Carassius gibelio (silver crucian carp): 127947002
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Entry
127947002 CDS
T08819
Name
(RefSeq) neogenin-like isoform X1
KO
K06766
neogenin
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04350
TGF-beta signaling pathway
cgib04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
127947002
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
127947002
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cgib04515
]
127947002
Cell adhesion molecules [BR:
cgib04515
]
Immunoglobulin superfamily
DCC/UNC5 family
127947002
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Neogenin_C
I-set
Ig_3
Ig_2
ig
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
V-set
Interfer-bind
fn3_2
NDNF
Motif
Other DBs
NCBI-GeneID:
127947002
NCBI-ProteinID:
XP_052399841
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All DBs
Position
A25:complement(1278121..1353595)
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AA seq
1405 aa
AA seq
DB search
MADPPRLLVCLASLVSLRFCAADQGSDIRGFTPFQFMVEPVDTLAVRGLPAVLNCSAASD
APVRVEWKKDGTFLNLVADDRKRQLADGSLLISTVVHSKHNKPDEGVYQCVATIDNLGTI
SSRTARLTVAGLPRFLSQPEDVSVRSGGTEMLSCEVTEDLVPFTRWERDGQPVELDSRVI
QLPGGALVISNGSQSDAGLYRCTIDGLGPAKTTEEAQLQVSADSGVEEELETLQGPVAMA
KVAGESVLLPCVMKGFPVPVIRWTFNDRPIDESRERFAVIGGGSLQIVNLTQEDAGIYVC
QADSGNMSSEIQAELTVHVPPRFLTRPSNTYAQESMDIIFECDVTGSPPPTVKWMKDGDT
VIPSDYFRMKQHNLQVLGLVKSDEGFYQCLAENDAGNIQASAQLIILDLDVALPSAVPSL
TDDMTDVASSASERSDLTPSAPRDVVASLVSTRFIKLTWRLPAEPHGENITYSVFYSLEG
TNRERVENTSGPGEMQVTIQNLVPDTRYTFRVVASNANGPGKSSTPLTLATQPEVQVPGP
APNLQVVSVSSSSVTLSWDRPVTGHGEILTYRLFYSEKSRAEEQQVDVPAPSCTVTGLKA
FTEYSFRVVGYSRHGPGVSTEDAVVQTLSDVPSAPPLNLTLEVLNSTSIMVRWQPPPAGA
VNGDVTGYKIRFRKGPRRADAVEMWSTQLFQILQGLERGQLYSVRVSASTVNGSGPASDW
STAETFQNDLDESQVPGVPSSLQVRPLVNRIVVSWTPPGNQEVLVRGYKMGYGIGSPHAH
TVSLDYKQRFYSIDDLDPSSHYVITLKAFNNMGEGIPIYNSATTRPQTDPIDPDIDFYEL
FNNPYTPAPDPAPMLPPVGVQATVLSHDSVKVSWADNSLAKNQKITDSRYYTIRWKTNIP
ANTKYKMANTTTLFHTVTSLKPNTLYEFSVMVTKSRRSSTWSMTAHGTTFESIPSSAPKD
VTVISKEGSPRIINISWQPPTEANGKITGYIIYYSTDVSAEVHDWVVEPVLGNRLTHQIQ
GLTLDTTYFYKIQARNSRGMGPMSDAVQFHSPKAEPSDEMSSDQGLQVKSGPPTPPEHGI
GSNMDKAGIRGSQEKHVLVMVVIVSVGVFTIIAVIVGAVLCTRRSNSLQKNVFVLRKRAA
CKSSAGSHKYKGSSKELSPPDLWIHHERLELKPMDKSPEPNPVLTETPIPRTAQEPSHQR
RGQETEDSRRGVRPKMMMPSHSQPVINAHPIHSLDHLHHHHHHHYHLAPRGYLHHQISLR
APASPSSSSHTPPSAECVRNQAPAPEAPVAPGQPHTTADLQKTETLIGEEPSTHPLKSFA
VPTITVSAHTPPPYETALPSTPLGPGVKTASVGTLIRARAPMAVTVPSAPDQSESSMMLD
STDELSEEMAHLEGLMKDLNAITTD
NT seq
4218 nt
NT seq
+upstream
nt +downstream
nt
atggcagaccccccacggctgctcgtgtgtctcgcgagtctcgtctctctccggttctgc
gcggcggatcaaggttcagatattcgaggctttaccccgttccagttcatggttgaaccc
gtcgacacgctggctgtacgcggcctcccggcggtcctgaactgctcggccgctagcgac
gctccggtgagggtggaatggaagaaggatgggacgttcctgaacctggtagcggacgac
cggaagcggcagcttgccgacggctctttgctcatcagtacggtggtccactccaaacac
aataagcctgacgagggggtgtaccagtgcgtggccaccatcgacaatctgggcaccatc
agcagccgaaccgcacgcctcacagtggcaggacttcctcggttcctcagtcagccggag
gatgtgtctgtgcgctcgggtggcactgagatgctgagctgcgaggtgactgaagatctg
gtcccgttcacccgctgggagagagacggtcagcccgtggagctggacagcagggtcata
cagctgcccggaggagctctggtcatcagcaacggctcccagagcgacgccggactctac
cgctgcaccatagacggcctgggaccggccaaaaccacagaggaggcacaactacaggtg
tctgcagattcgggtgttgaagaagagctggagactctccagggccctgttgctatggcg
aaggttgccggggagagcgtgttgttgccgtgcgtcatgaaggggttccccgtgcctgtg
attcgctggacgtttaacgaccggccgattgacgagagccgtgagcgttttgctgtgatt
ggtggaggaagcctgcagatcgtcaacctgacccaagaggatgctgggatatacgtctgt
caggcggacagcggaaacatgagcagcgagatccaggccgagctcacggtgcacgttcct
