KEGG   Carassius gibelio (silver crucian carp): 127946816
Entry
127946816         CDS       T08819                                 
Name
(RefSeq) interferon regulatory factor 7
  KO
K09447  interferon regulatory factor 7
Organism
cgib  Carassius gibelio (silver crucian carp)
Pathway
cgib04620  Toll-like receptor signaling pathway
cgib04621  NOD-like receptor signaling pathway
cgib04622  RIG-I-like receptor signaling pathway
cgib04623  Cytosolic DNA-sensing pathway
cgib05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:cgib00001]
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    127946816
   04621 NOD-like receptor signaling pathway
    127946816
   04622 RIG-I-like receptor signaling pathway
    127946816
   04623 Cytosolic DNA-sensing pathway
    127946816
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    127946816
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:cgib03000]
    127946816
Transcription factors [BR:cgib03000]
 Eukaryotic type
  Helix-turn-helix
   Tryptophan clusters interferon-regulating factors
    127946816
SSDB
Motif
Pfam: IRF-3 IRF T2SS_PulS_OutS DUF4194
Other DBs
NCBI-GeneID: 127946816
NCBI-ProteinID: XP_052399550
LinkDB
Position
A25:14740999..14747024
AA seq 425 aa
MAAMQGSAIGKPQFGPWLIEQVESGKYEGLRMIGNDIFRIPWKHNSRRDLGDDDVKIFKA
WAVVSGKINEHPNDKAKWKTNFRCALHSLKNFEMLEDHSKDPDDQHKVYRIIRPQNHQEI
QNVEPVQLPFIPHLYSASNYISEEMEQDLLNQVGTMDLNEQHAESQAWNTCSQQIIPTSS
SNFYETLYSDVPCMPNNTPPPDQQPYTTGQQCNLPAFCDLEISINYRKTEVLKTRLCSPL
VQFHYQCDPSELRGEPIRFPSTEGLIDQKQIQFTKRILDSIQRGLQLEVNQYGIYGFRQD
QCKVFVSTSEPSEIQNPEPRKLHQNTREQLLSFDKYLRDLMDFKENRRGSPDYTIYLCFG
EKLPDGKPLEKKLITVKVVPLICRELHERAQMEGASSLLNENVSLQISHNSLFDLINSLG
LPSVA
NT seq 1278 nt   +upstreamnt  +downstreamnt
atggcagcgatgcaaggaagtgcaattggcaaacctcagtttggcccatggctcatagag
caggtggaaagtgggaaatatgagggattgcgcatgataggcaatgacatatttcggatc
ccctggaagcacaactcgcgaagagacctcggggacgacgacgttaaaatatttaaggca
tgggctgtggtcagtgggaagatcaacgagcaccctaacgacaaagcgaaatggaagaca
aatttccgttgtgcgcttcatagtctcaaaaactttgagatgttagaggatcactccaaa
gatccggacgaccaacacaaggtctatcgcatcatccgtcctcaaaaccaccaagagatc
cagaacgtagaaccagttcaacttccattcattcctcatctttacagtgcatctaattac
atatctgaagaaatggagcaggatttgctcaaccaggtggggacaatggatctaaatgaa
caacatgcagaatcccaagcatggaacacctgttcccaacaaatcattccgaccagctca
agcaacttctatgagactctctactccgatgtcccatgcatgccgaataacactcctccc
ccagaccagcagccctacaccacagggcagcaatgtaaccttccagctttctgtgacctg
gagatctcaatcaactacagaaaaacagaagttttgaaaactcgcctgtgttcgccgctc
gttcagtttcactaccagtgcgacccatcggagctgagaggggagccaatacgcttccca
tccaccgagggtctgattgaccaaaaacagatccagttcactaaacgcatcctggacagc
attcagagaggtctgcagctggaggtgaaccagtacggcatctacggcttccgtcaggac
cagtgtaaagtgttcgtcagcaccagcgagccgtctgagatccagaacccagagcccagg
aaactgcaccagaacaccagagagcaactgctcagctttgataagtacttaagagatctg
atggattttaaggagaacagacggggttctccggattacaccatctatctgtgctttgga
gagaagctcccagatggaaaaccactggagaagaaacttattactgtcaaagttgtacct
ctgatttgccgtgaacttcatgaaagagctcaaatggagggagcatcctctcttctcaat
gaaaacgttagcctgcagatctcccacaacagcctttttgacctcataaattctttgggt
ctgccttcagtggcctaa

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