Carassius gibelio (silver crucian carp): 127947097
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Entry
127947097 CDS
T08819
Name
(RefSeq) nucleolar transcription factor 1
KO
K09273
upstream-binding transcription factor
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgib03000
]
127947097
03021 Transcription machinery [BR:
cgib03021
]
127947097
Transcription factors [BR:
cgib03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
UBF
127947097
Transcription machinery [BR:
cgib03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
UBF
127947097
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_5
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
127947097
NCBI-ProteinID:
XP_052400002
LinkDB
All DBs
Position
A3:12680841..12692509
Genome browser
AA seq
738 aa
AA seq
DB search
MNGEMDSSAKEPVWEQDDLLKLLDAMKVNLPEKDLAKYKTSESHLDWEKVAFNSYSGEMC
KQKWHEVSREIRKFRTLTELIVDAQDYVKNPYKGKKLKKHPDFPKKPLTPYFRFFMEKRA
KYAKLHPEMSNLDLTKILSKKYKELPERKKEKYVNDFLREKETFMLSMMKFKQDHPDLVE
NVNKKSNVPEKPKTPQQLWYSHEKKAFLKAHPDATTKDIKDSLGKQWPQLSDKKRIKWIT
KSLEQKKLYEQKMREFVQQHPEMNITEENIVKSTLTKAERQLKDKFDGRPDKPPSNGYSM
FCAELMSSMKDVPSTERMVMCSQRWKLLKQNEKDAYQKRCEQKKKEYEVEMNRYLLSISE
EEQQRILSEQKMGSFKKGGGGSSPASKKKNSKAKSSTEKPKPPVSAMFIFSEEKRPKLQE
ERPDLTDMELTRLLARMWSELSDKKKEKYKNLEMTLKAESEKQSKEDKGKRPETPKTAQE
IWQQSVIGDYLARFKNDRTKAQKAMEATWNTMEKKEKIMWIKKAAEDQKRYERELSEMRS
PAPVITPGKKMKFDGEPKKPPSNGYQKFSQEMLSNGELNHLPMKERMGEIGGRWQRLPQK
EKDRYKRLAEEKQRQYKVLLEQWLAGLSSQEKATYKEYNSLKRRSTSKPGATAAKVKPKA
KQSDEDDDDDDDDDDDEDKESDDESSSDDSDDDDDDDDDDDDDDNEDIEDEEVEDKENKS
ESSSSASSSDDSSGSDSD
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgaatggagaaatggactcctctgctaaagaacccgtttgggagcaggatgatctgttg
aagctgttggatgccatgaaggtgaacctaccagaaaaagatctggccaagtacaagacg
tccgagtcccatttggactgggagaaagtggctttcaactcgtactctggggagatgtgc
aaacagaaatggcatgaagtgtcacgtgagattcgcaaatttcgcacccttactgagctg
atcgtggatgcgcaagactacgtcaaaaatccatacaaaggaaagaagctgaagaagcac
ccagacttccccaaaaagccgctgaccccatatttccgtttctttatggagaagcgtgcc
aagtatgctaaactacatccagagatgagcaacctagatctcacaaaaatcctgtccaaa
aagtacaaggagctcccagagcgtaaaaaagagaaatatgtgaatgactttctcagagaa
aaggagacgtttatgctcagcatgatgaagttcaagcaagatcatcccgaccttgttgag
aacgttaacaagaagtccaatgttccagagaagcccaagacgccccagcagctgtggtac
agccatgagaagaaggcctttctcaaagcacacccagatgcgactaccaaagacatcaag
gacagtcttggcaagcagtggccacagctctcagacaagaagaggataaagtggatcaca
aagtctttggagcagaagaaattgtatgagcaaaagatgcgtgagtttgtccagcagcac
ccagagatgaacatcacggaggagaacatcgtcaaatccactctgaccaaagcagagaga
cagctcaaggacaagtttgatgggcggccagacaaaccgccttctaatggttattctatg
ttctgtgctgagctgatgtccagtatgaaagatgttcccagcacagagcgtatggtcatg
tgcagccagcgctggaaactgctcaaacagaacgagaaagatgcctaccaaaagcgctgt
gagcagaaaaagaaagaatatgaagttgagatgaatcgttacctattaagtatctcagag
gaggaacagcagagaatactgtcagaacagaagatgggcagctttaaaaagggaggtgga
ggcagtagtccagcttccaaaaagaagaactcaaaagcaaagtccagtacagagaagccc
aagcctcctgtgtccgcaatgtttattttttctgaggagaagcgcccaaaacttcaagag
gaacggcctgatcttactgacatggagctcaccagactactggcccgcatgtggagcgaa
ctttctgacaagaagaaggagaagtataaaaacctggagatgacgctgaaggcagaatct
gaaaaacagagcaaagaagacaaagggaaacgaccagaaacacccaaaacggctcaggaa
atctggcaacaaagcgtcattggcgactatcttgcccgattcaagaatgatcgcacgaaa
gctcaaaaagccatggaggccacctggaacaccatggagaagaaagagaagatcatgtgg
atcaagaaggctgcagaggaccagaagagatacgaaagagagctgagtgagatgcgatcg
cctgccccagtcatcacccccgggaagaaaatgaaatttgatggggaacctaagaaaccg
ccctcgaacggttatcagaagttctctcaggagatgctgtcaaacggcgagctgaatcat
ctgcccatgaaagagcggatgggtgaaatcggaggacgctggcagcggctgcctcagaaa
gagaaggaccgttacaaaagactggcagaagagaagcagaggcagtacaaagtgctcctc
gagcagtggcttgcgggtttatcatcacaagagaaagctacatataaagaatataattct
ctgaaacggaggagcacatcaaaaccaggtgccactgctgctaaagtgaaacccaaggcc
aaacaatcagatgaggacgatgatgatgacgatgacgatgatgatgacgaggataaggaa
tctgatgacgaatcatcctctgatgacagtgatgatgatgatgatgacgacgacgacgac
gatgatgatgataatgaagacatagaggatgaagaggtcgaggataaagagaataagtca
gaaagcagcagcagcgcttccagctctgacgattcatcgggttcagactccgattga
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