Carassius gibelio (silver crucian carp): 127947213
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Entry
127947213 CDS
T08819
Name
(RefSeq) integrin beta-3-like
KO
K06493
integrin beta 3
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03266
Virion - Herpesvirus
cgib04081
Hormone signaling
cgib04145
Phagosome
cgib04148
Efferocytosis
cgib04510
Focal adhesion
cgib04512
ECM-receptor interaction
cgib04810
Regulation of actin cytoskeleton
cgib04820
Cytoskeleton in muscle cells
cgib05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
127947213
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
127947213
04512 ECM-receptor interaction
127947213
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
127947213
04148 Efferocytosis
127947213
09144 Cellular community - eukaryotes
04510 Focal adhesion
127947213
09142 Cell motility
04820 Cytoskeleton in muscle cells
127947213
04810 Regulation of actin cytoskeleton
127947213
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
127947213
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgib04131
]
127947213
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cgib04147
]
127947213
04515 Cell adhesion molecules [BR:
cgib04515
]
127947213
04090 CD molecules [BR:
cgib04090
]
127947213
Membrane trafficking [BR:
cgib04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
127947213
Exosome [BR:
cgib04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
127947213
Cell adhesion molecules [BR:
cgib04515
]
Integrins
Integrin beta subunits
127947213
CD molecules [BR:
cgib04090
]
Proteins
127947213
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
Integrin_B_tail
I-EGF_1
EGF_integrin
PSI_integrin
EGF_2
EGF_TEN
EGF_Teneurin
vWA_SIBA-E
Motif
Other DBs
NCBI-GeneID:
127947213
NCBI-ProteinID:
XP_052400153
LinkDB
All DBs
Position
A3:complement(12823568..12833582)
Genome browser
AA seq
780 aa
AA seq
DB search
MRLNLLEVWMPILLLISIAACSNICTSRGVRTCRECLSIHPSCAWCSQEVFGKGGSSLFR
CGPRDGLLQSGCGVKFIEFPVSSMRILENVPLSDRAGGSDEITQIQPQKIHLTLRPDDSK
KFTVTVKQTADYPVDLYYLMDMTNTMRDDLHKLQTLGKDLVSALRVVTSNLRMGFGAFVD
KPLAPYMYTYPEKAIQNPCYKSPESCPPQFGYRNVLSLTEQVERFTEEVKKQKVSRNRDD
PEGGFDAIMQAVVCKDKIGWRPDASHLLIFTSDGKSHLALDARLAGIVQPHDGECHINNN
NEYDKSTILDYPSLGMITDKLSENDINLIFAVAKYMIPLYSNYSELIPGSAVGTLSRDSG
NVVHLILDAYAKIRSKVELELLGVPDELSLFINATCLDGKEIAGVRSCAGLKIGDMVSFS
IEAKLHSCPKEKSRTFKVKPIGFKDILQVTVDFACGCDCQQSSIPASPSCHHGNGTLECG
MCLCNPGRLGARCECSEDEYKPTQQDSCSPDTAALVCSGRGDCVCGQCVCRSTDFGKVWG
PYCECDDFSCLHSKEQMCSGNGECICGICHCSSGWSGESCDCSTHTDACMGSGGMLCSDR
GHCLCGVCECTQPGAYGPTCEKCPTCPDACSIKKECVECKHYKRGDLYEKNCNHVCRDEI
ELVDKLVFHKKNCSYKDEDDCIQNFQYYEDASGKSFLYLVKEPECPRGPDVLVVTLSVAG
AILLLGLAALLVWKLLITIHDRHEFAKFEEEKARARWEADNNPLYEGPASTFPNVAYRGR
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atgagactaaatttgttggaagtttggatgccaattttacttctaatttccatagctgcc
tgctcaaacatttgcacttccagaggagtgagaacctgcagagaatgtttgtcgatacat
ccgagctgtgcctggtgctctcaggaggtctttggaaagggaggctcgagtttgttccgt
tgtggtccccgagacggtctccttcagtctggttgtggcgtgaagtttattgagtttcca
gttagcagcatgaggatactggagaacgtacccctgagtgacagggcagggggttcagat
gaaatcactcagatccaaccacaaaaaatccacctgaccctcaggccagacgattcaaag
aaattcactgtcactgtgaagcaaacggctgattacccagtggacctgtactacctgatg
gacatgaccaataccatgagggacgacctgcataagcttcaaacactgggcaaagatctg
gtcagtgctttacgggtcgtcaccagtaatctgcgcatgggatttggagcttttgtagac
aaaccgctcgcaccttacatgtacacttaccctgaaaaagccatccagaatccttgttat
aagtctcctgaatcctgcccaccacaattcggctaccgtaatgttctgtctctgacggag
caggtagagcggttcacggaggaagtgaagaaacagaaagtgtccagaaacagagatgac
cctgagggtggatttgatgctatcatgcaagcagttgtatgcaaggacaaaattggatgg
aggcctgatgcatctcatttgctgatcttcacaagtgatggcaaaagtcatttagctttg
gatgccaggctggctggaatcgtccagccccatgatggagagtgccacatcaacaacaac
aatgaatatgacaagtccactatactggactatccttcacttggtatgatcacggacaaa
ttatctgagaatgacatcaacctcatctttgctgtagccaagtatatgataccgttatat
agtaactacagcgagctgattcctggctctgcagtcggaacgctctccagagactctgga
aatgttgtgcatctcatcctggatgcatatgcgaagatcaggtctaaggttgagctggag
ctgctgggtgtgccggatgagttatctctgtttatcaatgcaacatgcctggatggaaag
gaaattgcaggggtccggtcatgtgctggactcaaaatcggagatatggtttcatttagc
atcgaggcaaaacttcacagctgccccaaagagaagagccggaccttcaaggtgaagcca
ataggctttaaagacatccttcaggtgactgtggactttgcttgtggatgtgactgtcag
cagtcttccatacccgccagcccctcctgtcaccacggcaatggtaccctggagtgtggc
atgtgcctgtgcaatcctggccgactgggggctcgatgcgagtgctctgaggatgaatat
aaacccacccaacaagacagctgtagtcccgacacagctgcgctggtgtgtagtgggcgc
ggagactgtgtgtgcggccagtgtgtctgtcgctcgactgattttgggaaggtttggggg
ccgtactgtgaatgtgatgacttcagctgcctccattccaaagaacaaatgtgttcaggc
aatggcgagtgcatctgtgggatctgtcactgtagctccgggtggtccggcgagagctgt
gactgttcgacccacacagacgcctgcatgggaagtggaggaatgctgtgtagtgatcgt
ggccactgtctgtgtggcgtctgtgagtgcacacaaccaggagcctatggaccaacctgt
gagaagtgtcccacctgcccagatgcctgctccatcaaaaaggagtgtgtggagtgtaaa
cattataagagaggggatctgtatgagaagaactgcaatcacgtctgcagagatgagatt
gagctggtggacaagctggtctttcataaaaagaactgcagctacaaggatgaggatgac
tgcattcagaacttccagtattatgaagatgccagtggaaaatccttcctctatcttgta
aaagaaccggagtgtcctaggggtcctgatgtcttggtggtcactctttcggttgctggt
gcgatcctgctgttgggactggctgcgctcctggtctggaagcttctgatcactattcac
gaccgtcatgaatttgccaaatttgaggaggagaaagccagagctagatgggaagcggat
aataatccactctacgaaggacccgccagcaccttcccaaatgtagcatatcgtggcagg
taa
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