cctcggttcttgacgagaccctccaacacttacgcccaggagtccatggacatcatcttt
gagtgtgatgtcaccgggtcaccgccgcccaccgtcaagtggatgaaggatggagacacg
gtcattcccagtgattatttcaggatgaagcagcataacttgcaggttttgggtttagta
aaatcagatgaaggtttttatcagtgtttagcggagaacgacgctgggaacatccaggcc
agcgctcagctgatcatactggatttagacgttgcccttccttctgctgtcccttccctg
accgatgacatgactgatgtagcgtccagcgcgtccgagcgcagcgacctgacgccctcc
gcccctcgtgatgtcgtggcatctctagtgtccactcggttcatcaagctgacgtggcga
cttcctgccgagccacacggggagaacatcacctactctgtgttctacagtctggaaggc
actaacagggagcgtgtggagaacaccagcgggccgggagagatgcaggtcaccatccaa
aacctcgtcccagacaccaggtacacctttcgggtggtcgcgtccaacgctaacggcccg
ggcaagagctccaccccgctaacactggccacccagccggaggttcaggtcccgggtccg
gctccgaatctgcaggtggtctctgtcagctcgtcctcggtcactctgagctgggacaga
ccggtgaccggacacggagagatcctgacctacagactcttctacagcgagaagagccga
gccgaggagcagcaggtggacgtcccggctccgtcctgcacggtgacggggctcaaggcg
tttacagagtacagtttcagggtggtggggtacagcagacacggccccggcgtctccacc
gaggatgctgtggtccagacgctgtctgacgtgccgagcgcccccccactgaacctcact
ctggaggtcctgaactcaacgagcatcatggtccgatggcagccgccccccgcaggtgct
gtgaacggagatgtgacggggtataagatacgcttcaggaaaggtccgaggagagcagac
gcagtggagatgtggagcacacagctcttccagatcctccagggtctggagagaggacag
ctgtacagtgtgagagtgtcggccagcaccgtgaacggatctggaccggcgagcgactgg
agcacagccgagaccttccagaacgacctggacgagtctcaggttccaggagtccccagt
tctcttcaggttcgtccgctggtgaaccgaatcgtggtgagctggactcctccaggaaat
caggaggtgttagtgcgaggttataagatgggatacgggatcggcagccctcacgcgcac
acggtcagtctggattacaagcagcgcttctacagcatcgatgacctcgatcccagttcc
cattacgtcatcaccctcaaggctttcaacaacatgggcgaaggcattcccatctacaac
agcgccaccaccagaccccagaccgaccccatagaccctgatattgatttctatgaactc
tttaataacccatacaccccagcacctgaccccgcacccatgctgcccccggtgggtgtc
caggccaccgtcctcagccacgactcggtcaaagtcagctgggccgacaactcactcgcc
aagaaccagaagatcaccgactccagatattacaccatccgctggaagaccaacatcccc
gccaacaccaaatacaagatggcgaacaccacgaccctgttccatacggttacgtctctg
aaacccaacacgctttatgagttctccgttatggtcaccaagagccgcaggagcagtaca
tggagtatgacggcccacgggaccacctttgagtccattcccagctctgctccaaaagat
gtgaccgtgatcagtaaagagggaagtccacgaatcatcaacatcagctggcagcctccg
actgaagccaacggcaaaatcacagggtacatcatctactacagcactgatgtgagcgct
gaggtccatgactgggtggtggagcccgtgctggggaacagactgacccatcagatccag
gggctgacgctggacaccacgtacttctataagatccaggccagaaactccagaggcatg
ggacccatgtcagacgcggtgcagttccacagccctaaagcagaaccatcagacgagatg
tccagtgatcaagggctgcaagtcaaatccggtcccccgacccccccggagcacgggatc
ggatcaaacatggataaagcaggcatccgcggcagccaggagaagcatgttctggtgatg
gtggtgattgtgtctgttggtgtgttcactatcatcgctgtgatcgtgggagccgtcctg
tgcacacgccgctccaactccctccagaagaatgtgtttgttctcaggaagcgagcggcc
tgtaagtccagcgctggttcacacaagtacaagggttcatctaaagagctgagtcctcct
gatctgtggatccatcacgagcgtctggagctcaaacccatggacaaatcccccgagccc
aaccccgtcctgacagagacccccatcccacggaccgcccaggagccgtcccatcagaga
cggggtcaagagacggaggacagtcggaggggagtgagacccaagatgatgatgccgtcc
cactctcagcctgtgattaacgctcaccccatccattccctcgatcatcttcatcaccat
catcatcatcactatcacctggcgccgcgtggctaccttcatcaccagatcagcctgaga
gcacctgcctccccgagctcttcctcacacactcctccgtctgcagaatgtgtgaggaat
caggcccctgcacctgaagctccggtggcccccggtcagccccacactacagcggatcta
cagaagacagagacgctgatcggagaagagccgagcacacacccactcaagagcttcgcc
gtgccaaccatcactgtttccgcccataccccgcccccctacgagaccgcgttacccagc
acccctctggggcctggtgtgaagacagcgtctgtcgggacattaattcgagctcgagct
ccgatggcagtaacagtccccagtgctcctgaccaatcagaaagcagcatgatgctggac
tcgacggatgaactctcagaggagatggcccacctggagggtctgatgaaggacctgaac
gccatcaccacggactga
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integrated database retrieval system