Carassius gibelio (silver crucian carp): 127947005
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Entry
127947005 CDS
T08819
Name
(RefSeq) uncharacterized protein LOC127947005
KO
K10275
F-box and leucine-rich repeat protein 9
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgib04121
]
127947005
Ubiquitin system [BR:
cgib04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
127947005
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_4
LRR_6
F-box-like
F-box
LRR_Zer-1
LRR_RPS2
F-box_5
LRR_EndoS
LRR_NXF1-5
LRR_At1g61320_AtMIF1
SAM_Ste50p
Motif
Other DBs
NCBI-GeneID:
127947005
NCBI-ProteinID:
XP_052399850
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All DBs
Position
A25:complement(7735793..7740935)
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AA seq
644 aa
AA seq
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MESPHLPAEIISYIMSFLHVTDRKEASLVCKSWYDACQDHQFQKNVTFKFPVSTSSLDFI
RAVARRPRCGLVISHLDGSRLSRQVLLEVGLHLGPRLDRLALPGSSITEASLLGLLPHLT
GLRKLDLQGLDSLFMSGAFLSREEHRRQVQNALRNLEELDLSDLRYLSDLSFNRLTSCTP
RLCILSLAGCHIAFEFDPYRGCPVGFGSSALVSLRNLLSLLQKQASTLHSLDLSRTSITP
ESLRSIAQVPGLHLEELSLHGCKELTDYSMEILCKHQNGLKRLDLSTCTELTSRTVLAVA
TELKELRSLSLSQDWKITDKGLAKLMMLPCLRSLDLSECLHVSGADLVKGLSSPQPRAQL
ETLSLRSCAYIRDAVIISLTQLLSRNLRELDLTSCVCLTDLSVHAIATYLPALVVLRLGW
CKEISDWGLLGMVEPTKVCDPRDKEEDKGPSFTRTFGNMGFFQPPSLPFQEKPRLVTEED
LGAFRDQEGASLLALRGLQELDLSACSRLTDTSITQVLRFPDLQRLSLSMLPEISDDSLV
SVAHHCRSLTSLALSHCPQISDQGMARALPLLHRLQHLFLAGCDMVTNETLTIIALHCDR
LRTLDVSMCKDITVHQVDLLQFRLPFLEKVQCRIASGADFTMVL
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atggagagtccacatctacctgctgagataatttcctatataatgagtttccttcatgtg
acggatcgaaaggaggcgtctctagtctgtaagagttggtacgatgcatgccaagaccac
cagtttcagaaaaatgtcaccttcaagttccctgtttccacatcttcactggacttcatc
cgtgcagttgcaaggcgccctcgctgtggcctagtcattagccatcttgatggatccaga
ctgtcaagacaagtactcttggaggtggggcttcacctcggccctcgcttggacaggttg
gctctacctggcagcagcatcacagaggcctcactgctgggcctcctaccacatctgacc
ggcctgcgcaagctggaccttcaggggctggacagcctcttcatgtctggagcttttcta
tctagagaggagcaccgtcgacaggtccagaacgctttgagaaacctggaggaactggac
ctgtctgatctgcgctacctctcagacctctctttcaaccgcctgacgagttgcacaccc
aggttatgcattctgtccctggctggatgtcacattgctttcgagttcgacccataccga
ggttgcccggttgggtttggctcttccgctctagtttccctccgtaacctcctgagtctc
ttgcagaagcaggcctccacgctccacagcctggacctgagtcgcaccagcatcactcca
gagtcgctccgctccatagctcaggtgcccggtctgcatctggaggaactgagtctacac
ggctgtaaagagctgacggactactccatggaaatcctctgcaagcaccagaacggtctg
aagaggctggacctcagcacgtgtactgagttaaccagtaggacggtgctggctgtggcc
actgagctgaaggagctgcggtcgctgtcactctcacaggactggaagattacagataaa
ggcctggctaagctgatgatgctgccatgcttgaggagtctggatctgtcggagtgcctg
catgtcagtggtgcagacctggtgaagggattgtcctctccacagcccagggcacagctg
gagaccctgagccttagaagctgcgcttacataagggatgcagtcattatctccctgacg
cagctgctcagccgtaacctgagagagctggatctcacatcctgcgtctgcctcactgac
ctgagtgttcatgcaatcgcaacgtacctgcctgcgctggtggtgctgcggctcggctgg
tgcaaagagatctctgattgggggctgctgggaatggtggaacccaccaaagtttgtgat
ccaagagacaaagaggaggataaaggcccaagctttactaggacgtttgggaacatgggc
tttttccagcctcccagcctgcctttccaggagaagccacgtctcgtgactgaagaggac
ctcggggcctttagggatcaggagggagcatcgcttttggccctcaggggtcttcaggaa
ctggacctgtcggcctgctccaggttaacggacaccagtatcacacaggttctccgtttc
ccagacctgcaacgcctctcgctttctatgctgcctgagatcagcgatgacagcttggtg
tccgtagcccatcactgccgcagcctcaccagcctggcgctcagccactgtccccagatc
agtgaccagggcatggcacgggcccttccgctcctccacagactgcagcatctgttcctg
gctggctgtgacatggttacgaacgaaactcttaccataattgcactgcactgtgaccga
ctccggaccctcgatgtgtccatgtgcaaagacataacagtgcaccaggtggacctcctc
cagttccgactgcctttcctcgagaaagttcagtgtcgcattgcaagtggcgcagatttt
actatggtactatga
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