KEGG   Carassius gibelio (silver crucian carp): 127947002
Entry
127947002         CDS       T08819                                 
Name
(RefSeq) neogenin-like isoform X1
  KO
K06766  neogenin
Organism
cgib  Carassius gibelio (silver crucian carp)
Pathway
cgib04350  TGF-beta signaling pathway
cgib04514  Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:cgib00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04350 TGF-beta signaling pathway
    127947002
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    127947002
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:cgib04515]
    127947002
Cell adhesion molecules [BR:cgib04515]
 Immunoglobulin superfamily
  DCC/UNC5 family
   127947002
SSDB
Motif
Pfam: fn3 Neogenin_C I-set Ig_3 Ig_2 ig Pur_ac_phosph_N Ig_DSCAM-DSCAML_C V-set Interfer-bind fn3_2 NDNF
Other DBs
NCBI-GeneID: 127947002
NCBI-ProteinID: XP_052399841
LinkDB
Position
A25:complement(1278121..1353595)
AA seq 1405 aa
MADPPRLLVCLASLVSLRFCAADQGSDIRGFTPFQFMVEPVDTLAVRGLPAVLNCSAASD
APVRVEWKKDGTFLNLVADDRKRQLADGSLLISTVVHSKHNKPDEGVYQCVATIDNLGTI
SSRTARLTVAGLPRFLSQPEDVSVRSGGTEMLSCEVTEDLVPFTRWERDGQPVELDSRVI
QLPGGALVISNGSQSDAGLYRCTIDGLGPAKTTEEAQLQVSADSGVEEELETLQGPVAMA
KVAGESVLLPCVMKGFPVPVIRWTFNDRPIDESRERFAVIGGGSLQIVNLTQEDAGIYVC
QADSGNMSSEIQAELTVHVPPRFLTRPSNTYAQESMDIIFECDVTGSPPPTVKWMKDGDT
VIPSDYFRMKQHNLQVLGLVKSDEGFYQCLAENDAGNIQASAQLIILDLDVALPSAVPSL
TDDMTDVASSASERSDLTPSAPRDVVASLVSTRFIKLTWRLPAEPHGENITYSVFYSLEG
TNRERVENTSGPGEMQVTIQNLVPDTRYTFRVVASNANGPGKSSTPLTLATQPEVQVPGP
APNLQVVSVSSSSVTLSWDRPVTGHGEILTYRLFYSEKSRAEEQQVDVPAPSCTVTGLKA
FTEYSFRVVGYSRHGPGVSTEDAVVQTLSDVPSAPPLNLTLEVLNSTSIMVRWQPPPAGA
VNGDVTGYKIRFRKGPRRADAVEMWSTQLFQILQGLERGQLYSVRVSASTVNGSGPASDW
STAETFQNDLDESQVPGVPSSLQVRPLVNRIVVSWTPPGNQEVLVRGYKMGYGIGSPHAH
TVSLDYKQRFYSIDDLDPSSHYVITLKAFNNMGEGIPIYNSATTRPQTDPIDPDIDFYEL
FNNPYTPAPDPAPMLPPVGVQATVLSHDSVKVSWADNSLAKNQKITDSRYYTIRWKTNIP
ANTKYKMANTTTLFHTVTSLKPNTLYEFSVMVTKSRRSSTWSMTAHGTTFESIPSSAPKD
VTVISKEGSPRIINISWQPPTEANGKITGYIIYYSTDVSAEVHDWVVEPVLGNRLTHQIQ
GLTLDTTYFYKIQARNSRGMGPMSDAVQFHSPKAEPSDEMSSDQGLQVKSGPPTPPEHGI
GSNMDKAGIRGSQEKHVLVMVVIVSVGVFTIIAVIVGAVLCTRRSNSLQKNVFVLRKRAA
CKSSAGSHKYKGSSKELSPPDLWIHHERLELKPMDKSPEPNPVLTETPIPRTAQEPSHQR
RGQETEDSRRGVRPKMMMPSHSQPVINAHPIHSLDHLHHHHHHHYHLAPRGYLHHQISLR
APASPSSSSHTPPSAECVRNQAPAPEAPVAPGQPHTTADLQKTETLIGEEPSTHPLKSFA
VPTITVSAHTPPPYETALPSTPLGPGVKTASVGTLIRARAPMAVTVPSAPDQSESSMMLD
STDELSEEMAHLEGLMKDLNAITTD
NT seq 4218 nt   +upstreamnt  +downstreamnt
atggcagaccccccacggctgctcgtgtgtctcgcgagtctcgtctctctccggttctgc
gcggcggatcaaggttcagatattcgaggctttaccccgttccagttcatggttgaaccc
gtcgacacgctggctgtacgcggcctcccggcggtcctgaactgctcggccgctagcgac
gctccggtgagggtggaatggaagaaggatgggacgttcctgaacctggtagcggacgac
cggaagcggcagcttgccgacggctctttgctcatcagtacggtggtccactccaaacac
aataagcctgacgagggggtgtaccagtgcgtggccaccatcgacaatctgggcaccatc
agcagccgaaccgcacgcctcacagtggcaggacttcctcggttcctcagtcagccggag
gatgtgtctgtgcgctcgggtggcactgagatgctgagctgcgaggtgactgaagatctg
gtcccgttcacccgctgggagagagacggtcagcccgtggagctggacagcagggtcata
cagctgcccggaggagctctggtcatcagcaacggctcccagagcgacgccggactctac
cgctgcaccatagacggcctgggaccggccaaaaccacagaggaggcacaactacaggtg
tctgcagattcgggtgttgaagaagagctggagactctccagggccctgttgctatggcg
aaggttgccggggagagcgtgttgttgccgtgcgtcatgaaggggttccccgtgcctgtg
attcgctggacgtttaacgaccggccgattgacgagagccgtgagcgttttgctgtgatt
ggtggaggaagcctgcagatcgtcaacctgacccaagaggatgctgggatatacgtctgt
caggcggacagcggaaacatgagcagcgagatccaggccgagctcacggtgcacgttcct
