagcaaattcg
ttgacctcagtcagctggatcacacccaatgggtccatcatgacgcacggggcgtacaag
gtacgcatatccgtgctcaatgatgggactttaaactttaccaacgtcacaatgcaggac
atgggaacctacacttgtatggtgagcaactctgcaggcaacacgacagcctcggctaca
ctcaacgtgtcctcaacagagaacagcagcttcagttacttcactacagttactgtggag
actacagaagcggcacatgatgagggctaccctacggtacaaccgaagggtggccctact
ccttcttctggaatatgggacactttaccaccttccttcaccaccaccaccaccacaaca
gcacggacaccactgtccaccaaggctaccgacaagacctacacaatccctgtcacagcc
ctgattgacggctcactcaacaccttggatgaggtcatgaagactacaaagatcatcata
ggttgctttgtggcaatcaccctgatggccgctgtcatgctgatcatattttataaaatg
cgcaaacagcatcaccagcagaaccaccatgcaccggcacgaaccatcgagattatcaac
gtggatgaggattgtgtaacgggtggacctacaatggagggccacctcacccttgcccca
ctggagcatgagcacctgaatcattacaacgcctacaagactgcgtacagccatgcctcc
accatcaattctatacacagctctgcccacgaacctttattaattcgggctagctcaaaa
gacaatgtacaagaaacccagatctga
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