Carassius gibelio (silver crucian carp): 127946816
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Entry
127946816 CDS
T08819
Name
(RefSeq) interferon regulatory factor 7
KO
K09447
interferon regulatory factor 7
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04620
Toll-like receptor signaling pathway
cgib04621
NOD-like receptor signaling pathway
cgib04622
RIG-I-like receptor signaling pathway
cgib04623
Cytosolic DNA-sensing pathway
cgib05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
127946816
04621 NOD-like receptor signaling pathway
127946816
04622 RIG-I-like receptor signaling pathway
127946816
04623 Cytosolic DNA-sensing pathway
127946816
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
127946816
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgib03000
]
127946816
Transcription factors [BR:
cgib03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
127946816
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
T2SS_PulS_OutS
DUF4194
Motif
Other DBs
NCBI-GeneID:
127946816
NCBI-ProteinID:
XP_052399550
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All DBs
Position
A25:14740999..14747024
Genome browser
AA seq
425 aa
AA seq
DB search
MAAMQGSAIGKPQFGPWLIEQVESGKYEGLRMIGNDIFRIPWKHNSRRDLGDDDVKIFKA
WAVVSGKINEHPNDKAKWKTNFRCALHSLKNFEMLEDHSKDPDDQHKVYRIIRPQNHQEI
QNVEPVQLPFIPHLYSASNYISEEMEQDLLNQVGTMDLNEQHAESQAWNTCSQQIIPTSS
SNFYETLYSDVPCMPNNTPPPDQQPYTTGQQCNLPAFCDLEISINYRKTEVLKTRLCSPL
VQFHYQCDPSELRGEPIRFPSTEGLIDQKQIQFTKRILDSIQRGLQLEVNQYGIYGFRQD
QCKVFVSTSEPSEIQNPEPRKLHQNTREQLLSFDKYLRDLMDFKENRRGSPDYTIYLCFG
EKLPDGKPLEKKLITVKVVPLICRELHERAQMEGASSLLNENVSLQISHNSLFDLINSLG
LPSVA
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgatgcaaggaagtgcaattggcaaacctcagtttggcccatggctcatagag
caggtggaaagtgggaaatatgagggattgcgcatgataggcaatgacatatttcggatc
ccctggaagcacaactcgcgaagagacctcggggacgacgacgttaaaatatttaaggca
tgggctgtggtcagtgggaagatcaacgagcaccctaacgacaaagcgaaatggaagaca
aatttccgttgtgcgcttcatagtctcaaaaactttgagatgttagaggatcactccaaa
gatccggacgaccaacacaaggtctatcgcatcatccgtcctcaaaaccaccaagagatc
cagaacgtagaaccagttcaacttccattcattcctcatctttacagtgcatctaattac
atatctgaagaaatggagcaggatttgctcaaccaggtggggacaatggatctaaatgaa
caacatgcagaatcccaagcatggaacacctgttcccaacaaatcattccgaccagctca
agcaacttctatgagactctctactccgatgtcccatgcatgccgaataacactcctccc
ccagaccagcagccctacaccacagggcagcaatgtaaccttccagctttctgtgacctg
gagatctcaatcaactacagaaaaacagaagttttgaaaactcgcctgtgttcgccgctc
gttcagtttcactaccagtgcgacccatcggagctgagaggggagccaatacgcttccca
tccaccgagggtctgattgaccaaaaacagatccagttcactaaacgcatcctggacagc
attcagagaggtctgcagctggaggtgaaccagtacggcatctacggcttccgtcaggac
cagtgtaaagtgttcgtcagcaccagcgagccgtctgagatccagaacccagagcccagg
aaactgcaccagaacaccagagagcaactgctcagctttgataagtacttaagagatctg
atggattttaaggagaacagacggggttctccggattacaccatctatctgtgctttgga
gagaagctcccagatggaaaaccactggagaagaaacttattactgtcaaagttgtacct
ctgatttgccgtgaacttcatgaaagagctcaaatggagggagcatcctctcttctcaat
gaaaacgttagcctgcagatctcccacaacagcctttttgacctcataaattctttgggt
ctgccttcagtggcctaa
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