cctcggttcttgacgagaccctccaacacttacgcccaggagtccatggacatcatcttt
gagtgtgatgtcaccgggtcaccgccgcccaccgtcaagtggatgaaggatggagacacg
gtcattcccagtgattatttcaggatgaagcagcataacttgcaggttttgggtttagta
aaatcagatgaaggtttttatcagtgtttagcggagaacgacgctgggaacatccaggcc
agcgctcagctgatcatactggatttagacgttgcccttccttctgctgtcccttccctg
accgatgacatgactgatgtagcgtccagcgcgtccgagcgcagcgacctgacgccctcc
gcccctcgtgatgtcgtggcatctctagtgtccactcggttcatcaagctgacgtggcga
cttcctgccgagccacacggggagaacatcacctactctgtgttctacagtctggaaggc
actaacagggagcgtgtggagaacaccagcgggccgggagagatgcaggtcaccatccaa
aacctcgtcccagacaccaggtacacctttcgggtggtcgcgtccaacgctaacggcccg
ggcaagagctccaccccgctaacactggccacccagccggaggttcaggtcccgggtccg
gctccgaatctgcaggtggtctctgtcagctcgtcctcggtcactctgagctgggacaga
ccggtgaccggacacggagagatcctgacctacagactcttctacagcgagaagagccga
gccgaggagcagcaggtggacgtcccggctccgtcctgcacggtgacggggctcaaggcg
tttacagagtacagtttcagggtggtggggtacagcagacacggccccggcgtctccacc
gaggatgctgtggtccagacgctgtctgacgtgccgagcgcccccccactgaacctcact
ctggaggtcctgaactcaacgagcatcatggtccgatggcagccgccccccgcaggtgct
gtgaacggagatgtgacggggtataagatacgcttcaggaaaggtccgaggagagcagac
gcagtggagatgtggagcacacagctcttccagatcctccagggtctggagagaggacag
ctgtacagtgtgagagtgtcggccagcaccgtgaacggatctggaccggcgagcgactgg
agcacagccgagaccttccagaacgacctggacgagtctcaggttccaggagtccccagt
tctcttcaggttcgtccgctggtgaaccgaatcgtggtgagctggactcctccaggaaat
caggaggtgttagtgcgaggttataagatgggatacgggatcggcagccctcacgcgcac
acggtcagtctggattacaagcagcgcttctacagcatcgatgacctcgatcccagttcc
cattacgtcatcaccctcaaggctttcaacaacatgggcgaaggcattcccatctacaac
agcgccaccaccagaccccagaccgaccccatagaccctgatattgatttctatgaactc
tttaataacccatacaccccagcacctgaccccgcacccatgctgcccccggtgggtgtc
caggccaccgtcctcagccacgactcggtcaaagtcagctgggccgacaactcactcgcc
aagaaccagaagatcaccgactccagatattacaccatccgctggaagaccaacatcccc
gccaacaccaaatacaagatggcgaacaccacgaccctgttccatacggttacgtctctg
aaacccaacacgctttatgagttctccgttatggtcaccaagagccgcaggagcagtaca
tggagtatgacggcccacgggaccacctttgagtccattcccagctctgctccaaaagat
gtgaccgtgatcagtaaagagggaagtccacgaatcatcaacatcagctggcagcctccg
actgaagccaacggcaaaatcacagggtacatcatctactacagcactgatgtgagcgct
gaggtccatgactgggtggtggagcccgtgctggggaacagactgacccatcagatccag
gggctgacgctggacaccacgtacttctataagatccaggccagaaactccagaggcatg
ggacccatgtcagacgcggtgcagttccacagccctaaagcagaaccatcagacgagatg
tccagtgatcaagggctgcaagtcaaatccggtcccccgacccccccggagcacgggatc
ggatcaaacatggataaagcaggcatccgcggcagccaggagaagcatgttctggtgatg
gtggtgattgtgtctgttggtgtgttcactatcatcgctgtgatcgtgggagccgtcctg
tgcacacgccgctccaactccctccagaagaatgtgtttgttctcaggaagcgagcggcc
tgtaagtccagcgctggttcacacaagtacaagggttcatctaaagagctgagtcctcct
gatctgtggatccatcacgagcgtctggagctcaaacccatggacaaatcccccgagccc
aaccccgtcctgacagagacccccatcccacggaccgcccaggagccgtcccatcagaga
cggggtcaagagacggaggacagtcggaggggagtgagacccaagatgatgatgccgtcc
cactctcagcctgtgattaacgctcaccccatccattccctcgatcatcttcatcaccat
catcatcatcactatcacctggcgccgcgtggctaccttcatcaccagatcagcctgaga
gcacctgcctccccgagctcttcctcacacactcctccgtctgcagaatgtgtgaggaat
caggcccctgcacctgaagctccggtggcccccggtcagccccacactacagcggatcta
cagaagacagagacgctgatcggagaagagccgagcacacacccactcaagagcttcgcc
gtgccaaccatcactgtttccgcccataccccgcccccctacgagaccgcgttacccagc
acccctctggggcctggtgtgaagacagcgtctgtcgggacattaattcgagctcgagct
ccgatggcagtaacagtccccagtgctcctgaccaatcagaaagcagcatgatgctggac
tcgacggatgaactctcagaggagatggcccacctggagggtctgatgaaggacctgaac
gccatcaccacggactga

DBGET integrated database retrieval system